Egretta garzetta (little egret): 104131827
Help
Entry
104131827 CDS
T05152
Symbol
PRPF8
Name
(RefSeq) LOW QUALITY PROTEIN: pre-mRNA-processing-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
egz
Egretta garzetta (little egret)
Pathway
egz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
egz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104131827 (PRPF8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
egz03041
]
104131827 (PRPF8)
Spliceosome [BR:
egz03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
104131827 (PRPF8)
Complex C
U5 SnRNP specific factors
104131827 (PRPF8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
104131827
NCBI-ProteinID:
XP_009643329
LinkDB
All DBs
Position
Unknown
AA seq
2407 aa
AA seq
DB search
MFLKARIVLPHSYHHVDAVYPGARVVVGQGSLVWESDVIFPQCYSGISGSFAAHCGQTPG
AARKLIGHPSWLRAPPTSGSLSAPVPSPLAPLPDYISEEKLQEKASKWQQLQAKRYAEKR
KFGFVDAQKEDMPPEHVRKIIRDHGDMTNRKFRHDKRVYLGALKYMPHAVLKLLENMPMP
WEQIRDVPVLYHITGAISFVNEIPWVIEPVYIAQWGSMWIMMRREKRDRRHFKRMRFPPF
DDEEPPLDYADNILDVEPLEAIQLELDPEEDAPVLDWFYDHQPLKDNKKYVNGSTYQRWQ
FTLPMMSTLYRLANQLLTDLVDDNYFYLFDLKAFFTSKALNMAIPGGPKFEPLVRDINLQ
DEDWNEFNDINKIIIRQPIRTEYKIAFPYLYNNLPHHVHLTWYHTPNVVFIKTEDPDLPA
FYFDPLINPISHRHSVKSQEPLPDDDEEFELPEFVEPFLKDTPLYTDNTANGIALLWAPR
PFNLRSGRTRRALDIPLVKNWYREHCPAGQPVKVRVSYQKLLKYYVLNALKHRPPKAQKK
RYLFRSFKATKFFQSTKLDWVEVGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKT
LTTKERKKSRFGNAFHLCREVLRLTKLVVDSHVQYRLGNVDAFQLADGLQYIFAHVGQLT
GMYRYKYKLMRQIRMCKDLKHLIYYRFNTGPVGKGPGCGFWAPGWRVWLFFMRGITPLLE
RWLGNLLARQFEGRHSKGVAKTVTKQRVESHFDLELRAAVMHDILDMMPEGIKQNKARTI
LQHLSEAWRCWKANIPWKVPGLPTPIENMILRYVKAKADWWTNTAHYNRERIRRGATVDK
TVCKKNLGRLTRLYLKAEQERQHNYLKDGPYITAEEAVAVYTTTVHWLESRRFSPIPFPP
LSYKHDTKLLILALERLKEAYSVKSRLNQSQREELGLIEQAYDNPHEALSRIKRHLLTQR
AFKEVGIEFMDLYSHLVPVYDVEPLEKITDAYLDQYLWYEADKRRLFPPWIKPADTEPPP
LLVYKWCQGINNLQDVWETSEGECNVMLESRFEKMYEKIDLTLLNRLLRLIVDHNIADYM
TAKNNVVINYKDMNHTNSYGIIRGLQFASFIVQYYGLVMDLLVLGGLPPASEMAGPPQMP
NDFLSFQDIATEVAHPIRLFCRYIDRIHIFFRFTADEARDLIQRYLTEHPDPNNENIVGY
NNKKCWPRDARMRLMKHDVNLGRAVFWDIKNRLPRSVTTVQWENSFVSVYSKDNPNLLFN
MCGFECRILPKCRTSYEEFTHKDGVWNLQNEVTKERTAQCFLRVDDESMQRFHNRVRQIL
MASGSTTFTKIVNKWNTALIGLMTYFREAVVNTQELLDLLVKCENKIQTRIKIGLNSKMP
SRFPPVVFYTPKELGGLGMLSMGHVLIPQSDLRWSKQTDVGITHFRSGMSHEEDQLIPNL
YRYIQPWESEFIDSQRVWAEYALKRQEAIAQNRRLTLEDLEDSWDRGIPRINTLFQKDRH
TLAYDKGWRVRTDFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHT
LFKGTYFPTWEGLFWEKASGFEESMKWKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVY
VGFQVQLDLTGIFMHGKIPTLKISLIQIFRAHLWQKIHESIVMDLCQVFDQELDALEIET
VQKETIHPRKSYKMNSSCADILLFASYKWNVSRPSLLADSKDVMDSTTTQKYWIDIQLRW
GDYDSHDIERYARAKFLDYTTDNMSIYPSPTGVLIAIDLAYNLHSAYGNWFPGSKPLIQQ
AMAKIMKANPALYVLRERIRKGLQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRV
TIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAAL
IRSLPVEEQPKQIIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACLKVEKFGDLILK
ATEPQMVLFNLYDDWLKTISSYTAFSRLILILRALHVNNDRAKVILKPDKTTITEPHHIW
PTLTDEEWIKVEVQLKDLILADYGKKNNVNVASLTQSEIRDIILGMEISAPSQQRQQIAE
IEKQTKEQSQLTATQTRTVNKHGDEIITSTTSNYETQTFSSKTEWRVRAISAANLHLRTN
HIYVSSDDIKETGYTYILPKNVLKKFICISDLRAQIAGYLYGVSPPDNPQVKEIRCIVMV
PQWGTHQTVHLPGQLPQHEYLKEMEPLGWIHTQPNESPQLSPQDVTTHAKVMADNPSWDG
EKTIIITCSFTPGSCTLTAYKLTPSGYEWGRQNTDKGNNPKGYLPSHYERVQMLLSDRFL
GFFMVPAQGSWNYNFMGVRHDPNMKYELQLANPKEFYHEVHRPSHFLNFALLQEGEVYSA
DREDLYA
NT seq
7224 nt
NT seq
+upstream
nt +downstream
nt
atgtttctcaaggccaggattgtgttaccacattcctaccatcacgtggatgccgtgtac
cctggggcacgtgtggtcgtgggccagggaagcctggtctgggagtcagacgtgattttc
ccacagtgctacagtgggataagcggcagctttgcggctcactgcggccagacgccgggg
gctgcccgaaagctgattggacatccctcctggctgcgtgccccgcccacatccgggtct
ctcagcgccccggtgcccagccccctggcgccgctgcccgactacatctctgaggagaag
ctgcaggagaaagccagcaagtggcagcagctgcaggccaagcgctatgcggagaagagg
aaattcggcttcgtggacgcgcagaaggaggacatgccccccgagcacgtccggaagatc
atccgcgaccacggcgatatgaccaacaggaagttccgtcacgacaagcgcgtctacctg
ggtgctctgaagtacatgcctcatgctgttctgaagctcttggagaacatgcccatgccc
tgggagcaaatcagagacgttccagtcttgtaccatatcacaggcgctatctcttttgtg
aatgagattccttgggtcatagagccggtctacattgctcagtgggggtcgatgtggatt
atgatgaggcgagagaagagggataggcgtcacttcaagaggatgagattccccccattt
gatgatgaagaaccccctctggattatgctgataacatcctggatgtggagcccctggaa
gcaattcagcttgagctggatccggaggaggatgcccctgtgctggactggttctatgac
catcagccgctgaaagacaacaagaagtatgtaaatggttcaacataccagcgttggcag
ttcactctcccgatgatgtccacgctgtaccggctggccaatcagctgctcactgacctt
gtggatgacaactatttctatttgtttgacctgaaagcgttctttacctccaaggcgctg
aacatggctattcctggaggtcctaagttcgagcctcttgttagagacatcaatcttcag
gatgaagactggaatgaatttaatgacatcaacaaaattatcatcaggcagccgatcagg
acagagtacaaaattgctttcccatacctgtacaataacctgccacaccatgtccacctg
acctggtatcatactccaaacgtcgttttcattaaaacagaagatcctgatctcccagct
ttttactttgatccactgatcaaccccatttcacacagacattctgtcaagagtcaggaa
ccgttgcctgatgatgatgaagagtttgagttgccagaatttgtggaacctttcctgaag
gataccccactctacacagataacacagccaatggcattgccctgctgtgggccccacgg
cccttcaacttgaggtctgggaggactcggagagctcttgacatcccactggtcaagaac
tggtatcgtgagcactgcccagcaggccagccagtgaaagtgcgagtctcctatcagaag
ctactgaaatactatgttctgaatgcgctcaagcacagacctcccaaggcccagaagaag
aggtacctgttccgctctttcaaggctacaaagtttttccagtcgacgaagctggactgg
gtggaagtaggcctgcaggtgtgtcgccagggctacaatatgctgaacttgctgatccac
agaaagaacctgaactaccttcacttggattacaacttcaacctgaagcctgtgaagacc
ctcaccactaaggaaaggaagaaatctcgttttggtaatgctttccatctgtgccgagag
gttctgcggctgactaagttggtggtggacagccacgtccaatacagacttggaaatgtg
gatgcgtttcagttggcagatggcttgcagtacatctttgcccacgtgggtcagctgaca
ggaatgtaccgatacaagtacaaactgatgaggcagattcgtatgtgcaaggacctgaaa
catctcatctactacaggtttaacacagggcctgtgggcaaaggtcctggctgtggcttc
tgggctccaggctggagagtatggctgttcttcatgaggggcatcacaccactgctggaa
cgctggctggggaatctgctagccaggcagtttgaagggcgtcactcaaagggtgtagca
aagactgtcacgaagcagcgtgtggagtctcactttgacctggagctgagggcagccgtt
atgcatgacattctggacatgatgccagaaggaatcaaacagaacaaagccagaaccatc
ctgcagcatctgagtgaggcctggcggtgctggaaggccaatatcccctggaaggtgcca
gggctgccaactcctattgaaaacatgatcctgaggtacgtgaaggcaaaagctgactgg
tggacaaatacagctcactacaacagggaacggatccgtcggggtgccactgtagacaaa
acagtctgtaagaagaatctgggccggctgaccagactttacttaaaagctgagcaggaa
cggcagcataattacttgaaggatgggccttacatcactgcggaagaggctgttgctgtg
tacaccaccacagtgcactggctggaaagcaggaggttctcacccattcccttcccccca
ctgtcctacaagcatgacaccaagttgctcatattagccctggagaggctgaaggaagct
tacagtgtgaaatctcgcctcaatcagtcgcagagagaagagttaggcttgatcgaacag
gcttatgataatcctcatgaagctctgtccagaatcaaacgacaccttttaactcagaga
gccttcaaggaggtgggtattgagttcatggatctctacagccacttagttcctgtttat
gatgttgagcccttggagaaaatcacagatgcttatctggatcagtacttgtggtatgaa
gctgataagcgacgactcttccctccgtggatcaaacctgctgacactgaacctcctccg
ctgttggtgtacaagtggtgccaaggcattaataatctgcaagatgtttgggaaacgagt
gaaggtgaatgcaacgtgatgctggaatctcgatttgagaagatgtatgagaagattgac
ctgacgttgctcaacaggctgttgcgtcttattgttgatcacaacattgctgactacatg
acagccaagaacaatgtggtgatcaactacaaggatatgaatcacacaaactcctatggg
attattcgtgggctgcagtttgcctccttcattgtccagtattatgggcttgtgatggac
ctgctggtgctggggggtctgcccccagccagtgaaatggctgggcctcctcagatgcca
aatgacttcctcagcttccaagacattgccactgaggtggcccatcccattcgcctcttc
tgcagatacatcgaccgtattcacatcttcttcaggtttacagcagatgaggcaagagac
ttgattcagcggtacctgacagagcatccggatcccaacaacgaaaacattgtaggctac
aacaacaagaagtgctggccccgggatgctcggatgcgcctcatgaaacatgatgtgaac
cttggtcgtgctgtattctgggatatcaagaatcgcttgcctcgatcagtcaccacggtg
cagtgggagaatagcttcgtatctgtctacagcaaagataaccccaatttactgtttaac
atgtgtgggtttgagtgccgcatcttgcccaagtgccgcaccagctatgaggagttcacc
cacaaggatggtgtctggaatttgcagaatgaggttaccaaggagcgcacagctcagtgc
tttctgcgtgtggatgatgagtctatgcagagatttcacaacagagtgaggcagatcctc
atggcatctggctccacaaccttcactaagatcgtcaataaatggaatacagctctgatt
ggcttgatgacgtatttccgggaagctgttgtaaacactcaggagttgcttgatttgctg
gtgaagtgtgaaaataaaatccagactcgaatcaaaattggtctgaattccaaaatgccc
agccgttttccgccggtggtgttttacacccctaaagagctgggagggctgggcatgctc
tccatgggccacgttctcatcccgcagtctgacctgaggtggtccaagcagacagatgtt
ggcatcactcacttccgctcaggaatgagtcatgaggaggaccagctcatcccaaatttg
tatcgttacatccagccatgggaaagtgaattcattgactctcagagagtgtgggcagag
tacgctcttaagcggcaggaggcaatagcccagaacaggcgtctgacgctagaggatctg
gaggactcatgggacaggggaattcctcgtattaacacccttttccagaaggaccggcat
accctagcttatgataaaggatggagagtcagaactgacttcaaacaatatcaggtcctg
aaacagaacccattctggtggacacatcagcgccatgatggcaaactctggaacctgaac
aactaccgcacagatatgatccaggcacttggtggagtggaaggaatcctggagcacact
ctcttcaagggcacttacttccccacgtgggagggtctcttctgggagaaggccagtggc
tttgaggagtccatgaagtggaagaagctgacaaatgcccagagatcgggtttgaaccaa
attccaaacagaagattcaccctgtggtggtctcctaccattaacagagccaacgtatat
gttgggtttcaggtgcagctggatttgacaggcatctttatgcacggcaagatccccacg
ctgaagatttctctcattcagattttccgagctcacttgtggcaaaagatccatgagagc
attgtaatggatttgtgtcaggtgtttgatcaagagctggatgctctggagattgagaca
gtgcagaaagagacgatccatcccaggaaatcatacaagatgaattcctcgtgtgcagat
atccttctttttgcttcctataagtggaatgtgtcacgtccatcattgctcgcagattcc
aaagatgtgatggacagcaccaccactcagaagtactggatagatatccagctgcgctgg
ggagattacgattcccatgatattgagcgctatgcaagagccaagttcctggactacact
acagacaacatgagtatctatccatctcctactggtgtgctcattgccattgatctggcc
tataacttgcacagtgcttatgggaactggttccctgggagcaaacctctgatccagcag
gctatggccaaaatcatgaaagcaaatcctgcgctgtatgtgttgagagaacgaatccgc
aagggcttgcagctgtactcgtctgagcccacagaaccatacctttcctcccagaactat
ggagagctcttctccaaccagatcatctggtttgtggatgacaccaatgtgtacagagtg
accattcacaagacttttgaagggaatttgaccacaaagcccatcaatggagccattttc
atcttcaatcccagaactggacagctcttcctgaagatcatccatacatctgtgtgggca
ggacagaagcgtctaggacagctggccaagtggaagactgctgaagaagtggctgccttg
attcgatcacttcctgtggaggagcagcccaagcagatcattgtgactcggaagggcatg
ttggacccacttgaggtgcacttgctggatttccccaatattgtgatcaaaggctcagag
ttgcagctgcccttccaggcctgtctgaaagtggaaaagtttggtgatctcatcctgaag
gctaccgaaccccagatggttctcttcaatctctatgatgactggctgaaaaccatctct
tcctacacggcattctcgcgtctgattctgatcctccgggcactacacgtgaataacgat
cgagccaaagttattctgaaaccagataagacaaccataacggagcctcaccacatctgg
ccaaccctgacagatgaggagtggatcaaggtggaggtgcagctgaaggatctcatcctt
gctgactatggcaagaagaacaatgtgaacgttgcatccctgacgcagtccgagatccga
gacattatcctgggcatggagatctctgccccctctcagcagagacagcagattgcagaa
attgagaagcaaaccaaggagcagtcgcaactgacagccacgcagacccgcactgttaac
aaacacggggatgaaatcatcacctctacaaccagcaactatgaaacccagactttctcc
tccaagactgagtggcgagtcagagcaatttctgctgccaacctccacctgcgaacaaac
cacatttacgtttcatcagacgatataaaggaaacaggctatacgtacattcttcccaag
aacgtgttgaagaaattcatctgcatctcagatctgcgggcccagattgcaggttacctc
tacggagtgagccctcccgataacccccaagtgaaggagatccggtgcattgtaatggtg
ccccagtggggaacgcaccagaccgtgcatctcccagggcagctgccacagcatgagtat
ctcaaggaaatggagcccctggggtggattcacacccaaccaaacgagtcccctcagctc
tcgccgcaggatgtcaccacccatgccaaggtcatggctgacaacccctcctgggatggg
gagaaaaccatcatcatcacctgcagttttactccaggctcctgcacgctgacagcctac
aaactgaccccgagcggctacgagtggggcaggcagaacacggacaaagggaacaacccc
aagggctacctgccatcccattatgagagggtgcagatgctgctgtccgatcgcttcctc
ggcttcttcatggtcccagcgcaaggctcctggaactacaacttcatgggcgttcgccac
gaccccaacatgaagtacgagctgcagctcgccaaccccaaggaattttaccacgaggtc
catcgcccttctcacttcctcaacttcgccctgctgcaggagggggaggtctactccgcc
gaccgcgaggatctctacgcctag
DBGET
integrated database retrieval system
