Egretta garzetta (little egret): 104130888
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Entry
104130888 CDS
T05152
Symbol
PTBP1
Name
(RefSeq) polypyrimidine tract-binding protein 1
KO
K13218
polypyrimidine tract-binding protein 1
Organism
egz
Egretta garzetta (little egret)
Brite
KEGG Orthology (KO) [BR:
egz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
egz03019
]
104130888 (PTBP1)
03041 Spliceosome [BR:
egz03041
]
104130888 (PTBP1)
Messenger RNA biogenesis [BR:
egz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
104130888 (PTBP1)
Spliceosome [BR:
egz03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
104130888 (PTBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_PARP14_3
RRM_Nup35
CBP_BcsO
Motif
Other DBs
NCBI-GeneID:
104130888
NCBI-ProteinID:
XP_035755500
LinkDB
All DBs
Position
Unknown
AA seq
558 aa
AA seq
DB search
MALGIVQDITVGTKRGSDELFSTCVTNGPFIMSSNSSSAANGNDSKKFKGDSRSAGVPSR
VIHVRKLPSDVTEAEVISLGLPFGKVTNLLMLKGKNQAFIEMNTEEAANTMVNYYTTVTP
VLRSQPIYIQFSNHKELKTDNSPNQARAQAALQAVNSVQSGNLALSASAAAVDAGMAIAG
QSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKL
SLDGQNIYNACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDNQPSLDQTMAAAFGA
PGIISASPYAGAGFPPTFAIPQAAGLTVPNVHGALAPLAIPSAAAAAAAAGRIAIPGLAG
AGNSVLLVSNLNPERVTPQCLFILFGVYGDVQRVKILFNKKENALVQMADGNQAQLAMSH
LNGQKLHGKPIRITLSKHQTVQLPREGQEDQGLTKDYGNSPLHRFKKPGSKNFQNIFPPS
ATLHLSNIPPSITEEDLKMLFSSNGGMVKGFKFFQKDRKMALIQMGSVEEAIQSLIDLHN
HDLGENHHLRVSFSKSTI
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggctctgggcattgtccaagatataacagttggtacaaagcggggatctgacgagctt
ttctctacttgtgttactaacggaccctttatcatgagcagcaactcttcttctgcagct
aatggaaacgacagcaaaaaattcaaaggcgatagtagaagtgctggggtcccatcccga
gtgatccacgtccgtaaactccccagcgacgtcacggaggcagaggtcatttctttgggc
ttacctttcggcaaggtcaccaatcttctaatgttgaaaggcaaaaatcaggctttcata
gaaatgaatacagaggaggcagccaacaccatggtcaactactacaccacagtcactcca
gttctccgaagccagcccatctatatccagttctccaaccacaaggagctcaagacggac
aactctccaaaccaagcacgtgcccaagcagctctgcaagcggtgaactccgttcagtct
ggaaacctagcgctgtcagcctctgctgcagcagtggatgcaggaatggcgatagctggc
cagagccctgtcctgaggatcattgttgagaatctcttctaccctgtcactctagatgtt
ctgcatcagattttttccaaatttggtacagtcttgaagataattacgttcacaaagaac
aaccagtttcaggcgctgttacaatatgctgacccagtgagcgctcagcatgccaaactg
tctttagatggacagaatatctacaatgcctgttgcacactgcgcatagatttctcaaag
ctcacaagtctcaatgtaaaatacaataatgataagagcagagattatacgcgaccagac
ctaccttccggggataaccagccctccctcgatcagaccatggcagctgcttttggtgcc
ccaggaataatttccgcttctccatatgcgggagctggctttcctcctacctttgcaatt
cctcaggctgcaggcctgacagttccaaatgttcatggagcactagctcctttggctatc
ccatcagcagcagctgcagcggctgcagcaggacggattgccattcccggcctcgctggg
gcagggaactctgttctgctggttagcaatctgaatcctgagagagttacaccccaatgc
ctctttattcttttcggagtctatggtgatgtgcagagggtgaagattttatttaataag
aaagagaatgccctagtgcagatggctgatggaaaccaggcccagcttgccatgagccat
ttgaatggtcagaagcttcacgggaagccaatccgtatcacgctgtccaagcaccagact
gtacagctccctcgcgagggacaggaagaccaaggtctgaccaaggactatgggaattct
cctctacatcgtttcaagaaaccaggctccaaaaatttccagaacatctttcccccttct
gccactcttcatctgtccaatattccaccttcaataactgaagaagaccttaagatgttg
ttttcaagcaatggtgggatggtcaaaggattcaaattcttccagaaggaccgcaaaatg
gctctgatccagatgggctctgtggaagaagccattcaatcgctcattgacctccataac
catgacctgggtgagaaccatcacctgcgtgtgtccttctccaagtccaccatttaa
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