Egretta garzetta (little egret): 104130265
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Entry
104130265 CDS
T05152
Symbol
KATNB1
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1 isoform X3
KO
K18643
katanin p80 WD40 repeat-containing subunit B1
Organism
egz
Egretta garzetta (little egret)
Brite
KEGG Orthology (KO) [BR:
egz00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
egz04812
]
104130265 (KATNB1)
Cytoskeleton proteins [BR:
egz04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
104130265 (KATNB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Katanin_con80
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_DCAF4
Beta-prop_SCAP
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_SPT8
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
WD40_RFWD3
Beta-prop_EIPR1
Beta-prop_Vps41
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
Beta-prop_HPS5
Beta-prop_RIG_1st
eIF2A
RMC1_N
PROPPIN
WDR54
VPS8_N
Beta-prop_WDR19_1st
Beta-prop_DCAF12
Beta-prop_VPS8
Beta-prop_LRRK2
Beta-prop_IP5PC_F
WD_LRWD1
Motif
Other DBs
NCBI-GeneID:
104130265
NCBI-ProteinID:
XP_009641586
LinkDB
All DBs
Position
Unknown
AA seq
658 aa
AA seq
DB search
MAGALTTKTAWKLQEITAHSSNVSSLVLGKSSGRLLATGGDDCRVNIWSVNKPNCIMSLT
GHTTPIESLQINMNEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPFGSFV
ASGSLDTNIKLWDVRRKGCVFRYKGHTEAVRRLRFSPDGKWLASAADDHTVKLWDLAAGK
IMFEFTGHTGPVNIVEFHPNEYLLASGSSDRTVRFWDLEKFQVVSCIEEEATPVRCVLFN
PDGCCLYSGFQDSLRVYGWEPERCFDVVLVNWGKVADLSICNNQLIGVSFAQSTVSSFVV
DLSRVTKSGSIGHGLIRDDEPLVPPTPMGSSLRRIYDRPSTSCSKPQSRVKHNSESERRS
PSSEDDRDEKESKAEIQNPEDYKEIFQPKNAICRTSPRNNEPFPAPPEDEPVTAKEAVKS
SQAADVQTPLPKQELPDPVQRPPIASSTPLTRTEPSVIPAARNEPIGLKASDFLPAVKNQ
NQTELVDEEAMSQIRKGHETMCVVLTSRHKNLDTVRAVWSTSDIKNSVDSAVAINDLSVV
VDLLNIVNQKASLWKLDLCTIVLPQIEKLLQSKYESYVQTGCASLKLILQRFLPLITDIL
AAPPSVGVDITREERLHKCKLCYKQLKNISNIVKNKSGLSGRHGSAFRELHLLMAVLE
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atggccggggccctcaccactaagacggcgtggaagctgcaagagatcacggctcacagc
agcaatgtatcctcactagtcctggggaaaagttcaggccgactgctggcaactggagga
gatgactgtcgggtcaacatatggtcagttaacaaacccaactgcatcatgagcttgaca
ggccacacaacgcccatcgagagcctacagatcaatatgaatgaggaactcattgttgca
gggtcccagtcagggtccattcgagtctgggacctggaagctgccaaaattcttcgtacc
ttacttggtcacaaagcgaatatctgcagcctcgatttccacccttttggaagctttgtg
gcgtctggctctctggacacaaacattaagctctgggatgtaagaagaaaaggctgtgtc
ttcaggtacaagggtcacacagaagcagttcgacgtctccgctttagtcctgatgggaaa
tggttagcctctgcagctgatgatcacactgtcaagctgtgggatctggctgctgggaag
ataatgtttgagtttacaggacataccggcccagtaaacattgttgaattccatcccaat
gaatacctcttggcttctggcagctctgacaggactgtccggttctgggacttggagaag
ttccaggttgtgagctgtattgaagaggaggctactcctgtcaggtgtgtgctcttcaac
ccagatggctgctgcttgtacagcggcttccaggattcgctgcgtgtgtatggctgggag
ccagagcgctgttttgatgtggtcttggtgaactggggaaaagtagctgacttgtctatc
tgcaacaaccagctgataggagtttcctttgcgcaaagcacagtctcgtcctttgttgtg
gatctcagcagagtcacaaagtcaggctccattggtcatgggctgatcagggacgatgag
cctcttgtgccacctacccccatggggtcctcccttcgccgcatctatgacaggccctca
actagctgcagcaagccacaaagtagagtgaagcacaactctgagagtgagaggcgcagt
cccagcagtgaagatgaccgggatgagaaggaatcgaaggccgagatccagaacccggag
gattacaaagagatcttccagcccaagaatgcaatctgtcgaacttctcctcgaaacaac
gagccctttccagcccctcctgaggatgagcccgtaactgcaaaggaagcagtgaagtcc
agccaagctgcagacgtccagaccccgttgccaaagcaagaactgcctgatccggttcag
aggccgcccattgcctcctcaactcctttgaccagaacagagccgtcagtgattcctgca
gccaggaatgagcccattggcctgaaggcctctgactttctgccagctgtgaaaaaccaa
aaccagacagagcttgtggatgaggaagccatgtcccagatcaggaaaggccacgagacc
atgtgtgtggtactcaccagccgccacaagaacctggacactgtgcgggctgtatggagc
accagcgacatcaagaactcggtggactccgcagtggcgatcaatgatctgtctgttgtt
gtggacctcttgaatattgtcaaccaaaaagcgtctctctggaagctggatttgtgtact
atagtcctgccacagatagagaaactactccaaagtaaatatgaaagttacgtgcagact
ggctgtgcctccctgaagctcattctccagagattcttgccactgatcacagacatcctt
gctgctccaccttctgttggagtggacatcaccagagaggaaaggctccataaatgcaag
ctgtgctacaagcagctgaaaaacatcagcaacatcgtcaagaacaagtctgggctcagt
ggccgccatggtagtgcctttcgggaactgcatctcctcatggccgtcctggagtga
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