Egretta garzetta (little egret): 104131896
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Entry
104131896 CDS
T05152
Symbol
NUP88
Name
(RefSeq) nuclear pore complex protein Nup88 isoform X1
KO
K14318
nuclear pore complex protein Nup88
Organism
egz
Egretta garzetta (little egret)
Pathway
egz03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
egz00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104131896 (NUP88)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
egz03019
]
104131896 (NUP88)
Messenger RNA biogenesis [BR:
egz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
104131896 (NUP88)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup88
STX6_10_61_N
Citrate_synt
Motif
Other DBs
NCBI-GeneID:
104131896
NCBI-ProteinID:
XP_009643407
LinkDB
All DBs
Position
Unknown
AA seq
610 aa
AA seq
DB search
MVLELPKRWGKNSEFEGGKSTVNCSTVPIAERFFTSSTSLTLKHAAWYPCETLEPHIVLL
TSDNTIRFYSLKVPQTPIKVIALSDAEEETFTIKKGRAYTASLGETAVAFDFGPLVPVPK
NILGQRGSEEVLAYPLYILYENGETFLTYISLLQSTGNLGKLLGPLPMHPAAEDNYGYDA
CAVLCLPCVPNILVIATESGMLYHCVVLDGEEDDEQSEKSWDPRSDLIPSLYVFECVELE
LALKLASGDEEEPLESDFSCPIKLHRDPKCPSRYHCTHEAGVHSVGLTWINKLHKFLGSD
EEDKDSLQELGAEQKCFVEHILCTKPLPCRQPAPIRGFWIVSDILGPTMICITNTYECIT
RPLLSTVHPASPPLLCTREDKDVAVSPLRILAESQHSFEKHIRSILQRSSANPLLLKSAD
KDAAPPPEECLQLLSRATQVFREEYILKQDLAKEEIQQRVKLLWGQKKKQLEDLNYCREE
RKSLREMAERLADKYEEAKEKQEDIMNRMKKVLRSFHSQLPVLSDSEKDMKKELQTIHDQ
LQHLSNAIRQVKMKKEYQQKKMEKSTSPRKPSITLSAYQSKCIQTVLKEEGEHIREMVKQ
INDIRSHVNF
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atggtgctggagctgcccaaacgctgggggaagaattcagagtttgaaggtgggaaatcc
acggtgaactgtagcactgttccgattgcggaaaggttcttcacaagctcaacatctctg
actttaaagcacgctgcctggtatccctgtgagacattagagccccatattgtgctcttg
acttcagataacactataaggttttacagtctgaaggtacctcagacacccatcaaagtg
attgctctttcggacgctgaggaggagacatttacaatcaaaaaagggagagcctatact
gcatcactgggagagaccgcagtggcatttgactttggtccgttggtgccggtcccaaag
aacattcttggacagcgagggagtgaagaagtgttggcctacccgctttacattttatat
gaaaatggagagacgttcctcacgtacatcagcctgctacagagcactggaaatcttggt
aagctgcttggccctctgcccatgcaccctgctgcagaagataactatggctacgatgcc
tgtgctgtcctttgcctgccgtgtgttccaaacatcctggtgattgccaccgagtcagga
atgctttatcactgtgtggtactggatggagaagaggatgatgagcagtcagaaaagtct
tgggacccaagatctgatcttattccttccctgtatgtgtttgaatgtgttgagctggag
cttgcactgaaactggcatcaggagatgaagaagagcctttggagtccgatttctcttgc
ccaatcaaattgcatcgagatccgaaatgtccttctcgataccactgcacacacgaagct
ggtgtccatagcgtggggttgacgtggatcaataaactgcacaaattccttggttcagat
gaagaggacaaagacagtttacaagagctgggagcagaacagaagtgctttgtggaacat
attctgtgtacaaaaccattgccatgcaggcaacctgctccgattagaggattttggatc
gtttctgacatcctggggcccacaatgatttgcatcacaaacacctatgagtgtattaca
aggcctctcttaagtacagtccatcctgcatcccctcccctgctgtgcaccagagaagac
aaagatgttgctgtttcccctctccgtatcctggctgagtcacagcattcgtttgagaag
catatccgaagcatcctgcagcgcagttctgccaatcccttgcttctgaagtctgctgat
aaagatgctgctcctccccctgaagaatgccttcagctccttagcagagccacacaagtg
ttcagagaggaatatatactgaaacaagatctggcaaaagaggaaattcagcaaagagtg
aagctgctgtggggacagaaaaagaaacaactggaagatcttaattactgtcgagaggaa
aggaaaagtttgcgggaaatggcggagcgcttggctgacaagtacgaggaagccaaagag
aagcaggaagatatcatgaacaggatgaagaaagtacttcggagtttccactcccagctt
cctgttctatcagacagtgaaaaggatatgaagaaggaattgcagacaatacacgaccag
ctgcagcacttgagcaatgctatcagacaggttaaaatgaaaaaggaataccagcagaag
aagatggaaaagagcaccagcccccgaaaacccagcatcaccctcagtgcctaccagagc
aagtgcatccaaactgtcctgaaagaagagggagaacacataagggaaatggtaaaacag
attaatgacatcagaagccatgtgaacttctag
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