Egretta garzetta (little egret): 104131167
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Entry
104131167 CDS
T05152
Symbol
SCAF8
Name
(RefSeq) LOW QUALITY PROTEIN: SR-related and CTD-associated factor 8
KO
K13191
RNA-binding protein 16
Organism
egz
Egretta garzetta (little egret)
Brite
KEGG Orthology (KO) [BR:
egz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
egz03021
]
104131167 (SCAF8)
03041 Spliceosome [BR:
egz03041
]
104131167 (SCAF8)
Transcription machinery [BR:
egz03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
104131167 (SCAF8)
Spliceosome [BR:
egz03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
104131167 (SCAF8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CID
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
104131167
NCBI-ProteinID:
XP_009642586
LinkDB
All DBs
Position
Unknown
AA seq
1336 aa
AA seq
DB search
MEVDISCVLHRAQLYSLNDYKPPISKAKMTQITKAAIKAIKFYKHVVQSVEKFIQKCKPE
YKVPGLYVIDSIVRQSRHQFGQEKDVFAPRFSNNIISTFQNLYRCPGDDKSKIVRVLNLW
QKNNVFKSEIIQPLLDMAGGIPPPVVTPVLPSTTAAMSNNTPGTPVTPVTPANVVQSLPD
PWVSQIANTDTLAAVAQILQSPQGQQLQQLIQTLQIQQQKPQPSLLQALDAGLVVQLQAL
TAQLTAAAAAANTLNPLEQSVSFNKKLMDRFDFGEESEQNEEPKKETPTSQLPLVPESVN
NSLFHQLAEQLQQQNLEHLRQQLLEQQQPQKASPEENQEGNFGSEHSASPSQGSSQQQFL
EVETNVDDSMDIQQQDMDIDEGQDVAEEEIFEQEEKKPAVRSRSRTRSRSRSRSPRKRRS
RSRSGSRKRKHRKRSRSRSRERKRKSSRSYSSERRAREREKERQKKGLPPIRSKTLSVCS
TTLWVGQVDKKATQQDLTNLFEEFGQIESINMIPPRGCAYVCMVHRQDAYRALQKLSSGS
YKIGSKIIKIAWALNKGVKTEYKQFWDVDLGVSYIPWEKVKLDDLEGFAEGGMIDQETVN
TEWETARSSEAAKENTQTTQSAAVDKSTVITTQTEAYTQPVTMLQIPVAPAVPAVSLVPP
AFPVTMSVPPPGYSAIPPPPFLRASFNPSQPPPGYMPPPVPPVVPPPVVPPPVVPPVVPT
PLVQPPLPIAQETMKDVPFTSLVLPVGTVTSNLATPTLSAGSVFNPLPINKPESDEKTSH
LTDLQISSSENNRSVQSDVSSSSGLVGGVQPPSVSSSSGLTGEGQPPSVSSSSGLAGGVQ
PPSVSSSSGLVGGVQPPTVSSSSGLAGGVQLPSVSSSSSLAGGVQPTSVSSSSGLMAGVQ
PPSVSSSSGLLAGVHPPSVSSSPGLLTGMQPPSVSSSSGVLAGVQPPSVSSNSGLLIMPP
PNVSSSSGLMGVPPPNISSSSGLLAMQHPAGVQNMPHLNIIAQKXKGMPLIDIRPGLMPH
SPGPRFPLMQPGIPPQRSIPPPAILDPSLHPPPRGPFPPGDIFNQTERPFGTPGRQNIDS
ISNQKKEIXLNRPSPVDVRDSVGRPPVDPREGIGRPPVDGREHFGRPHVDMRENFGRPGI
DNLGRREHFGFNSDKHWGQRGDYDEREHHAFPIYGGPKGFHEDRERFRHVNYRFDSRSGP
NWNRGFEQDAHRDFDDRRRPWERQRDRDDRDFNFCREINGNRFGRDRMSNNWIPPPHPRV
FEYFDGATSQRKADNMPQVNGENTETESQPPTAQVQDDPELYEKLTSSVEINKEKSDTEA
DIESEPVVESTETEGT
NT seq
4011 nt
NT seq
+upstream
nt +downstream
nt
atggaagtggacatttcctgcgtgctgcatagggctcagttgtactcgctaaatgattat
aagccacccatttctaaagctaaaatgacacagatcaccaaggcagcaatcaaggctata
aagttctacaagcacgttgtacagagtgttgagaaattcattcaaaagtgcaaaccagaa
tacaaggtacctggtctgtatgtgattgactccattgtaagacagtcccggcatcagttt
gggcaagaaaaggatgtatttgctccaagattcagcaataacatcatcagcactttccag
aacttgtaccgctgtcctggggatgacaagagtaaaattgttagagtgctaaacttatgg
cagaagaataatgtgttcaagagtgaaattattcagcctctcttggatatggcaggggga
attcctcctccagttgtgacccctgtcttgcccagcactacagctgctatgagcaacaat
acaccaggaacacctgtgactccagttacgccagccaatgtggtgcagagtttacctgat
ccttgggtatctcagattgctaatacagatacacttgctgctgttgcacagattttacag
agccctcaaggccaacagcttcagcagttgatacagacactgcagatacagcagcagaaa
cctcagccttcactacttcaagccctagatgctggtcttgtcgttcagttacaggccctc
acagcacaacttacagctgcagctgctgctgctaacacacttaatccactggaacagagt
gtctcttttaataagaagctgatggacaggtttgactttggggaagaatctgaacaaaat
gaagagcctaaaaaggaaactcccacttcccaacttcctttagtaccagaatctgtgaac
aactcactttttcaccaactagctgaacagctacagcaacaaaacttagaacatctcaga
caacagcttctggagcaacagcagcctcaaaaagcaagccctgaggagaatcaagaagga
aattttggttctgagcactctgcctcaccatcacaagggagtagtcagcagcagttttta
gaagtggaaacaaatgtagatgattcaatggatattcaacaacaggacatggatatagat
gaaggccaggatgttgctgaagaagagatttttgaacaagaagaaaagaaaccagctgtt
cgttcaagatcaagaactcgttcaagatctcgttcaaggtcaccaagaaaacgaaggtct
agatcacggtctggttctcgtaagcgtaaacacagaaaacgttcacgctcaagatcaagg
gaaaggaagagaaagtcatctcggtcatattccagtgaaagaagggctagggaaagggaa
aaagaacgtcagaaaaagggattgcctcctatacggtcaaaaacactaagtgtttgcagt
actactctttgggtaggtcaagtagacaagaaggctacacagcaagatttaactaacttg
tttgaagaatttggacaaatagagtctattaatatgattcccccaagaggttgtgcttat
gtctgtatggttcacagacaagatgcgtatcgtgctcttcagaaacttagttctgggtcc
tataaaattgggtctaaaattattaagattgcctgggctttgaataaaggcgtgaaaaca
gaatacaagcagttctgggatgtggatctgggagtttcatatattccttgggagaaagta
aaattggatgatttggagggctttgctgaaggtggcatgattgaccaggagacagtaaat
acagaatgggaaacagccagaagctcagaagctgctaaagaaaatactcaaactacacag
agcgctgcagttgataagagtacagttattacaacgcagacagaagcttacacacaacca
gtcactatgctgcagattccagtagctccagctgtgcctgctgttagcttggttccacct
gcgtttcctgtcacaatgtctgtccctcctcctggttatagcgcaattcctcctccaccc
ttcttgcgagcaagtttcaacccttcacagccacctccaggttatatgcctcccccagtt
ccacctgtggtcccgccacctgtggtcccaccacctgttgtcccaccagttgtcccaaca
cctttagtacagcctccattaccaattgcacaagagacaatgaaggatgttccttttact
agccttgttctaccagttggcacagtcacaagcaatctagctactccaacattatctgct
ggaagcgtttttaatcctctgccaatcaacaaaccagaatcagatgaaaagacatcacat
cttacagaccttcagatttcttccagtgaaaacaatagatctgtgcaaagtgatgtctcg
agtagctctggacttgttggaggagtgcagccacccagcgtctcaagcagttctgggctt
actggagaagggcaaccacccagtgtctcaagtagctctggacttgcagggggagtacag
ccacccagtgtttcaagcagctctggacttgtaggaggagtgcaaccaccaactgtttca
agtagttctggtctggcaggaggagtgcagctacctagtgtctccagtagctcttctctt
gctggcggagttcagccaaccagtgtctcaagtagctctggacttatggctggagtgcaa
ccacccagtgtctcaagtagctcagggcttctagctggagtgcatccacccagtgtctca
agcagccctggccttctgacaggaatgcagccacccagtgtctcaagcagctcaggagtt
ctggcaggagtacagccaccaagtgtctcaagcaactctgggcttctcataatgccgcca
cccaatgtttcaagtagttctggacttatgggagtgccgccaccaaatatttcaagcagt
tctggacttctggcaatgcagcatccagctggggttcaaaatatgcctcatttaaatatt
attgctcaaaaannaaaaggaatgcctctcattgatatccgtccaggcctaatgccccat
tcgcctggaccaaggtttccattaatgcagccaggaataccaccgcagcgcagtattcct
cctccagcaatccttgatccatcccttcacccaccacctcgaggtccttttcctccagga
gatatttttaatcaaacagaaagaccttttggaacaccaggaagacaaaatatcgatagc
atttctaatcaaaagaaagagatanatcttaacagaccatctccagtggatgttagagat
tctgttggacgaccaccagttgatccaagagagggtataggaaggcctccagtagatgga
agagaacattttggaagaccacatgtagacatgagagaaaattttggaagaccaggtata
gataaccttggtcgaagagagcattttggtttcaattcagacaagcactggggacagaga
ggagattatgatgaaagagagcaccatgccttccctatttatggtggccctaaaggcttc
catgaagacagagagaggtttcggcatgtaaactataggtttgatagcagaagtggtccc
aattggaatagaggatttgaacaagatgctcacagagattttgatgaccgcagaagaccc
tgggaaagacagagggatagggatgacagagattttaatttttgcagagaaattaatggg
aacaggtttggaagagacagaatgtcaaacaactggatcccccctccacatccacgggtt
tttgaatattttgatggggccacttcccaacgcaaagccgataatatgccccaggtaaac
ggtgaaaatacagagacagaaagtcagccaccaactgcacaggtgcaggacgatccagaa
ctttatgaaaaactgacatcttccgtcgagataaacaaagagaagagtgacacagaagct
gatatagaaagtgaaccagtggtagaaagcacagaaactgaggggacataa
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integrated database retrieval system
