KEGG   Egretta garzetta (little egret): 104131568
Entry
104131568         CDS       T05152                                 
Symbol
CDC40
Name
(RefSeq) pre-mRNA-processing factor 17
  KO
K12816  pre-mRNA-processing factor 17
Organism
egz  Egretta garzetta (little egret)
Pathway
egz03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:egz00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    104131568 (CDC40)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:egz03041]
    104131568 (CDC40)
Spliceosome [BR:egz03041]
 Complex C
  Other components
   Step II factors
    104131568 (CDC40)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WDR55 WD40_WDHD1_1st EIF3I WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_EIPR1 Beta-prop_RIG_2nd ANAPC4_WD40 Beta-prop_TEP1_C WD40_RFWD3 Beta-prop_DCAF4 WD40_MABP1-WDR62_1st Beta-prop_IFT122_1st Beta-prop_SPT8 Beta-prop_SCAP WDR90_beta-prop_4th Beta-prop_NWD2_C WD_LRWD1 Beta-prop_Vps41 PQQ_2
Other DBs
NCBI-GeneID: 104131568
NCBI-ProteinID: XP_035756186
LinkDB
Position
Unknown
AA seq 492 aa
MFAPEFGPENPFRTRQMAAPRNMLSGYAEPAHINDFMFEQQRRTFATYGYALDPSIDNPE
VATKYIGSVEEAEKNQGLTVFETGQRKIEKRKKFKENDASNIDGFLGPWAKYIDEKEVAK
PSEEEQKELDEITAKRQKRGKLEDDKPGEEKTILHVKEMYDYQGRSYLHVPQDVGVNLRS
TVPPEKCYLPKKQIHVWSGHTKGVSAVRLFPLSGHILLSCSMDCKIKLWEVYGDRRCLRT
FIGHSKAVRDICFNNAGTRFLSAAYDRYLKLWDTETGQCISRFTNRKVPYCVKFNPDEDK
QNLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLRVWEW
DIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQSMDNQILIFGAQNRFRLNKKKIFKGHMV
AGYACQVDFSPDMSYVISGDADGKLNIWDWKTTKLYSRLKAHDKVCIGAVWHPHETSKVI
TCGWDGLIKLWD
NT seq 1479 nt   +upstreamnt  +downstreamnt
atgtttgcacccgagtttggaccagaaaacccatttaggactcgacaaatggctgcacct
agaaatatgctttctggatatgcagaaccagctcacatcaatgatttcatgtttgaacaa
caaagaagaacatttgcaacctatggttatgcattagatccttctatagataaccctgaa
gttgctaccaaatatattggttctgtagaagaagctgaaaaaaatcaaggtttaacagtg
tttgaaacaggacaaaggaaaattgaaaaaaggaagaaattcaaggagaatgatgcatct
aatattgatgggtttctgggaccatgggcaaagtatattgatgaaaaagaagtagccaaa
ccatcagaagaagaacagaaagagttggatgaaataacagccaagaggcagaagagagga
aaactagaagatgataaacctggagaagagaagactatattacatgttaaggaaatgtat
gactatcaggggagatcttatcttcatgttcctcaagatgttggagttaatctccgttct
acagtgccacctgagaagtgctatcttccaaagaaacaaatccatgtgtggtctggacat
acgaagggtgtcagtgcagttagattgtttcctctctctgggcatatactgttgtcttgc
tctatggattgcaaaattaagctatgggaagtatatggtgatcgaagatgtctacgaaca
tttattggacacagtaaagctgttcgagacatctgtttcaataatgctggcactcggttt
ctcagtgctgcatatgaccgctatcttaaactctgggacactgaaacagggcaatgtatt
tcaagattcacaaacaggaaggttccttactgtgtcaagttcaatcctgatgaagataaa
caaaatctctttgttgcaggaatgtctgataagaaaattgtgcagtgggatattcgaagt
ggtgagattgtgcaggaatacgataggcatttgggagctgtcaacaccattgtgtttgtg
gatgaaaatagaaggtttgtgagtacatctgatgacaagagtttaagagtctgggaatgg
gacattcctgtagacttcaagtacatagctgagccaagtatgcattcgatgccagccgtg
actttgtctccaaatgggaagtggttggcttgccagtcgatggataaccaaattctgatt
tttggagctcagaacagattcaggttaaacaaaaagaaaattttcaaaggtcacatggta
gctggctacgcttgtcaagtggatttttcacctgacatgagctacgtgatatctggagat
gcagatggaaaacttaacatctgggactggaagacaacaaaactctacagcagattaaaa
gcacatgacaaagtctgtattggtgcagtgtggcatccacatgaaacgtctaaagtcatt
acatgcggctgggacggtcttattaaactatgggactag

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