Egretta garzetta (little egret): 104131568
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Entry
104131568 CDS
T05152
Symbol
CDC40
Name
(RefSeq) pre-mRNA-processing factor 17
KO
K12816
pre-mRNA-processing factor 17
Organism
egz
Egretta garzetta (little egret)
Pathway
egz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
egz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104131568 (CDC40)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
egz03041
]
104131568 (CDC40)
Spliceosome [BR:
egz03041
]
Complex C
Other components
Step II factors
104131568 (CDC40)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WDR55
WD40_WDHD1_1st
EIF3I
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_EIPR1
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_TEP1_C
WD40_RFWD3
Beta-prop_DCAF4
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
Beta-prop_SPT8
Beta-prop_SCAP
WDR90_beta-prop_4th
Beta-prop_NWD2_C
WD_LRWD1
Beta-prop_Vps41
PQQ_2
Motif
Other DBs
NCBI-GeneID:
104131568
NCBI-ProteinID:
XP_035756186
LinkDB
All DBs
Position
Unknown
AA seq
492 aa
AA seq
DB search
MFAPEFGPENPFRTRQMAAPRNMLSGYAEPAHINDFMFEQQRRTFATYGYALDPSIDNPE
VATKYIGSVEEAEKNQGLTVFETGQRKIEKRKKFKENDASNIDGFLGPWAKYIDEKEVAK
PSEEEQKELDEITAKRQKRGKLEDDKPGEEKTILHVKEMYDYQGRSYLHVPQDVGVNLRS
TVPPEKCYLPKKQIHVWSGHTKGVSAVRLFPLSGHILLSCSMDCKIKLWEVYGDRRCLRT
FIGHSKAVRDICFNNAGTRFLSAAYDRYLKLWDTETGQCISRFTNRKVPYCVKFNPDEDK
QNLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLRVWEW
DIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQSMDNQILIFGAQNRFRLNKKKIFKGHMV
AGYACQVDFSPDMSYVISGDADGKLNIWDWKTTKLYSRLKAHDKVCIGAVWHPHETSKVI
TCGWDGLIKLWD
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgtttgcacccgagtttggaccagaaaacccatttaggactcgacaaatggctgcacct
agaaatatgctttctggatatgcagaaccagctcacatcaatgatttcatgtttgaacaa
caaagaagaacatttgcaacctatggttatgcattagatccttctatagataaccctgaa
gttgctaccaaatatattggttctgtagaagaagctgaaaaaaatcaaggtttaacagtg
tttgaaacaggacaaaggaaaattgaaaaaaggaagaaattcaaggagaatgatgcatct
aatattgatgggtttctgggaccatgggcaaagtatattgatgaaaaagaagtagccaaa
ccatcagaagaagaacagaaagagttggatgaaataacagccaagaggcagaagagagga
aaactagaagatgataaacctggagaagagaagactatattacatgttaaggaaatgtat
gactatcaggggagatcttatcttcatgttcctcaagatgttggagttaatctccgttct
acagtgccacctgagaagtgctatcttccaaagaaacaaatccatgtgtggtctggacat
acgaagggtgtcagtgcagttagattgtttcctctctctgggcatatactgttgtcttgc
tctatggattgcaaaattaagctatgggaagtatatggtgatcgaagatgtctacgaaca
tttattggacacagtaaagctgttcgagacatctgtttcaataatgctggcactcggttt
ctcagtgctgcatatgaccgctatcttaaactctgggacactgaaacagggcaatgtatt
tcaagattcacaaacaggaaggttccttactgtgtcaagttcaatcctgatgaagataaa
caaaatctctttgttgcaggaatgtctgataagaaaattgtgcagtgggatattcgaagt
ggtgagattgtgcaggaatacgataggcatttgggagctgtcaacaccattgtgtttgtg
gatgaaaatagaaggtttgtgagtacatctgatgacaagagtttaagagtctgggaatgg
gacattcctgtagacttcaagtacatagctgagccaagtatgcattcgatgccagccgtg
actttgtctccaaatgggaagtggttggcttgccagtcgatggataaccaaattctgatt
tttggagctcagaacagattcaggttaaacaaaaagaaaattttcaaaggtcacatggta
gctggctacgcttgtcaagtggatttttcacctgacatgagctacgtgatatctggagat
gcagatggaaaacttaacatctgggactggaagacaacaaaactctacagcagattaaaa
gcacatgacaaagtctgtattggtgcagtgtggcatccacatgaaacgtctaaagtcatt
acatgcggctgggacggtcttattaaactatgggactag
DBGET
integrated database retrieval system