Egretta garzetta (little egret): 104129988
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Entry
104129988 CDS
T05152
Symbol
SOX2
Name
(RefSeq) transcription factor SOX-2
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
egz
Egretta garzetta (little egret)
Brite
KEGG Orthology (KO) [BR:
egz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
egz03000
]
104129988 (SOX2)
Transcription factors [BR:
egz03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
104129988 (SOX2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
104129988
NCBI-ProteinID:
XP_009641272
LinkDB
All DBs
Position
Unknown
AA seq
386 aa
AA seq
DB search
MYNMMETELKPPAPQQTSGGGTGNSNAAANNQKNSPDRVKRPMNAFMVWSRGQRRKMAQE
NPKMHNSEISKRLGAEWKLLSEAEKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKTLMKK
DKYTLPGGLLAPGTNTMATGVGVGATLGAGVNQRMDSYAHMNGWTNGGYGMMQEQLGYPQ
HPGLNAHNAAQMQPMHRYDVSALQYNSMTSSQTYMNGSPTYSMSYSQQGTPGMALGSMGS
VVKTESSSSPPVVTSSSHSRAPCQAGDLRDMISMYLPGAEVPEPAAPSRLHMSQHYQSAC
SSRGARGKRTPPLHTEHAIALKFSGAAFPRAAPEARSALCFRGSSLRSRPPPCVSGVFLL
AARDLAYLVPCVCETVSGPSARKQEV
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgtacaacatgatggaaaccgagctgaagcctcccgccccccagcaaacttcgggggga
ggcacgggcaactccaacgcggccgccaacaaccagaagaacagcccggaccgggtcaag
cgcccgatgaacgcgttcatggtgtggtcccgcgggcagcggcggaaaatggcccaggag
aaccccaagatgcacaactccgagatcagcaagcggctcggggcggagtggaaactttta
tccgaggcggagaagagacccttcatcgacgaagccaagcggctcagggctctgcacatg
aaggagcacccggattataaataccgaccccggaggaaaaccaagaccctcatgaagaag
gataagtacacgttgccggggggcttgctggcaccgggcaccaataccatggcgaccggg
gtaggggttggggccaccttgggcgctggggtgaaccagaggatggacagttacgcgcac
atgaacggctggaccaacgggggctatgggatgatgcaagagcagctcggctacccgcag
cacccgggcttgaacgcgcacaacgcggcgcagatgcagcccatgcaccgctacgacgtg
agcgccctgcagtacaactccatgaccagctcgcagacctacatgaacggctcgcccacc
tacagcatgtcctactcccagcagggcaccccgggcatggccctgggctccatgggctcg
gtggtcaagacggagtccagctccagcccccccgtcgtcacctcctcgtctcactccagg
gccccttgccaggccggggacctgcgggacatgatcagcatgtacctcccgggcgcggag
gtgccggagcccgcggccccgagcagactgcacatgtcgcagcactaccagagtgcttgc
tcaagtagaggagcacgagggaaacgtacgccaccgctccacacggaacacgcgatcgcg
ctgaaattcagcggcgccgcttttcctcgtgctgctccagaagcgaggagcgcgctttgt
tttcgtggttcctcgctgcgctcccggccccctccatgtgtttcaggcgtttttctgttg
gcagcacgagaccttgcttacctggtgccttgtgtgtgtgaaaccgttagcggtcccagt
gcccgaaaacaagaagtctga
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