Egretta garzetta (little egret): 104131304
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Entry
104131304 CDS
T05152
Symbol
VPS8
Name
(RefSeq) LOW QUALITY PROTEIN: vacuolar protein sorting-associated protein 8 homolog
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
egz
Egretta garzetta (little egret)
Pathway
egz04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
egz00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
104131304 (VPS8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
egz04131
]
104131304 (VPS8)
Membrane trafficking [BR:
egz04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
104131304 (VPS8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
zf_RING_Vps8
VPS8_N
Beta-prop_WDR36-Utp21_1st
zf-RING_Vps41
TPR_VPS8_2
WD40_CDC20-Fz
Clathrin
TPR_Vps41
zf-RING_11
zf_RING_Vps8_fungal
zf-RING_2
Beta-prop_WDR5
zf-RING_UBOX
Beta-prop_WDR3_1st
WDR55
Beta-prop_HPS5
Motif
Other DBs
NCBI-GeneID:
104131304
NCBI-ProteinID:
XP_035755838
LinkDB
All DBs
Position
Unknown
AA seq
1365 aa
AA seq
DB search
MQFLLVGKTQIDDKEFDIPQVDTPPTLESILNETDDEEESFILEDPFLLNIDNTDTHSYD
TSSVASSDSGDRTHLKRKKKLPDSLLLHGSVIRLSLLKGISAQIVSAADKVDAGLPTAIA
ASNLIAVGTSHGLALIFDQNQALRLCLGSTAVGAQYGAISALSINNDCSRLLCGFAKGQI
TMWDLASGKLLRSITDAHPPGTAILHIKFTDDPTLAICNDSGGSVFELSFKRVMGVRTCE
SRCLFSGSKGEVCCIEPLHAKVELRDHPITQYSLLAMASLTKILVIGLKPSLXILAVFFL
XQMDPSSVPLLAWHFVAVQNSVNPMLAFCRGDVVHFLLVKRDDTGAIHVTKQRQLHLHYD
LINFTWINSRTAVLLDSVEKLHVIDRQTQEELETIEISEVQLVYNSSHFKSLATGGNVSE
ALALVGEKACYQSISSCGGQIFYLGTKSVHVMTLRSWRERVDHLLKQERLTDALALAWSF
YEGKAKAVVGLSGDTSKRKAVIADRMVEILLHYTDRTLKKCPDQGKIQVMEQHFQDVVPV
IVDYCLLLQRTDLLFNQVYDKMSENSVAKGIFLECLEPYILSDKLMGITAQVMKDLLLHF
QDKNRLENLEACIVHMDITSLDIQQVVLLCWENHLYDAMIYVYNSGMNDFISPMEKLFKV
IAPPLNAGKSLTDEQVVMGNKLLVYISCCLAGRAYPLGDIPQDLVPLVKNQVFEFLIRLH
STEGSVDEEVYPYVRTLLHFDTREFLNVLALTFEDFKNDKQAVEYQQRIVDILLKVMVEN
SDFTPSQVGCLFTFLARQLAKPNNTLFVNRTLFDQVLEFLCSPDDDSRHSERQQVLLELL
QAGGIVQFEESRLIQMAEKAEFYQICEFMYERELRYDKIIGCYLHDPVRKEEVFNYIHNI
LSMPGYSAEEKQSVWQKALEHIEELLLLSPCKAADLVAIHYSEQIESIITNLQDQFLLFQ
FLRSLLDPREGINQDLIHLPPCITEQFIELLCQYSPDQVLETLKVLEYCRLEETIQITQK
HQLHEASSYLLEKKGDIHGAFLVMLERLQSKLLMLTQDDESSTELPLLENVEDTLMKTIA
LCRRNSHNLDQQQREALWFPLLEAMMSPQKLSGSSQCRYSESLKSLTMQVLNNMAAFIAL
PSILQRILQDPVYGKGKLGEIQGLVLGMLDTFNYEQTLLETTTNLLNHDLHWSLCNLRAS
VTRGLTPKQDYCCICLQQYKRRQETADEIIVFSCGHLYHSLCLLSKECGTVTKGLMRWMC
YKCNSSNKGGKLSENFSQLKKGSGASLAQTSSESLLDPQQIQAFDQLCRLNRGTSRLALL
TELSRGHGGEKHGLLSVSHGDPATSSVFQNENFQLHLAPPPLAED
NT seq
4098 nt
NT seq
+upstream
nt +downstream
nt
atgcagtttttgctggtgggcaaaacgcagatcgatgacaaagaattcgacattcctcaa
gttgatactcctccaaccctggagagcatcttaaatgagacagatgatgaagaagagtct
ttcattttggaggatccctttcttttgaacatagacaacacggatacacactcctatgac
acctcttctgtagcaagctctgacagtggggaccggacacacctgaaaaggaagaaaaaa
ctcccagattctctcttactccatgggtcagttatacgtctctcgcttctgaaaggaatt
tctgcccaaatagtatctgcagcagacaaagtggatgctggcttgcccactgcaattgca
gcatcaaatctgatagcagtggggacttcccatgggttagcactgatatttgatcaaaat
caggctcttcggctgtgtctgggcagcactgctgttggggcccagtatggggctatctct
gctctcagtatcaacaacgactgctcaaggctcctgtgtggctttgccaaaggacagatc
acaatgtgggatctggccagtgggaagctgctgcgatcaataacagatgcccatccacca
ggaacagccattttgcacatcaagtttacagatgacccaacgcttgccatttgcaatgac
agcggaggctccgtatttgaactgtcatttaagagggttatgggagtgagaacctgtgaa
tctcgatgtctcttcagtggctcaaagggggaagtctgctgtatcgaaccattacatgca
aaagttgagctgagagaccatcctatcacccagtattcactgctggccatggcctcccta
acaaagatactggttattggcctgaagccatctctgnaaatactggctgtgttttttctc
taacagatggacccttctagtgtccctcttctggcgtggcactttgtggctgtacagaac
tctgtgaaccccatgcttgcattttgtcgaggagatgttgttcattttcttctggtaaag
agggatgatactggtgcaatacacgtcactaagcagaggcagcttcatttacactatgac
ctcatcaactttacttggataaactcacggacagcagtgcttctggacagtgtggagaag
ctgcacgttatagatcgtcagacacaggaggagctggagaccatagagatctcagaagtt
cagctagtctacaacagcagccacttcaaatcgctggctacaggaggcaacgtcagtgaa
gccctggcattggttggagagaaagcttgttatcagtccatcagcagctgtggtggtcag
atcttttacctgggaactaagtctgttcacgtcatgacattgagaagctggagagagaga
gttgaccaccttctgaaacaagagcgtctcactgatgccctggctctagcttggtctttt
tatgaaggtaaagcaaaggctgtagtaggcttgtctggggacacaagcaagcggaaagca
gtcattgcagacagaatggttgaaatccttctccattacactgatcggactttgaagaaa
tgtcctgaccaaggaaaaatccaagttatggagcaacattttcaggacgtggtgcctgtc
atagttgattactgtctcttactccagcgcacggatctattatttaaccaggtatatgat
aagatgagtgagaattctgtagctaaaggcatctttctggagtgcttggagccatatatc
ttaagtgataagctgatgggaatcacagctcaagtgatgaaagacttgctgcttcacttc
caagacaagaacaggttggaaaatttggaagcctgcattgtgcatatggatatcaccagc
ttagacatacagcaggtagttcttctgtgctgggaaaaccatctctatgatgccatgatc
tatgtctacaacagtgggatgaatgacttcattagtcccatggagaagctgttcaaagtc
attgctcctccactgaatgccgggaagtctctcacagatgagcaggtggtgatgggcaac
aagctacttgtatatataagctgctgcttggcaggccgtgcatatccattgggtgatatt
cctcaagatctggtgcctttggttaaaaatcaggtctttgaatttctcatccggctgcat
tcaactgagggatctgtggatgaagaggtctacccttatgttcgtaccttgctgcacttt
gacactcgggagttccttaatgttcttgctctgacttttgaagactttaagaatgacaag
caagctgtggaatatcagcagagaattgtggacatacttctgaaagtcatggtagagaat
tctgacttcaccccgtcacaggttggctgtctctttaccttccttgctcgtcagctcgcc
aagcccaacaacacattgtttgtgaacaggacgctttttgaccaggtccttgagtttctg
tgcagtccagatgatgactcccgccattcagagaggcaacaggtccttttagaattgctc
caggcaggagggatagtacagtttgaagagagccgtcttatccaaatggcagaaaaagca
gaattctaccagatttgtgagttcatgtatgaacgggagcttcgctatgacaaaataatt
ggctgttacctgcatgatccggtgagaaaggaagaagttttcaactatattcacaacatc
ctatccatgccgggctacagtgctgaagaaaagcagtcagtgtggcagaaagctttggag
catatagaggagttgctgttgctgagcccatgtaaagcagctgacttggtggccattcac
tacagtgagcagattgagagcatcattacaaacctccaggaccagtttttactcttccag
tttctgaggagtcttcttgatccgagagaaggcattaaccaagacctcatacacttgcca
ccctgcatcactgagcagttcattgagctgctgtgtcagtacagcccggaccaggttttg
gagacacttaaagtcctggaatactgcagactggaagaaaccatccagataacccagaaa
catcagctccatgaagcttcttcatatttactggaaaagaagggagatatccatggtgcc
tttctggttatgcttgagcgattgcagagcaagttgctgatgcttacgcaagatgatgaa
agctcaactgaactccccttgctagaaaatgttgaagatactttaatgaaaacaattgcc
ctttgccggagaaattcacacaatttagaccagcaacagcgagaggccctctggtttccc
ctgctggaggctatgatgtccccacagaaattatctggttcttcacagtgtcgatactct
gaatctttgaagagtttgacaatgcaagtgctgaacaacatggctgcatttattgctctt
ccttcaatcctgcagagaattctacaggatccagtttatggaaaagggaaacttggagaa
attcaaggacttgtcctgggaatgctagacacttttaactatgaacaaacccttttagag
acgactacgaatcttttaaaccatgatctccactggtctctgtgtaacctaagagcttct
gtcactagagggcttaccccaaagcaggattactgctgcatttgtctacagcagtacaaa
aggcggcaagaaactgctgatgaaatcattgttttcagctgtggccacttgtaccattcg
ctgtgtctgctgagtaaagagtgtgggacagtaaccaaaggcctgatgaggtggatgtgc
tataaatgcaactcaagtaacaagggaggaaaactgagcgagaacttctcacagctaaaa
aaaggaagcggagcatccttggcacagacaagttcagagtctctgttggatcctcagcaa
atccaagcttttgaccaactctgccgactcaaccgaggaacctccagactagctctcctg
acggagctgtcccgcggccacggcggggagaagcacgggctgctcagcgtttcccacggt
gacccggccaccagcagtgtcttccagaacgagaacttccagctccatctggccccccct
ccactggccgaagactag
DBGET
integrated database retrieval system
