Egretta garzetta (little egret): 104129922
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Entry
104129922 CDS
T05152
Symbol
RFC5
Name
(RefSeq) replication factor C subunit 5
KO
K10756
replication factor C subunit 3/5
Organism
egz
Egretta garzetta (little egret)
Pathway
egz03030
DNA replication
egz03410
Base excision repair
egz03420
Nucleotide excision repair
egz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
egz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
104129922 (RFC5)
03410 Base excision repair
104129922 (RFC5)
03420 Nucleotide excision repair
104129922 (RFC5)
03430 Mismatch repair
104129922 (RFC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
egz03032
]
104129922 (RFC5)
03036 Chromosome and associated proteins [BR:
egz03036
]
104129922 (RFC5)
03400 DNA repair and recombination proteins [BR:
egz03400
]
104129922 (RFC5)
DNA replication proteins [BR:
egz03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
104129922 (RFC5)
DNA Replication Termination Factors
ELG1-RFC complex
104129922 (RFC5)
Chromosome and associated proteins [BR:
egz03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
104129922 (RFC5)
DNA repair and recombination proteins [BR:
egz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
104129922 (RFC5)
Check point factors
HRAD17(Rad24)-RFC complex
104129922 (RFC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
AAA_24
AAA_assoc_2
AAA_16
AAA_22
AAA_11
AAA_14
DEAD
AAA_5
DNAX_ATPase_lid
RuvB_N
AAA_30
DUF815
AAA_19
Gp44_lid
Thioredoxin_6
TIP49
UBA_Rad5
AAA_7
ATPase_2
Motif
Other DBs
NCBI-GeneID:
104129922
NCBI-ProteinID:
XP_035754265
LinkDB
All DBs
Position
Unknown
AA seq
350 aa
AA seq
DB search
MWHKGKSTQVKVHLKAPVAVDKSTLEKVHLKASAAVHEVMLEHLKACGHSPAPVQRFISE
DRLPHLLLYGPPGTGKTSPILACAKQLYREREFGSMVLELNASDDRGIDIVRGPILSFAS
TRTIFKKGFKLVILDEADAMTQDAQNALRRVIEKFTENTRFCLICNYLSKIIPALQSRCT
RFRFGPLTPELMVPRLQHVIQEEGVDVTEDGIKALVTLSNGDMRRALNILQSTTMAFGKV
TEENVYTCTGHPLKSDIANILDWMLNQDFSTAYRKIMELKTLKGLALQDILTEIHLFVHR
VDFPPSVRIQLLIKMADIEYRLAAGTSEKIQLSSLIAAFQVTRDLIVAEA
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgtggcacaagggtaagtccacgcaggtaaaggtccacctcaaagcaccagtggctgtg
gataagtccacgctggagaaggtccacctcaaagcctctgcggctgtgcatgaggtcatg
ctggagcacctcaaagcatgtggccatagccccgctccagttcagcggttcatcagcgag
gatcggttgcctcatcttcttctctacgggcctcccggtaccggtaagacgtcgcccatc
ctcgcctgcgccaagcagctctaccgggagcgggagtttggttccatggtgctggagctc
aacgcctccgatgaccggggtatcgacatcgtccgggggcccatcctgagtttcgccagc
accaggactatctttaagaaaggcttcaagctcgtcatcctggatgaagctgacgccatg
acccaggatgcccagaacgccctgaggcgagtgatcgagaagttcacagaaaacacccgc
ttttgcctcatctgcaactacctctccaagatcatccccgccttgcagtcccgctgcacg
cgtttccgctttggccccctcaccccggagctgatggtgccccggctgcagcacgtcata
caggaggagggggtggatgtgaccgaggatgggataaaggctctggtgaccctctcaaat
ggtgacatgcgcagagccctcaatatcttgcagagcaccaccatggccttcgggaaggtg
acggaggagaacgtctacacctgcacgggacaccccctcaagtctgacatcgccaacatc
cttgactggatgctgaaccaggacttttccactgcctatcgcaaaatcatggagctgaag
acgctgaagggcctggctctgcaggacatcctcaccgagatccacctctttgtgcacaga
gttgatttcccaccctcagtccgcattcagctgctgatcaaaatggcagacatcgagtac
cggctggctgctgggaccagtgaaaagattcagctgagctccctcattgcggctttccaa
gtcaccagggacctgatcgtggccgaagcctga
DBGET
integrated database retrieval system
