Egretta garzetta (little egret): 104131171
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Entry
104131171 CDS
T05152
Symbol
ARID1B
Name
(RefSeq) AT-rich interactive domain-containing protein 1B isoform X2
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
egz
Egretta garzetta (little egret)
Pathway
egz03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
egz00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
104131171 (ARID1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
egz03000
]
104131171 (ARID1B)
03021 Transcription machinery [BR:
egz03021
]
104131171 (ARID1B)
03036 Chromosome and associated proteins [BR:
egz03036
]
104131171 (ARID1B)
Transcription factors [BR:
egz03000
]
Eukaryotic type
Helix-turn-helix
ARID
104131171 (ARID1B)
Transcription machinery [BR:
egz03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
104131171 (ARID1B)
Chromosome and associated proteins [BR:
egz03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
104131171 (ARID1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BAF250_C
ARID
ABC_ATPase
Motif
Other DBs
NCBI-GeneID:
104131171
NCBI-ProteinID:
XP_009642591
LinkDB
All DBs
Position
Unknown
AA seq
1822 aa
AA seq
DB search
MDPMVMKRPQLYGMGNPPHSQPQQSSPYPGQSYGPPGPQRYPVGMQGRAPAAMGGMQYPQ
QQIPPQYGQQGVSGYCQQGQQPYYNQQPQPQHLPPQAQYLSQAQQRYQAQQDMSQEGYGT
RSQPPMAPGKPNHEDLNLIQQERPSSLPVEVLASEDATFGHKDLSGSIDDLPTGTEATLS
SAVSASGSTSSQGEQSNPAQSPFSPHASPHLSGIPGGPSPSPVGSPVGSNQSRSGPISPA
SIPGSQMPPQPPGSQSESSSHPALSQSPMPQDRGFMAGKQRNPQMSQYGPQQTGPSMSPH
PSPGGQVHPGISSFQQSNSSGTYGPQMSQYGPQGNYSRPPTYSGVPNTSYSGPGPGMGIN
ANSQMHGQGPSQPCGTMPLGRMPSAGMQSRPFPGNMSSMTPNSPGMSQQGGPGMGPPMPT
VNRKAQEAAAAVMQAAANSAQTRQGNFPAMNQSGIMGSSSPYTQPMNNSSGLMNPQAPPY
SMAPNMVNSSTAPMGLADMMTPGESKLPLPLKADGKEEGPPQPESKSKDSYSSQGISQPP
TPGNLPVPSPMSPSSASISSFHGDESDSISSPGWPKTPSSPKSSSSTTTGEKITKVYELG
NEPERKMWVDRYLTFMEERGTPVASLPAVGKKPLDLFRLYVCVKEIGGLAQVNKNKKWRE
LATTLNVGTSSSAASSLKKQYIQYLFAFECKIERGEEPPPEVFSTGDTKKQPKIQPPSPA
NSGSLQGPQTPQSTGSNSMTEVPGDLKPPTPASTPHGQMTPMQGGRNSTVSVHDPFSDVS
DSAFPKRNSMTPNAPYQQGINMPDMMGRMPYEPNKDPFGGMRKVPGSNEPFMTPGQMPNS
GIQDMYNQSPSGAMSNMSMSQRQQFSYGSGYDRRSDHGLGPEGSMGPPGQSNMVPSNSDP
SMYSPNRYPGQQRHEPYGQQYPGQGPPSGQPPYGGHQPGMYPQQQNYKRHMDGMYGPPAK
RHEGDMYNMQYGNQQQEMYNQYSNAYTGPDRRPMQGQYPYPYNRERMQGPGQMQQHGIPP
QMIGGPMQSSSSSEGPQQNMWPTRNDMPYPYQNRQGPGGPAQAPPYPGMNRTDDMMVPDQ
RINHESQWPSHVNQRQPSYMSSSASMQPITRPPQSSYQTPPSMPNHISRAPSPASFQRSL
ENRMSPSKSPFLPSMKMQKVIPTVPVSQVTGPPPQPPPIRREITFPPGSVEASQPVLKPR
RKITSKDIVTPEAWRVMMSLKSGLLAESTWALDTINILLYDDSTVATFNLSQLSGFLELL
VEYFRKCLIDIFGILMEYEVGDPGHKALDHKAAKKDDSQSLAEDTGKEENDECIDYFDED
EEEGEDEKVEGEEKSIVFSTPGAIADPSERPKQASKFDKLPIKIVKKNNLFVVDRSDKLG
RVQEFDSGLLHWQLGGGDTTEHIQTHFESKMEIPPRRKAPPPLNSPSKKKDLEGKGESEE
QQEKSITATIDDVLSARPGALPEDSNSGSQTESSKFPFGIHQAKSHRNIKLLEDEPRSRD
ETPLCTITHWQDSLAKRCICVSNIVRSLSFVPGNDTEMSKHPGLVLILGKLILLHHEHPE
RKRAPQTYEKEEEEDKGVACSKDEWWWDCLEVLRDNTLVTLANISGQLDLSAYTESICLP
ILDGLLHWMVCPSAEAQDPFPTVGPNSVLSPQRLVLETLCKLSIQDNNVDLILATPPFSR
QEKLYATLVRYVGDRKNPVCREMSMALLSNLAQGDTLAARAIAVQKGSIGNLISFLEDGV
TMAQYQQSQHNLMHMQPPPLEPPSVDMMCRAAKALLAMARVDENRSEFLLHEGRLLDISI
SAVLNSLVASVICDVLFQIGQL
NT seq
5469 nt
NT seq
+upstream
nt +downstream
nt
atggatccgatggtcatgaagagacctcagttgtacggcatgggcaatcccccccactct
cagccgcagcagagcagcccctaccccgggcagtcctacggccctcctggcccccagcgc
tatcccgtgggaatgcagggccgagccccggcagccatgggaggaatgcagtatccacag
caacagataccgccccagtatggtcagcaaggtgtaagtggctactgccagcagggccag
cagccgtactacaaccagcagccgcagcctcagcatctaccaccccaggcacaatatctg
tcgcaggcccagcagaggtaccaggctcagcaggacatgtctcaggaaggctatggaacc
agatctcaacccccgatggccccaggaaagcctaaccatgaagacttgaatctaatccag
caagaaagaccatcaagcttaccagttgaagtcttggcctccgaggatgctacatttgga
cacaaggatttatctggatccattgatgacttgccgactggaaccgaagcaaccctgagc
tcagccgttagcgcatcaggctctacgagcagccaaggggagcagagcaaccctgcacag
tctccgttctcccctcatgcttctccacatctctctggcatcccagggggcccatcgcct
tcccctgtaggctctcccgttggaagcaaccagtcgagatctggtcccatttctccagcg
agtattccaggcagtcagatgccaccgcagcctcctggcagccagtcagaatccagctcc
caccctgccttgagccagtcaccaatgccacaggaccgaggttttatggcagggaaacag
aggaacccccaaatgtcccagtatggacctcagcaaactggaccttccatgtcaccacac
ccctcacctggaggccaggtgcatcctggaatcagtagctttcagcagagtaattcgagt
ggtacttatgggcctcagatgagccagtatggaccacaaggaaactactccagaccaccg
acgtacagcggcgtgcccaacacaagttacagtggcccaggacccggcatgggtataaat
gccaacagtcagatgcatggacaggggccaagccagccttgcggtaccatgcccctggga
cggatgccatcagctgggatgcagagcagaccatttcctggaaacatgagcagcatgact
cccaattctcctggcatgtctcagcagggaggccccgggatgggcccacccatgccaact
gtgaatcgtaaggcacaggaggcggctgctgcggtgatgcaggctgctgcaaactccgct
cagaccaggcaaggcaattttcctgccatgaatcagagcggtattatgggatccagctcc
ccctacactcagccgatgaacaacagctctggcttgatgaacccgcaggctcctccttac
agcatggcacctaacatggtgaacagttcaacagcacctatgggtcttgcagatatgatg
acacccggtgagtccaaactaccccttcctctcaaagcagatggcaaagaagaaggacct
ccccagcccgagagcaagtcaaaggatagctacagctctcagggtatttctcagccccca
accccaggcaacctgccagtcccttccccaatgtccccaagctctgctagcatctcctca
tttcatggagatgaaagtgatagcattagcagcccaggctggccaaagactccatcaagc
cctaaatcaagttcctctaccacaactggagagaagatcacaaaagtctatgaactagga
aacgagccagagcgcaagatgtgggtagatcggtacctcacgttcatggaggagaggggc
acgcctgtggccagtctgccagctgtgggcaagaagcccctggacctgttcaggctctat
gtctgcgtcaaagagattggaggcttagcacaggttaataaaaacaagaagtggcgtgag
ctggcaaccaccttgaacgttggcacttcgagcagcgcggccagctccctgaaaaaacaa
tacattcagtacctgtttgccttcgagtgcaagattgaacgaggggaggagccccctcca
gaagtcttcagcactggagataccaagaaacaacctaagattcagccgccatctcctgcg
aattctggttccttgcaaggtccacagactccacagtctacaggtagtaattccatgaca
gaagtgccaggcgatttgaagcccccaacaccagcatcaacacctcatggacagatgaca
cctatgcagggtggcagaaacagcacagttagtgtgcatgatcccttttctgatgtaagt
gattcagcattcccgaagcgaaactccatgacgccaaatgcaccataccagcagggaata
aacatgccagatatgatgggaaggatgccatatgaaccgaataaagatccttttggtgga
atgagaaaagtgcctggaagcaatgagcctttcatgacccctggacaaatgcctaacagt
ggaatacaagatatgtataaccagagtccatccggagcaatgtccaacatgagcatgagc
cagcgacagcagttctcttatggaagtggctatgacaggaggtcggatcatgggctgggt
cctgaaggcagtatgggaccacctggtcaaagcaacatggtgccttcaaacagtgaccca
agcatgtactctcctaatcgttaccctggccagcaaaggcatgaaccatacgggcagcag
tatccaggacaaggacctccctcaggacagccaccatatggaggacatcaacctggaatg
tatccacagcagcagaactataaacgacacatggatggcatgtacgggcctccagccaaa
cgccatgaaggggatatgtataacatgcagtatggcaaccagcaacaggaaatgtataac
cagtacagcaacgcttacacagggcctgacaggaggcccatgcagggacagtatccgtat
ccatataacagggagaggatgcagggcccaggacaaatgcagcagcatggaatacctccc
cagatgattggtggccccatgcagtcatcatcttccagtgaaggtcctcagcagaacatg
tggccaacacgaaatgatatgccttacccttaccagaataggcaaggtccaggaggccct
gcacaggccccaccgtatccagggatgaatcgcactgatgatatgatggtacctgaccag
aggataaaccacgagagtcagtggccttctcatgtcaaccaacgtcagccttcttatatg
tcatcctcagcctccatgcagcctatcactagacctcctcagtcatcctaccagacgcca
ccctctatgccaaaccacatctctagagctccaagcccagcatccttccagcgctctttg
gaaaaccgtatgtctccaagcaagtctcctttcctaccctccatgaagatgcaaaaggtt
atacccacagttccagtgtcacaggtcacaggacctccaccccaaccaccaccaattagg
cgagaaattaccttccccccaggctccgtagaagcatcccaaccagtcttaaaaccaaga
cgaaagattacctcaaaagatattgtaactcctgaggcctggagagtgatgatgtctctt
aaatctggtcttttggctgaaagtacctgggcgctagacactattaatattcttctgtat
gatgacagcactgttgctactttcaacctctctcagttgtctggatttcttgagctttta
gtagaatattttagaaaatgcctgattgacatttttggaatccttatggaatatgaagtg
ggagatccaggccacaaagcacttgatcacaaagcagccaagaaagatgatagccagtcc
ttggcagaggatactggaaaagaggagaacgacgaatgtattgactattttgatgaagat
gaggaggagggggaggatgaaaaggtagaaggagaagaaaagagcattgttttttccact
cctggtgccattgctgatccaagtgagaggccaaaacaagccagtaaatttgacaagctg
ccaataaagattgtaaagaaaaataatctatttgttgttgaccgatctgacaaacttgga
cgcgttcaggaatttgatagtggacttctccactggcagcttggtggcggtgacacaact
gagcatatccagactcactttgaaagcaagatggagattcctccacgcaggaaagcccct
cctcccttgaactctccaagcaaaaagaaggacctcgaggggaaaggtgaatctgaggaa
caacaagaaaaaagtataacagcaaccattgatgatgtcctctcagctcggccaggagca
ttgcctgaagactcaaactctggttcccaaacagagagcagtaaattcccctttgggatc
catcaagccaaaagccaccggaatattaaactgctagaggatgagccaaggagccgggat
gagactcctctatgcaccataactcactggcaagactccttggccaaacgctgcatctgt
gtgtcaaatatcgtccgtagcttgtcttttgtgcctggcaatgacaccgaaatgtccaaa
catccaggcttggtgctgatcctgggaaagttgatccttcttcaccatgagcatccagaa
agaaagcgagcgccgcagacttatgagaaagaggaagaggaggacaaaggggtggcctgc
agcaaggatgagtggtggtgggactgcctcgaggtcttgcgggataatacattggtcaca
ttagccaacatttctgggcagctagacttgtctgcttacacagaaagcatctgtttgcca
attttggatggcttgctgcactggatggtgtgcccatctgcggaggcacaggatcctttt
ccaaccgtggggcccaactcggttctttcgcctcagagacttgtgctggagaccctgtgt
aagctcagtatccaggacaataatgtggaccttatcttggccacccccccattcagtcgt
caggagaaactctatgctactttagttaggtacgttggggaccgcaaaaacccggtctgc
cgagaaatgtccatggcgctcttatcgaaccttgcccagggggacacattagcagcaagg
gcaatagctgtgcagaagggaagcatcggaaacttgataagcttcctggaggatggggtc
actatggcccagtaccagcagagccagcataacctcatgcacatgcagcctccacctctg
gagccacctagtgtagacatgatgtgcagggcagccaaggccttgctggccatggctaga
gtggacgagaaccgctcagagttccttttgcacgagggtcgtttgctggatatctcaata
tctgctgtcctgaactctctggttgcatctgtcatctgtgatgtactttttcagattggg
cagttatga
DBGET
integrated database retrieval system
