Egretta garzetta (little egret): 104129834
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Entry
104129834 CDS
T05152
Symbol
EXOSC2
Name
(RefSeq) exosome complex component RRP4
KO
K03679
exosome complex component RRP4
Organism
egz
Egretta garzetta (little egret)
Pathway
egz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
egz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104129834 (EXOSC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
egz03019
]
104129834 (EXOSC2)
Messenger RNA biogenesis [BR:
egz03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
104129834 (EXOSC2)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
104129834 (EXOSC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRP4_S1
KH_6
ECR1_N
EXOSC1
RRP40_S1
Motif
Other DBs
NCBI-GeneID:
104129834
NCBI-ProteinID:
XP_035754130
LinkDB
All DBs
Position
Unknown
AA seq
268 aa
AA seq
DB search
LGLGLGLSSGGRSLRRGHGTYVDEEKFIASVAGAVERVNKLVCVKALKTRYNGEVGDIVV
GRITEVKQKRWKVETNSRLDSVLLLSSMNLPGGELRRRSAEDELAMRDYLQEGDLISAEV
QSVFSDGAVSLHTRSLKYGKLGQGVLVQVSPSLVKRQKTHFHDLPCGASVILGNNGFIWI
YPTPEQKDEEAGGFITNLEPVPLSDREVISRLRNCIVALVTQKLMLFDTSILYCYEASLP
HQIKDILKPEVMEEIVLETRQRLLDLEG
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
ctcgggctcgggctcgggctctcctcaggcggccgctctctccgcaggggccacggcacc
tacgtggacgaggagaagtttatcgcctcggtggccggcgccgtggagagggtgaacaag
ctggtgtgcgtcaaagcgctgaagaccaggtacaacggcgaagttggcgatatcgtggtc
gggaggatcacggaggtaaagcagaagcgatggaaggtggaaaccaattcccggctcgat
tcagttctgttgctgtcgtctatgaatttacctggtggggagctgagaaggagatcagca
gaagatgagcttgcaatgagggactatctgcaggaaggggacctcatcagtgcagaggtc
cagtctgtgttttctgatggggctgtatcactgcacacacggagtctgaaatatgggaag
cttggccagggtgtgcttgttcaggtctcgccctccctcgtgaaacgccagaagactcac
ttccatgacttgccctgtggtgcatccgtgatcctcggcaacaatggtttcatctggatc
tacccaactccagagcagaaagatgaagaggcagggggcttcatcaccaacttggagccg
gttcccttgtctgatcgggaggtgatatcacggctccgaaactgcattgtggctctggtt
actcagaagctgatgctctttgacaccagcatcctgtattgctatgaagcatcccttcct
catcagatcaaggacattctcaaaccagaggtgatggaggagatcgttctggaaacccga
cagaggctgctggatctggagggatag
DBGET
integrated database retrieval system
