Egretta garzetta (little egret): 104132468
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Entry
104132468 CDS
T05152
Symbol
COL4A1
Name
(RefSeq) collagen alpha-1(IV) chain
KO
K06237
collagen type IV alpha
Organism
egz
Egretta garzetta (little egret)
Pathway
egz04382
Cornified envelope formation
egz04510
Focal adhesion
egz04512
ECM-receptor interaction
egz04518
Integrin signaling
egz04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
egz00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
104132468 (COL4A1)
04518 Integrin signaling
104132468 (COL4A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
104132468 (COL4A1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
104132468 (COL4A1)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
104132468 (COL4A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
egz04147
]
104132468 (COL4A1)
00536 Glycosaminoglycan binding proteins [BR:
egz00536
]
104132468 (COL4A1)
Exosome [BR:
egz04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
104132468 (COL4A1)
Glycosaminoglycan binding proteins [BR:
egz00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
104132468 (COL4A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
104132468
NCBI-ProteinID:
XP_035757046
LinkDB
All DBs
Position
Unknown
AA seq
1669 aa
AA seq
DB search
MRKWLGYGLLVISELSSLSSVGCSGCGKCDCSGVKGQKGERGLPGLQGVIGFPGMQGPEG
PPGPPGLKGDTGEPGLPGTKGTRGPPGASGFPGNPGLPAIPGRDGPPGPPGIPGCNGTKG
ERGPVGPPGLPGLTGSIGPPGPPGMKGDPGEVIGLLPPSVLKGDKGFPGQPGLPGPPGTP
GFQGPMGPQGPPGEPGPPGPPGLPGEKGYMGLGFQGPKGEKGEQGVSGPPGPPGPSPHMK
EKGTEVIKGEKGDPGEKGQQGAQGFPGSGFKGEKGEPGKPGPRGKPGKDGDPGPKGDPGL
PGGFGIPGRPGEPGAKGDKGERGFPGPPGRVIDPGPPDAFGEKGEPGVSGLPGLKGQKGE
KGFPGIQGIPGPPGRPLPDRVGSPGVPGERGEKGEKGSPGFSLPGPPGRDGFPGPPGLPG
PPGPPGKTDGIDQCQQGEPGAPGSPGPPGRDGFPGEMGEKGDKGESCALCDKVGPPGLPG
PQGPPGPAGFPGQSGFKGERGLPGLDGLPGVPGPPGTPGLMGSPGAKGEPGDFSYDSILK
GEKGDPGFPGQPGIPGREGRPGKDGLPGPQGPKGASGTAGLKGERGPPGQPGFPGVRGER
GFPGPPGIGVAGLPGDKGDRGFAGTPGLPGLPGAKGEAGRTVPLPGPPGADGLPGPPGFP
GPQGDKGNPGLPGRPGLPGEKGAVGQPGIGFPGPPGPKGFQGQPGSPGLPGTPGTPGLDG
LPGVPGLQGQKGEPGVGLPGPKGLPGPPGPPGIPGEKGNPGLPGLRGEQGFPGIPGQQGF
RGDPGLPGLQGMQGPPGAPGLGPQGSPGPAGQPGPQGPPGFPGIKGERGFPGIPGLDMPG
PKGDKGSQGQPGVPGSVGLPGLPGPQGAIGLKGSAGAKGEMGVMGTPGLPGTPGPVGDRG
LPGEKGSQGFKGVVGPQGDPGVKGDKGEAGLPGKPGTMDNMDMVSLKGQKGDQGEKGDHG
ATGEKGLRGEYGEPGIPGKDGEPGTPGHPGPKGDQGPPGYPGDPGTPGQKGSVGEMGLPG
TPGEKGLPGVPGSPGIPGFPGQKGEKGDKGAPGFPGVGFPGSPGEKGEPGRTGSPGLSGD
KGEKGSAGIPGMPGVPGPKGSPGMAGFPGNPGRHGEKGEKGLPGLSGIPGLKGEPGEPGV
PGPAGSIGQKGEPGYDGIPGAAGAKGEQGIPGRGLPGFPGAKGDKGAKGDVGFPGSPGSP
GIPGLKGEPGYDGPPGPKGSQGLPGLPGSAIEGPKGDRGPQGQPGLPGLPGPTGPPGPPG
LKGAKGEQGSNGWPGTPGGPGVKGDPGFQGLPGSPGLPGDIGQKGDLGPPGVPGIPGPKG
SPGFPGLKGERGDQGLPGSKGLQGPPGPPGAFQLVKGDPGLPGPVGPVGLKGFPGLPGPK
GQQGVTGPSGVPGPPGSPGFDGKPGQKGEVGPYGPPGPRGFPGPPGPEGLPGAMGPPGAP
SVAHGFLVTRHSQTTEEPSCPFGTRLIYHGYSLLYVQGNERAHGQDLGTAGSCLRKFSTM
PFLFCNINNVCNFASRNDYSYWLSTPEPMPMSMAPITGDNIRPFISRCSVCEAPAMVIAV
HSQTIQIPPCPEGWSSLWIGYSFVMHTSAGAEGSGQALASPGSCLEEFRSAPFIECHGRG
TCNYYANAYSFWLATIERNEMFKKPTPSTLKAGDLRSNVSRCQVCMRKT
NT seq
5010 nt
NT seq
+upstream
nt +downstream
nt
atgagaaagtggttaggttacggtctacttgtgattagtgagctatcctctctatctagt
gttggttgttccggttgtggaaaatgtgactgcagtggagtaaaagggcaaaagggagaa
agaggcttgcctggactacagggtgtgattgggtttcctggaatgcaaggacctgaaggt
cctcctgggccaccggggcttaagggtgatactggagaaccaggactgccaggaacaaag
ggaacaagaggccccccaggagcatcaggctttccgggaaacccaggccttcctgccatt
cctggacgagatggccctcctggtccacctggcattccaggatgtaatggcacaaagggc
gaaagaggtccagtaggtcccccggggttaccaggactgactgggagcataggaccccca
ggacctcctggaatgaagggagatccaggtgaagtgattggtcttttacctcctagtgtg
ctaaaaggtgataaaggctttcctgggcaacctggactacctggtccacctggaactcca
gggtttcaaggaccaatggggccacaagggcctccaggagagccaggtcccccagggcca
ccaggactcccaggcgagaagggctacatgggcttgggctttcagggtcccaaaggtgaa
aagggagaacaaggggtaagcggcccaccaggcccaccaggaccatcaccacatatgaaa
gaaaaagggactgaagtcataaagggagaaaagggcgatccaggtgaaaagggccaacag
ggagcacaaggatttccaggttcaggtttcaaaggagaaaagggtgaacctgggaagcct
ggtccacgtggaaagcctggaaaagatggtgacccaggaccaaaaggagaccccggtttg
cctggtgggtttgggattccaggacgacctggggagcctggtgcgaagggtgacaaaggt
gaacgaggttttccaggacctccaggaagagttatagatcctggaccaccagatgccttt
ggtgaaaaaggagagcctggagtttcaggtttgcctggactgaaaggtcaaaaaggtgaa
aaaggtttccctggtatacaaggaatcccaggacctccaggtcgaccacttccagacagg
gtaggatcacctggtgtccctggagagagaggtgaaaaaggtgaaaagggttctccaggg
ttctctttacccggaccccctggaagagatggtttcccaggtcctccggggttgcctggc
ccaccaggtcctccaggaaaaacagatggaatcgatcaatgccaacagggagaacctggt
gcaccaggtagtcctggacctccaggaagagatggatttccaggagagatgggagagaaa
ggtgacaaaggtgaatcctgtgccttatgtgataaagtaggacctcctggacttccagga
ccacaagggccaccaggtccagcaggttttccaggacaatcaggtttcaagggtgaaaga
ggcttacctggacttgatggccttccaggggtacctgggccccccggcactccaggactt
atgggcagccctggggcaaaaggagaaccaggagatttttcttatgattctatcctgaaa
ggtgaaaagggagatcctggtttcccaggacaaccaggtattcctggaagagaaggaaga
ccaggaaaagatggattgccaggtccccagggtccgaaaggagcatcgggtacagctggc
ttgaaaggagaacgtggtccccctggccaacctggattccctggagtacgtggtgaaaga
ggttttcctggccctcctgggataggcgttgcagggctacctggtgacaaaggagacaga
ggctttgctggaaccccaggtttaccaggccttccaggggcaaagggcgaagcaggacga
actgtaccgctccctggacctcctggagcagatggccttcctgggccacctggtttccct
ggaccccaaggtgacaaagggaatcctgggcttccaggtagacccggcctgccgggagaa
aaaggtgctgttgggcagccaggtatagggttccctggacctccaggacccaaaggtttc
caaggtcagcctggctcacctggtctgccggggactccgggaacccctggcctggatggt
ttgccaggcgtaccaggtttacaaggtcaaaaaggtgaacctggtgtaggtctccctggc
cctaagggattgccaggccccccaggcccacctggcatccctggagaaaagggaaatcca
ggactgcctggcttacgtggcgagcaaggctttcccggcatacctggacagcaaggattc
agaggcgaccctggcctcccaggactgcagggcatgcagggccctccgggcgcgccaggg
ctgggcccccagggatcgccaggacccgctgggcagccgggaccccagggaccaccagga
tttcctggaataaaaggagaaaggggattccctggtatcccaggtctagatatgccagga
ccaaagggggataaaggtagccagggccagcctggagtaccagggtctgtggggttacct
ggcctgccgggtccacagggggccattggactgaaaggatctgcaggagccaaaggagaa
atgggagttatgggaactcctgggttgccaggaactcctggaccagttggagatcgaggg
ttgcccggtgaaaaaggtagccaaggtttcaaaggtgtagttggaccacagggtgatcct
ggtgtcaaaggagataaaggtgaagccggtctcccaggaaaacctggaacaatggacaac
atggacatggttagtctcaaaggccaaaagggagatcaaggagaaaaaggggaccatgga
gcaacaggagaaaaagggttacgtggggaatatggagaaccaggaattccagggaaggac
ggtgaacctggtactccaggacatccaggaccaaaaggtgatcagggccccccagggtac
ccaggagatccaggaactccaggacaaaaaggatcggttggtgaaatgggtttgccagga
acacctggagaaaagggtcttccaggagtaccaggttcaccaggcataccagggttccct
gggcaaaaaggtgaaaaaggagacaaaggagcaccaggttttcctggagttggctttcca
ggttctcctggtgagaagggagaaccaggaagaactggtagtccaggtttatctggagat
aagggtgaaaagggtagtgcaggaattcctggaatgccgggtgtcccaggtcccaaagga
tcccctggcatggcaggatttccaggcaaccccggccgccatggagaaaagggtgaaaaa
ggacttcctggcttaagtggcattccaggtttaaaaggagaaccaggtgagcctggcgtt
ccgggtcctgctggttccattggacagaagggtgaaccaggttatgatgggattccaggt
gcagctggtgcaaagggtgaacaaggtattccaggtagaggacttccaggatttcccggt
gcaaagggagataaaggtgcgaaaggtgatgtgggttttccaggatccccaggaagtccg
gggatcccaggcctgaaaggagaaccaggatatgatggtccaccaggccctaagggtagc
caaggtcttcctggactaccaggaagtgcaatagagggccctaaaggagacagaggaccc
caaggccaacctggccttccaggtttaccaggtccaacagggccaccaggacccccaggt
ctgaaaggggctaaaggagagcaggggagcaatggctggcctgggactcctgggggtcca
ggagtcaaaggtgatccaggcttccagggactgccaggtagtcctggtttaccaggagat
attggtcaaaagggtgatctgggacctccaggagttccaggcatcccaggtccaaaaggt
tctcctggcttcccaggccttaagggtgagcgaggtgaccaaggtcttcctggatctaaa
ggtttacaaggcccaccaggcccaccaggtgcttttcagcttgttaaaggggaccctgga
ttacccggccctgtaggaccagttggtctcaaaggattcccgggacttccaggtcccaaa
ggacagcaaggagtgacaggaccttcaggtgtacctggaccacctggtagtccaggattt
gatggtaaacctgggcaaaaaggagaagttggtccttatggtcccccagggcccagagga
ttccctggtccacctggtcctgaaggtttgcctggggcgatgggcccaccaggtgcaccg
tctgttgctcatggcttccttgttaccagacacagtcaaaccacggaagaaccgtcatgt
ccttttggaacaagactgatttaccatggctactccttgctttatgtacaaggcaatgaa
agagcacatggccaagatctgggcacagcaggaagctgtcttcgtaaatttagtaccatg
cctttcttattctgcaatatcaacaacgtatgtaactttgcatcaaggaatgactattcc
tactggctgtccactcctgaacccatgccaatgagcatggctcctatcactggtgataat
atcagaccattcatcagcagatgctctgtgtgtgaggctcctgcaatggtgatagctgtt
cacagtcaaacaattcaaataccaccgtgtccagaaggctggagttcactttggattggt
tactcctttgtcatgcacaccagtgctggtgcggagggctctggccaggccctggcgtct
cctggttcctgcctagaggagtttcgcagcgctcccttcattgaatgccatggccggggc
acctgcaattattatgcaaatgcttacagcttctggcttgccactatagagaggaatgag
atgttcaagaaaccgactccctcaactttgaaagcaggggatctgcgctccaatgttagc
cgttgtcaagtctgtatgagaaaaacataa
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integrated database retrieval system
