Egretta garzetta (little egret): 104130124
Help
Entry
104130124 CDS
T05152
Symbol
DDX55
Name
(RefSeq) ATP-dependent RNA helicase DDX55
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
egz
Egretta garzetta (little egret)
Brite
KEGG Orthology (KO) [BR:
egz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
egz03009
]
104130124 (DDX55)
Enzymes [BR:
egz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104130124 (DDX55)
Ribosome biogenesis [BR:
egz03009
]
Eukaryotic type
Pre-60S particles
Helicases
104130124 (DDX55)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
CTT_SPB4
Helicase_C_2
SBF_like
SHOCT
AAA_22
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
104130124
NCBI-ProteinID:
XP_009641426
LinkDB
All DBs
Position
Unknown
AA seq
573 aa
AA seq
DB search
MTVCVFDIFNPASATIPLFMSNKDVAAEAVTGSGKTLAFVIPILEILLRREEKLKKMQVG
AIIITPTRELAIQIDEVLSHFTKHFPRFSQILLIGGRNPMEDVEKFKECGGNIIVATPGR
LEDLFRRKADGLDLASCVKSLDVLVLDEADRLLDMGFEASLNAILDFLPKQRRTGLFSAT
QTQEVENLVRAGLRNPVRISVKEKGVAASNTQKTPTRLENYYMICKADEKFNQLVHFLRQ
HKQEKHLVFFSTCACVEYYGKALESLIKQVKIMSIHGKMKHKRNKIFTEFRKLPGGILVC
TDVMARGIDIPEVHWVLQYDPPSSASAFVHRCGRTARIGNVGSALVFLLPMEESYINFLS
INQKCPMQEMKPQANVLDLLPKLKSMALADRAVFEKGMKAFVSYVQAYAKHECNLIFRIK
DLDFASLAKGFALLKMPKMPELRGKSFPDFTPVTVNTDSISFKDKNREKQRQKQLEQQRK
EREENGGKKKPIKNKAWSKQKAKREKKKKITAKRKREEGSDIEDEDMEELLNDTRLLKRL
KKGKISEEEFEKRVIGSQSRLKAETLADLKSEG
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgacggtttgcgtttttgacatctttaaccctgcatctgcaactattccgctcttcatg
agtaacaaagatgttgctgcagaagcggtaacaggcagtggcaaaaccttagcgtttgta
attcccatactggaaattctcctcagacgggaagaaaaattaaagaaaatgcaggttgga
gctataattatcacaccaacaagggaattagctattcaaattgatgaggtgctatcacat
ttcacaaaacacttcccaaggtttagtcagattcttttaattggtggtaggaatcccatg
gaagatgttgaaaagtttaaggaatgtggtgggaacatcattgtagctacacctggccgc
ttggaggatctgttcagaagaaaagcagacgggctggatctagcaagttgtgtgaagtct
ctggatgtgttggtattagatgaagcagacagacttctagatatgggctttgaagcaagt
ttaaatgccattctggactttttgcccaagcagagacggacaggtctgttctcagcaact
caaactcaagaggtggagaacctggtgagagcaggtctccggaatcctgtccgcatctca
gtgaaagagaagggagtagcagcaagcaatacacagaaaactccaacacgcctggagaac
tattatatgatctgcaaagcagatgaaaaatttaatcagctggtgcattttcttcgacag
cacaaacaggaaaaacatctagtctttttcagcacgtgtgcctgtgtggaatactatggg
aaggctttggaatccttaatcaaacaagtgaaaataatgagcattcatgggaaaatgaaa
cacaagcgtaacaagatttttactgagtttcggaagctcccaggtggcattttagtttgc
actgacgtgatggctcgtggcatagacattccagaagtacactgggttttacagtatgac
ccacctagcagtgcaagtgcctttgtgcatcggtgtggtcgaacagcgcgtattggcaac
gtaggcagcgcgcttgtatttttgcttcccatggaagaatcttacattaactttctctca
atcaaccaaaagtgtcccatgcaggaaatgaaaccacaggcaaacgtgttagatcttctt
ccaaaactgaagtctatggccctagctgacagggcggtgtttgagaaagggatgaaagca
tttgtgtcttacgtccaggcttatgccaaacatgaatgtaatctgatcttccgaataaaa
gatctggattttgctagccttgccaaaggttttgcattgttaaaaatgccaaagatgcct
gaactaagaggaaaaagttttccagactttactccagtcactgttaatacagactccatt
tcatttaaggataaaaatagagaaaaacagagacaaaagcaattagaacaacaaagaaaa
gaaagagaggagaatggagggaaaaagaaacccataaagaacaaagcctggtcaaagcag
aaagccaagagggagaagaaaaagaaaataacagctaaaaggaagcgtgaagagggttct
gatattgaagatgaagatatggaagagttgctgaatgacacaagactcttgaaaagatta
aaaaaaggaaaaatcagtgaagaagagtttgagaagagagtaataggcagccagagtaga
ctcaaagcagaaactcttgctgacttaaagtctgaaggttga
DBGET
integrated database retrieval system
