Egretta garzetta (little egret): 104130239
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Entry
104130239 CDS
T05152
Symbol
SF3B3
Name
(RefSeq) splicing factor 3B subunit 3 isoform X2
KO
K12830
splicing factor 3B subunit 3
Organism
egz
Egretta garzetta (little egret)
Pathway
egz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
egz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104130239 (SF3B3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
egz03021
]
104130239 (SF3B3)
03041 Spliceosome [BR:
egz03041
]
104130239 (SF3B3)
03036 Chromosome and associated proteins [BR:
egz03036
]
104130239 (SF3B3)
Transcription machinery [BR:
egz03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
104130239 (SF3B3)
Spliceosome [BR:
egz03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
104130239 (SF3B3)
Complex B
104130239 (SF3B3)
Complex C
U2 SnRNP specific factors
104130239 (SF3B3)
Chromosome and associated proteins [BR:
egz03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
104130239 (SF3B3)
TFTC complex
104130239 (SF3B3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_BBS7
Motif
Other DBs
NCBI-GeneID:
104130239
NCBI-ProteinID:
XP_009641559
LinkDB
All DBs
Position
Unknown
AA seq
1223 aa
AA seq
DB search
MFLYNLTLQRATGISYAIHGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFG
VIRSLMAFRLTGGTKDYIVVGSDSGRIVILEYQPSKNVFEKIHQETFGKSGCRRIVPGQY
LAVDPKGFCQLIGAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP
MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEPLEEHGNFLITVPG
GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF
FLAQTEQGDIFKITLETDEDMVTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHYLYQ
IAHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDELDSLSPILCCQIADLANEDT
PQLYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHVEDEFDAYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKRVNEWKTPG
KKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQ
RSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGTEKQDELGERGSI
GFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSW
LSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFP
LQYTPRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAA
AFLNENLPESIFGAPKAGNGQWASVIRVMNPIQGNTLDLVQLEQNEAAFSVAVCRFSNTG
DEWYVLVGVAKDLILNPRSVAGGFVYTYKLVNSGEKLEFLHKTPVEEVPAAIAPFQGRVL
IGVGKLLRVYDLGKKKLLRKCENKHIANYICGIQTIGHRVIVSDVQESFIWVRYKRNENQ
LIIFADDTYPRWVTTATLLDYDTVAGADKFGNICVVRLPPNTNDEVDEDPTGNKALWDRG
LLNGASQKAEVIMNYHVGETVLSXXXXXXLQKTTLIPGGSESLVYTTLSGGIGILVPFTS
HEDHDFFQHVEMHLRSEHPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMEPNKQKNVA
EELDRTPPEVSKKLEDIRTRYAF
NT seq
3672 nt
NT seq
+upstream
nt +downstream
nt
atgtttctctacaacctgacgttgcagcgcgccactggcattagctatgctatccatggc
aatttctcaggaaccaaacaacaagaaatcgttgtttcccggggcaagatcctggagtta
cttcgcccggatcccaacacagggaaggttcataccctgctgactgtggaagtgttcgga
gtcattcgctccctcatggcctttaggctgacgggtgggaccaaagactatatcgttgtg
ggcagtgattcgggacgcattgttattctggagtaccagccctcaaagaacgtgtttgag
aagattcatcaggaaacctttggcaagagtggatgtcgcagaatcgttccaggccagtac
ttggctgtagacccaaagggtttctgccagttaattggtgcgattgaaaagcagaagctg
gtgtatatcttgaacagagatgctgctgctcgtctcaccatttcctccccactggaagcc
cacaaggccaataccttggtctaccatgtggtgggagtcgatgtgggatttgaaaacccc
atgtttgcttgtctggaaatggattatgaggaagcagacaatgatcccacaggagaagca
gcagccaacacgcaacagacattgacgttttatgaactggacttgggtttgaaccacgtt
gttagaaaatacagcgagcccttggaagagcacggcaacttccttataacagttcctggt
ggttctgatggacctagtggggtgctgatctgttcagaaaactatattacttataaaaat
tttggtgaccagcctgatatcagatgcccaattcccaggagacggaatgacttggatgac
ccagagagaggtatgatttttgtctgctctgccacacataagaccaagtccatgttcttc
ttcctggcccagacagagcagggtgacatcttcaaaattactctggagacggatgaagac
atggtaacagagattcgactcaagtactttgacactgttcctgttgccgctgccatgtgt
gtgctgaagacagggtttctctttgtggcatctgaatttggaaaccattacctgtaccag
atagctcacctgggtgatgatgatgaggagccagagttctcttctgccatgcctcttgag
gaaggagatacgttcttttttcagccacgacctctcaagaacctggtgctggtggatgaa
ttggacagtttatctcctattctgtgttgtcagatagcggatctggccaatgaagacaca
ccccagttgtatgtggcttgtggtcgggggccccggtcatctctgagggttctaagacat
ggacttgaggtatccgaaatggccgtctcggagctgcctggtaaccccaatgctgtatgg
accgtgaggagacatgttgaagatgaattcgatgcctatatcattgtgtccttcgtaaat
gccacactggtgctatctatcggagagactgtagaagaagtgactgactctggattcctg
ggtactacacccaccttgtcctgctctcttcttggtgatgatgctttggtacaggtttat
ccagatgggatccggcacatccgagcagataagagggtaaatgaatggaagacaccaggg
aagaaaaccattgtaaaatgtgctgtgaaccagagacaagtagtgatagcactgactgga
ggagaactggtttactttgagatggacccgtcaggacagctgaatgagtacacagagaga
aaggagatgtcggccgatgtagtttgtatgagcctggccaatgttccccctggggagcag
cgctcccggttccttgctgttgggctggtggacaacactgtcagaattatttcccttgat
ccttcggattgcttgcagccgctgagtatgcaggcccttcctgcgcagcccgagtcgctg
tgcattgtggagatgggtggcacagagaagcaggatgagctgggggagaggggctccatt
ggctttctgtacctgaacattggactgcagaatggtgtgctgctgcgaactgtcctggat
cctgttactggcgatctttctgataccaggaccagataccttggctcacggcctgtgaaa
ctcttccgagtccgaatgcaaggccaagaggcggtgctggccatgtcaagccgctcctgg
ctcagttattcctatcagtcacgcttccacctgactcccctgtcgtatgagacactggag
tttgcatctggttttgcgtctgagcagtgccccgagggcattgtagccatctccacaaac
acattgaggattttggcactggagaagctgggggcagtcttcaaccaggttgccttcccg
ttgcagtacacaccccgaaaatttgtcattcacccagagagcaacaacctgatcatcatc
gagacagaccacaacgcttacactgaggccaccaaggcacagaggaagcagcaaatggcc
gaggaaatggtggaggctgcgggtgaagatgagcgggagttggctgcagagatggctgca
gcctttctgaacgagaaccttcccgagtccatctttggtgctcccaaggcagggaatgga
cagtgggcctctgttatcagggtgatgaaccccatccagggaaataccttagatctggtc
cagctagagcagaatgaagctgccttcagcgtggctgtttgccggttctccaatactggt
gatgagtggtacgtgctagtgggagttgccaaggacctgattctgaacccacgctcggtt
gctgggggatttgtctatacatacaagctggtgaatagtggtgagaagctggagtttctg
cacaagacccctgtggaggaggttcctgcggccattgctccattccaaggtagagtctta
attggagttggaaagctcttgcgcgtttatgacctgggcaagaagaaactgcttcggaag
tgtgagaataagcatatcgccaactacatttgcgggatccaaaccattgggcacagagta
attgtttcagacgttcaggaaagtttcatctgggtgcgctacaaaaggaacgagaaccag
ctcatcatctttgctgatgacacttatccccggtgggtcaccacagcaactctcctggat
tacgacaccgtggctggagcagacaagtttggcaacatctgcgtggtgagattgcctccc
aacaccaatgatgaggtggatgaggatcccacaggcaacaaagctctctgggacaggggg
ctgcttaatggagcatcgcagaaggctgaagtgattatgaattaccacgtgggagagacg
gtgctttcnnnnnnnnnnnnnnnnnnnctacagaagaccacgctgatcccaggaggctct
gaatctcttgtctataccaccttatcgggggggataggaatcttggtcccttttacttcc
cacgaggatcacgacttcttccagcatgtggaaatgcacttaaggtctgagcaccctcct
ctctgtggccgagaccatctcagcttccgctcctactacttcccagtgaagaatgtgatt
gatggggacctatgtgagcagttcaactccatggagccgaacaaacagaaaaatgtggcc
gaagagctggaccggaccccacccgaggtgtccaaaaagctggaagacatccgcacgcgc
tacgctttctga
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integrated database retrieval system
