Egretta garzetta (little egret): 104130624
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Entry
104130624 CDS
T05152
Symbol
CASC3
Name
(RefSeq) protein CASC3
KO
K14323
protein CASC3
Organism
egz
Egretta garzetta (little egret)
Pathway
egz03013
Nucleocytoplasmic transport
egz03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
egz00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104130624 (CASC3)
03015 mRNA surveillance pathway
104130624 (CASC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
egz03019
]
104130624 (CASC3)
Messenger RNA biogenesis [BR:
egz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
104130624 (CASC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
104130624
NCBI-ProteinID:
XP_035755142
LinkDB
All DBs
Position
Unknown
AA seq
657 aa
AA seq
DB search
RTFFSFSPQESEDGIEGDAVLSDYESAEDSEAEEEDYSEEESAKVELKQDSNDSCESAAK
AEKGDEKPDSKGAVTGERQSGDGQESTEPVENKVGKKVPKHLDDDEERKNPAYIPCKGLF
FEHDLRGQTQEEEVRPKGRQRKLWKDEGRWEHDKFREDEQAPKTRQELIALYGYDIRSAH
NPDDIKPRRMRKPRFGSPPQRDPNWSNERPNKPPRHQGADGTSAPPRTFTNRSSAGTGRM
PPPRNYPRMGGYKETRPSYRASEASVQHPSRNGEQAKQESNYRAKRAEQTPPRDKSPEME
AAHVHSSPVKEEAALENQATAADAAQPPPDRPIEKKSYSRARRTRIKAGDAGKLADEVPA
SEGLTPVPPKPVQAETSPPPAKSSNWESPVESSLDGLEQEMTQMNLSEQNWTPGQSQFIQ
PRELRGIPNHMHVGTGPPPQFNRMEEMAVQGGRVKRYSSQRQRPPVPEPAPPMHISIMEG
HYYDPLQFQGPIYTHSENPAPLPPQGMIVQPEMHLPHPGEEPAPQQGTGQLVLTLWLCPR
GLSLCWGPDNSGFAQPLLLGESVFAISTTWKRPASLMHLNPGYPYPPGALSPPPPPHLYS
NTQAQSQVYGGVTYYNTVQQQVQPKPSPPRRTSQPVTIKPPPPEDSKGEKSKERSNT
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
cgcacctttttctccttctctccacaggaaagcgaggatggcattgaaggagatgctgta
ctctcagattacgaaagcgcagaagactcggaggcagaggaagaggattacagcgaggaa
gaaagtgccaaggtggaactgaagcaggatagtaatgattcctgtgagtcagcggcaaaa
gcagagaaaggggatgagaaacctgactccaaaggtgctgtaaccggtgagaggcaaagt
ggggacgggcaggagagcactgaacctgttgagaataaagttgggaaaaaagttcccaag
cacctggacgatgatgaggagcggaagaacccggcttacatcccgtgcaaagggctcttc
tttgagcacgacctccgagggcagacacaggaggaggaggtcaggccgaagggtcgtcag
cggaagctgtggaaggatgagggccgctgggagcacgacaaattccgggaggacgagcag
gcccccaagaccaggcaggagctgattgcgctttatggctatgacatcaggtcagctcac
aaccccgatgacatcaagccaaggaggatgcgcaaaccaagatttgggagtcctcctcag
cgagacccaaactggtccaatgagaggccaaataagcccccaaggcaccaaggcgcagac
ggcacttcagctcccccgcgaaccttcaccaacaggagctccgcaggtacagggaggatg
cccccacctaggaactacccgaggatggggggctacaaagagacccgtccaagctaccga
gcttcggaagcaagtgtccagcatccgtctcgtaacggtgagcaagcgaaacaggagagc
aactatcgagcaaagcgtgcagagcaaaccccaccgagagacaaatcacccgagatggaa
gcggcacatgtccacagcagccctgtgaaggaggaggctgctttggaaaaccaagccaca
gctgctgatgctgcacagccaccgccagacagaccaattgaaaagaagtcttattcccgg
gcaagaaggaccagaatcaaagctggggatgcagggaagctggcagatgaagtgcccgct
tcggaagggctgactcctgtgcctccaaaacctgtgcaagctgagacgtcccccccacca
gccaagagcagtaactgggagtcgccagtagaatccagcttggatggacttgagcaagag
atgacccaaatgaatctcagtgagcagaactggactccggggcagtctcagttcatacag
ccccgggagctgaggggtattcctaaccatatgcacgtgggaactgggccaccacctcag
tttaacaggatggaggaaatggcggtgcaggggggccgtgtgaaacgctactcgtcgcag
cggcagagaccgccggtgccggagcctgccccccccatgcacatcagcatcatggaaggg
cactactacgacccactacaattccagggaccaatctacacccacagtgagaacccggcc
ccgctgccgccccaagggatgatcgtacagccagaaatgcacctccctcatccaggtgag
gaaccagctccccagcagggcacggggcagctggtattgacgttgtggttgtgccctagg
gggctcagcctgtgctggggaccggataactctggttttgcacagcctctgttgctgggg
gaatccgtttttgctatttctacaacatggaagagacctgcttccctcatgcacttaaat
cctggctacccctaccccccaggagcactgtcccctccgccccctcctcatctctattcc
aacacgcaggcccagtcccaggtgtacggcggggtgacgtactacaacactgtccagcag
caagtccagcccaagccttctccacctcgaaggacgtcccagcctgtgactatcaagcca
ccccctcctgaggacagcaaaggtgaaaagtcaaaggagaggagcaacacgtag
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