KEGG   Egretta garzetta (little egret): 104131756
Entry
104131756         CDS       T05152                                 
Symbol
HMGB1
Name
(RefSeq) high mobility group protein B1
  KO
K10802  high mobility group protein B1
Organism
egz  Egretta garzetta (little egret)
Pathway
egz03410  Base excision repair
egz04140  Autophagy - animal
egz04217  Necroptosis
Brite
KEGG Orthology (KO) [BR:egz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    104131756 (HMGB1)
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    104131756 (HMGB1)
  09143 Cell growth and death
   04217 Necroptosis
    104131756 (HMGB1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:egz03036]
    104131756 (HMGB1)
   03400 DNA repair and recombination proteins [BR:egz03400]
    104131756 (HMGB1)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:egz04147]
    104131756 (HMGB1)
Chromosome and associated proteins [BR:egz03036]
 Eukaryotic type
  Nucleosome assembly factors
   HMG (high mobility group) proteins
    104131756 (HMGB1)
DNA repair and recombination proteins [BR:egz03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     104131756 (HMGB1)
   MMR (mismatch excision repair)
    Other MMR factors
     104131756 (HMGB1)
Exosome [BR:egz04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   104131756 (HMGB1)
SSDB
Motif
Pfam: HMG_box_2 HMG_box HMG_WDHD1 RNA_pol_3_Rpc31 HMG_box_5
Other DBs
NCBI-GeneID: 104131756
NCBI-ProteinID: XP_009643258
UniProt: A0A091IR01
LinkDB
Position
Unknown
AA seq 215 aa
MGKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSSKEKGKF
EDMAKADKLRYEKEMKNYVPPKGETKKKFKDPNAPKRPPSAFFLFCSEFRPKIKGEHPGL
SIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKVDAGKKVVAKAEK
SKKKKEEEEDEDEDEEDEDDEEEEEEEDEDDDDDE
NT seq 648 nt   +upstreamnt  +downstreamnt
atgggcaaaggcgatcctaagaagccgagaggtaaaatgtcttcatacgccttctttgtg
caaacctgccgggaggagcacaagaagaaacatccagatgcttcagtgaacttttcagag
ttctcaaaaaaatgctcagaacgatggaagactatgtcttctaaggagaaagggaagttt
gaagatatggcaaaggctgacaagcttcgttatgaaaaagaaatgaaaaactatgtacca
ccgaagggggaaacaaaaaagaagttcaaggatccaaatgcaccgaagaggcctccttcg
gcttttttcttgttttgctctgagtttcgtccaaaaatcaaaggagaacatcctggtctg
tccattggggacgtcgcaaagaaactgggagagatgtggaacaacaccgctgcagatgac
aaacagccttatgaaaaaaaggctgctaaactgaaggagaagtatgaaaaggatattgct
gcataccgggccaaagggaaggttgatgcaggcaaaaaagtagttgccaaggctgagaag
agcaagaagaagaaggaggaggaagaagatgaggatgaagacgaagaggatgaagatgat
gaagaagaggaagaggaggaggatgaagatgatgatgatgacgaataa

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