Egretta garzetta (little egret): 104130244
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Entry
104130244 CDS
T05152
Symbol
CNOT1
Name
(RefSeq) LOW QUALITY PROTEIN: CCR4-NOT transcription complex subunit 1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
egz
Egretta garzetta (little egret)
Pathway
egz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
egz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104130244 (CNOT1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
egz03019
]
104130244 (CNOT1)
Messenger RNA biogenesis [BR:
egz03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
104130244 (CNOT1)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
104130244 (CNOT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
CNOT1_TTP_bind
DUF3819
CNOT1_HEAT
Motif
Other DBs
NCBI-GeneID:
104130244
NCBI-ProteinID:
XP_009641565
LinkDB
All DBs
Position
Unknown
AA seq
2371 aa
AA seq
DB search
MNLDSLSLALSQISYLVDNLTKKNYRASQQEIQHIVNRHGPEADRHLLRCLFSHVDFSGD
GKSSGKDFHQTQFLIQECASLITKPNFISTLSYAIDNPLHYQKSLKPSPHLFAQLSKVIK
LSKVQEVIFGLALLNSFSSDLRGFAAQFIKQKLPDLLRSYIDADVSGNQEGGFQDIAIEV
LHLLLSHLLFGQKGAFGVGQEQIDAFLKTLRRDFPQERCPVVLAPLLYPEKRDILMDRIL
PDSGGIAKTMMESSLADFMQEVGYGFCTSVEECRNIIMQFGVREVTAAQVARVLGMMART
HSGLTDGIPLQSISAPGSGIWSDGKDKSDGAQAHTWNVEVLIDVLKELNPSLDFKVVTYE
LDHPGFQIRDSKGLHIVVFGIQRGLGMEVFPVNAIYRPWKHAEGQLSFIQHSLINPDIFC
FADYPCHTVATDILKAPPEDDNREIATWKSLDLIESLLRLAEVGQYEQVKQLFSFPIKHC
PDMLVLALLQINTSWHTLRHELISTLMPIFLGNHPNSAIILHYAWHGQGQSPSIRQLIMH
AMAEWYMRGEQYDQAKLSRILDVAQDLKALSMLLNGTPFAFVIDLAALASRREYLKLDKW
LTDKIREHGEPFIQACMTFLKRRCPSILGGLAPEKDQPKSAQLPPETLATMLACLQACAG
SVSQELSETILTMVANCSNVMNKARQPPPGVMPKGRPPSASSLDAISPVQIDSLAGMASL
SLGGSAAPHTQSMQGFPPNLGSAFSTPQSPAKAFPPLSTQNQTTGFSGIGGLSSQLPVGG
LTTGSLTGIGTGALGLPAVNNDPFVQRKLSTSGLNQPTFQQSKMKPSDLSQVWPEANQHF
SKEIDDEANSYFQRIYNHPPHPTMSVDEVLEMLQRFKDSNIKREREVFNCMLRNLFEEYR
FFPQYPDKELHITACLFGGIIEKGLVTYMALGLALRYVLEALRKPFASKMYYFGIAALDR
FKNRLKDYPQYCQHLASISHFIQFPHHLQEYIEYGQQSRDPPVKMQGSITTPGSIALAQA
QAQAQVPAKAPLAGQVSTIVTTSTTTTVAKTITITRPTGVSFKKDVPPSINTTNIDTLLV
ATDQTERIVEPPENVQEKIAFIFNNLSQSNMTQKVEELKETVKEEFMPWVSQYLVMKRVS
IEPNFHSLYSNFLDTLKNPEFNKMVLNETYRNIKVLLTSDKAAANFSDRSLLKNLGHWLG
MITLAKNKPILHTDLDVKSLLLEAYXLLYVVPFVAKVLESSVRSVVFRPPNPWTMAIMNV
LAELHQEHDLKLNLKFEIEVLCKNLALDINELKPGSLLKDKDRLKNLDEQLSAPKKDVKQ
PEELPPITTTTASTTPATSTTCTATVPPQPQYSYHDINVYSLGGLAPHITLNPTIPLFQA
HPQLKQCVRQAIERAVQELVHPVVDRSIKIAMTTCEQIVRKDFALDSEESRMRVAAHHMM
RNLTAGMAMITCREPLLMSIATNLKNSFATALRAASPQQRDMMEQAAAQLAQDNCELACC
FIQKTAVEKAGPEMDKRLATEFELRKHARQEGRRYCDPVVLTYQAERMPEQIRLKVGGVD
PKQLAVYEEFARNVPGFLPTNDLTQPTGFLAQPMKQAWATDDVAQIYDKCMTELEQHLQS
IPHTLAMNPQAQALRSLLEAVVVARNSRDAIAALGLLQKAVEGLLDATSGADADLLLRYR
ECHLLVLKALQDGRAYGSPWCNKQITRCLIECRDEYKYNVEAVELLIRNHLVNMQQYDLH
LAQSMENGLNYMAVAFAMQLVKILLVDERSVAHVTEADLFHTIETLMRINAHSRGNAPEG
LPQLMEVVRSNYEAMIDRAHGGPNFMMHSGISQASEYDDPPGLREKAEYLLREWVNLYHS
AAAGRDSTKAFSAFVGQMHQQGILKTDDLITRFFRLCTEMCVEISYRAQAEQQHNPAANP
TMIRAKCYHNLDAFVRLIALLVKHSGEATNTVTKINLLNKVLGIVVGVLLQDHDVRQSEF
QQLPYHRIFIMLLLELNAPEHVLETINFQTLTAFCNTFHILRPTKAPGFVYAWLELISHR
IFIARMLAHTPQQKGWPMYAQLLIDLFKYLAPFLRNVELTKPMQILYKGTLRVLLVLLHD
FPEFLCDYHYGFCDVIPPNCIQLRNLILSAFPRNMRLPDPFTPNLKVDMLSEINIAPRIL
TNFTGVMPPQFKKDLDSYLKTRSPVTFLSDLRSNLQVSNEPGNRYNIQLINALVLYVGTQ
AIAHIHNKGSTPSMSTITHSAHMDIFQNLAVDLDTEGRYLFLNAIANQLRYPNSHTHYFS
CTMLYLFAEANTEAIQEQITRVLLERLIVNRPHPWGLLITFIELIKNPAFKFWNHEFVHC
APEIEKLFQSVAQCCMGQKQAQQVMEGTGAS
NT seq
7116 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttgactcgctctcgctggccttgtctcaaatcagctacctggtggacaattta
actaagaaaaactaccgagccagccagcaggaaatacagcatattgtgaataggcacggt
cccgaggcagacaggcatttactacgctgtctattctcgcacgtggatttcagtggcgat
ggtaaaagcagtggcaaagatttccatcagactcaatttctgatccaggagtgtgcgtcg
ctgattacaaaaccaaactttatctcgacgctgtcctacgccattgacaatccgttgcac
tatcagaagagtctaaagccttcaccccatttatttgcccaattgagtaaagtcatcaaa
ttaagtaaagttcaagaggtgatttttggtctcgctttactgaactctttcagctcggat
ctacgaggttttgctgcccagtttatcaaacagaaactcccggatctcttgcgctcctac
attgacgcggacgtcagtggaaatcaagaaggtggcttccaagatattgcaatagaggtc
ctgcaccttctcctctcccatctcctttttgggcagaagggagcctttggggtaggacag
gaacagattgacgctttcctcaaaacattacgtagagattttccccaagagcgttgccct
gtggtgcttgcaccacttctataccctgaaaaacgggacattctaatggacaggatcctg
cctgattctggagggatagccaaaaccatgatggagagttctctggcagatttcatgcaa
gaagttggctatggcttttgtacaagtgtcgaagaatgtcgcaacataatcatgcagttt
ggtgttcgggaagtcacggctgcccaggttgccagggttttggggatgatggcccgaact
cattcagggttgacggatggtattccattacaatctatttcggctcctggcagtgggatt
tggagtgatgggaaagataaaagtgatggagcacaagcacatacctggaatgtggaggtc
ttaattgatgttcttaaagagctgaatcctagcctggacttcaaagtagtaacctatgaa
ttggatcatccgggatttcagattcgtgatagcaagggcctgcatattgtagtgtttggc
atccagagagggctgggcatggaagtttttccagttaatgccatatacagaccttggaag
catgcagagggccagctctccttcattcaacattccctcataaaccctgacatcttctgt
tttgctgactacccttgtcacactgttgccacagacatcctgaaagcgccaccagaggat
gacaatcgagaaattgctacatggaagagcctggatttgattgaatctctgttacgactg
gcagaagtgggacagtatgaacaggttaagcagctcttcagttttcctatcaagcattgc
ccagatatgttggtattggccttattgcagatcaacacgtcctggcataccttgcgccat
gaactcatctccacgctcatgccaattttccttggtaaccatcccaactctgctatcatt
ttgcactatgcatggcatggacagggtcagtctccttcgattcgtcagcttatcatgcat
gcaatggcagaatggtacatgagaggggagcagtatgaccaggccaaattgtcacgtatt
cttgatgtggcgcaagatttgaaggccttgtcaatgctgctaaatggtactccatttgcc
tttgttattgaccttgctgcacttgcctctcgacgggaatacctcaaacttgacaaatgg
ctcacagataaaattcgggagcatggggagcccttcatccaggcctgtatgactttctta
aagagaagatgcccatctatcctgggtggccttgcaccagaaaaagatcagcccaaaagt
gctcagcttcctccagaaaccttggcgacgatgctggcatgtctgcaagcttgtgctggg
agtgtttctcaggagctgtcagagacgatcctcaccatggtagctaactgcagtaatgtc
atgaacaaggccaggcagcctccacctggagtcatgccaaaaggacgcccgcccagtgct
agcagcttggatgccatctctcctgtacagattgactcgcttgcaggaatggcatctctc
agtttaggtggctcagctgctcctcatacccagagcatgcaaggcttccctccaaacttg
ggctctgcgttcagtactcctcagtcaccagcaaaagcgttcccccctctttctacccaa
aaccagacaacgggtttcagtggcatcggaggactctcttcacagcttccagtaggtggt
cttactacgggtagcctgactggcataggaaccggagccctgggccttcctgcggtgaac
aatgacccattcgtgcaaaggaagctgagcacatctggactgaaccagcctacattccag
cagagtaagatgaaaccttctgacttatctcaggtgtggccagaggctaatcagcacttt
agcaaagaaatagatgatgaggcaaacagctacttccagcgcatttacaaccatccacca
catccgaccatgtctgtagatgaggtcttggaaatgctgcagaggtttaaggactccaac
attaaacgggaacgagaagtgtttaactgtatgctgaggaacttgtttgaggaataccgt
ttctttccccagtacccagataaagagctgcacataacagcctgcctctttggtgggata
atagagaaaggactggttacttatatggcattgggcctggccctgcgctatgttcttgaa
gccttacgaaagccttttgcatccaaaatgtactattttggtattgctgcactagataga
tttaaaaatagattgaaggactatccccagtattgtcagcacttggcttctattagtcac
tttatacagttcccacatcatttacaggagtacatagaatatggacagcaatccagagat
cctcctgtgaagatgcagggttcaatcaccacccctggaagtattgcacttgcccaggct
caggcccaggcccaagttccagcaaaagctcctcttgctggccaagtcagcactatagta
accacctcaaccaccaccactgttgcaaaaaccattacaatcacccgaccgactggagtc
agcttcaagaaagatgtgccgccttccattaatactaccaacattgacacgttgttagta
gcaacagatcaaactgaaagaattgtggaacctccagagaatgtccaggaaaaaattgct
ttcatcttcaataatctgtctcagtcaaatatgacgcagaaggttgaagaactgaaggaa
acagtgaaagaagagttcatgccttgggtgtcacagtatcttgtgatgaagagagtcagt
attgagcctaattttcacagcttatattcaaacttccttgacacacttaagaatccagag
ttcaataaaatggttctgaatgaaacatacagaaatattaaggtgctactgacatcagat
aaagctgcagccaacttctcagatcgttccttgttaaagaaccttggtcactggctggga
atgattacgctggctaaaaataagcccatcttgcacacggatttggatgtgaaatcgcta
ctgctggaagcatatnaattgctttatgtagtgccgtttgttgccaaagtcttagaatcc
agtgtcaggagtgtggtcttcaggcctccaaacccgtggacaatggccattatgaatgtt
ttagctgagctacatcaagaacatgatctaaaattgaatctgaagtttgagattgaggtg
ctctgcaagaatcttgcactagacatcaatgagctgaaacctggaagtctcctgaaagac
aaggatcgtctgaaaaatctggatgagcagctgtctgctccaaagaaggatgttaagcag
ccagaagagctaccacccatcacaacaactactgcttctacaactccagctaccagcacc
acttgtacagccacggttcctccacagccccagtacagttatcatgacatcaacgtctat
tctttaggagggttggctccacatattaccttaaatccaacgattccgctgttccaggcc
cacccacagttgaagcagtgtgtgcggcaggcgatagagcgagcagtgcaagagcttgtc
catccggtggttgatcggtccattaagattgccatgactacttgtgagcagatagtcagg
aaggactttgcgctggattcagaggagtcacgaatgcgtgtggccgcacaccatatgatg
cggaacctgactgctgggatggccatgatcacctgcagggaacccttgctgatgagcata
gctaccaacttgaaaaatagttttgctactgccctgagggcagcctccccacaacagagg
gacatgatggagcaggcagctgcccagttagcgcaggataactgcgaactagcatgctgc
tttatccagaagacagctgtggaaaaggcaggccccgagatggacaagaggctcgcaact
gaatttgagctcagaaaacatgctagacaagagggtcgtcggtattgtgatccggttgtg
ttaacttaccaggctgagcggatgccagaacagatcaggttaaaggttggaggtgtggac
ccaaaacagctggctgtttatgaagagtttgcacgcaatgtccctggcttcttgcctacc
aatgacttaactcagcctacaggattcttggctcagcctatgaagcaagcttgggctaca
gatgacgtagcacaaatctatgacaaatgtatgacagaactggagcagcacctgcagtcc
attccacacactctggccatgaatcctcaagcccaagcattgcgcagcctcttggaggcg
gtggtggtggctcgtaactcccgtgatgctattgctgcacttggacttctgcagaaggct
gtagaaggcttactggatgccaccagtggggcagatgctgacctcctgcttcgctatcgt
gagtgtcatctgcttgtgctgaaggctctgcaggacggtcgtgcatatggatctccgtgg
tgtaataaacaaattactaggtgcctgattgaatgcagagatgagtacaagtataatgtg
gaagccgtggagctgctaatccgcaatcaccttgtcaacatgcagcagtatgaccttcac
ttggcgcagtcaatggagaatggcttgaactacatggctgtggcatttgccatgcagttg
gtaaagatcctgttggtggatgaaagaagcgtcgcccacgtaacggaggcagatctgttt
cacacaattgagacactcatgaggattaatgctcattctagaggaaacgccccggaagga
ttaccccagctgatggaagtggtccgatcaaactatgaagcgatgattgaccgtgctcac
ggaggtcccaatttcatgatgcattcaggaatttcccaagcctctgagtatgatgatcca
ccaggtctgagggagaaggcagaatacctgctgagggaatgggtgaacctctaccattca
gctgcagcgggccgtgacagtaccaaagcattctctgcgtttgttggacagatgcaccag
caaggaatcctgaaaacagatgacctgattacccgctttttccgtctttgcaccgaaatg
tgtgttgaaatcagctatcgtgctcaggctgagcaacagcataatccagctgccaacccc
actatgattcgagccaagtgctaccacaatctggatgcctttgtgcgacttattgcgctg
ctggtcaagcactctggggaggcaaccaacacagttacaaagatcaacctcctgaataag
gttcttggtattgtggtgggagttcttctgcaagaccatgatgttcggcagagtgaattt
cagcaacttccttaccatcgcattttcatcatgttgctgttggaattaaatgctcctgag
catgtgctggagaccatcaacttccaaacactcacagctttctgtaacacatttcacatc
ctgaggcctacaaaagctccaggttttgtttatgcctggctggaactgatctcccatcgg
atatttattgcaagaatgctggcacatacaccacagcagaagggttggcctatgtatgcc
cagttactgatcgatcttttcaagtacttggctcctttccttagaaatgtggaactcacc
aaacctatgcaaattctttacaagggcactctgcgtgtgctgctggtcttgttgcatgat
ttcccagaatttctttgtgactaccactatgggttctgtgatgtgatcccacctaactgt
attcagctaaggaacctgatcctgagtgccttcccacggaacatgaggcttccagaccct
ttcacccccaacctaaaggtggatatgttaagtgagattaatatcgctccacgaatactc
acgaatttcactggagtgatgccacctcagttcaagaaagacttggattcctatctcaaa
acccgttctccggtcacttttttgtctgacttgcgcagcaacctacaagtatcaaatgaa
cctggcaaccgctacaacatccagctgattaatgcactggtgctctacgtaggtactcaa
gctattgcgcacattcacaacaaaggcagcacaccctctatgagcaccattacccactca
gctcacatggacatattccagaatttggcagtagacctggacactgaaggccggtacctt
ttcttgaacgcaattgccaatcagctgcgataccccaacagtcacacccactactttagt
tgcaccatgctgtacctgtttgcagaggccaacacggaggctatccaggagcagatcact
agggttctcttggaacgactgattgtaaataggcctcatccttggggtctccttattact
ttcattgagctgataaaaaacccagcatttaaattctggaaccatgagttcgttcactgc
gctccagaaattgagaagttgttccagtcagttgcacagtgctgcatggggcagaagcag
gcccagcaagtaatggaagggactggtgccagttag
DBGET
integrated database retrieval system
