Egretta garzetta (little egret): 104133137
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Entry
104133137 CDS
T05152
Symbol
COL4A6
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-6(IV) chain
KO
K06237
collagen type IV alpha
Organism
egz
Egretta garzetta (little egret)
Pathway
egz04510
Focal adhesion
egz04512
ECM-receptor interaction
egz04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
egz00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
104133137 (COL4A6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
104133137 (COL4A6)
09142 Cell motility
04820 Cytoskeleton in muscle cells
104133137 (COL4A6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
egz04147
]
104133137 (COL4A6)
00536 Glycosaminoglycan binding proteins [BR:
egz00536
]
104133137 (COL4A6)
Exosome [BR:
egz04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
104133137 (COL4A6)
Glycosaminoglycan binding proteins [BR:
egz00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
104133137 (COL4A6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
104133137
NCBI-ProteinID:
XP_009644807
LinkDB
All DBs
Position
Unknown
AA seq
1702 aa
AA seq
DB search
MSENDLNIEGCVEIIGLYDDSSAVLVKSELEAYVGGKKSYSGPCGGRDCSAGCKCFPEKG
ARGRPGPIGLQGPIGAPGFTGPEGLPGAKGERGAVGPPGPPGQKGDKGPMGVPGFQGING
IPGHPGQSGPRGPPGLDGCNGTTGSPGASGSDGFPGLPGLPGHPGPKGLKGEPVFAQGSL
KGMKGENGLPGLDGISGPKGFPGPIGSAGPIGLPGLQGPMGPPGPPGPKGNMGLGFQGEK
GEKGDVGLPGPPGPPPSTGILEFMGFPKGKQGEKGEPGPQGFPGDKGLPGVPGFGGVGEK
GEKGVPGLPGGRGILGLDGSDGIPGRKGHPGIPGYPGLDGVEGMKGELGDIGPPGPPIVI
DREGVVISGAQGDPGNPGIPGPPGDEGISGLPGLPGAPGFPGLERDGMGPGGSPGIPGLK
GEVGEPGRATIGLPGTPGRDGLPGLPGAPGLPGSPRPSFPPDTILNGRTGAPGEPGQRGL
PGALGPKGYKGEAGDCACDGGVTRAGLKGISGPPGPSGSPGVPGIKGIGGDPGTVGAPGL
RGPPALAGQQGLPGLKGEKGDSSYATGRGAPGDRGATAPRGPSGIPGTPGRDGLPGLPGP
PGPPGDGGLGFPGEKGLPGLPGSKGHRGETGSPGVGYPGPSGVRGPPGDPGMDGVPGQAG
LPGPSGITLPCIVPGAYGPPGTPGVPGLPGPKGSKGFPGIPGQPGLHGSKGQPGSPGIIG
LQGEPGFSGPRGDQGSQGLPGLDGTDGLPGKMGASGLAGTKGAPGDVFGAESGALGERGR
PGLPGDKGLTGDLGFPGPKGLDGRPGLLGIKGEQGNPGYSGVPGLRGPPGPGGPFGIKGK
PGPLGSVGLAGAPGCQGLPGVKGLTGDVGPQGPAGMKGFPGLDGAPGSPGERGFLGPPGP
FGQDGRPGFSGSKGEKGSSGLLGFPGMPGLPGVPGVNGFKGTPGTVGGKGSPGAVGLQGQ
KGDRGDVGPPGLPVLGPPEQALQFKGDKGDPGLAGLGGFPGPRGDKGIPGSRGQPGLPGP
IGSASKERGLHGDPGFPGPPGQPGLLGQKKKKXMPGERGSDGITGTLGFPGPIGLPGPKG
DQGESAXXXGIAGAKGERGDPGFPGERGREGPKGEPGYPGNTGVNGLKGGPGDLGQEGPA
GIPGNAGPRGIPGPPGPPGQPGSVGFPGARGTAGPKGFHGFPGLNGLNGLPGTKGSPGTP
GLSEAGLKGPAGLPGPKGEEGSPGLGRGGLGFPGPKGSSGDMGPPGPVGLPGLPGTPGVS
LPSDIRGRPGDAGHPGTDGSSGLPGPPGPRGPPGPASDQGDTGTPGVPGILGLRGIKGDV
GPTGPIGLPGASGFKGIRGEPGLMGMPGKDGPPGDPGHPGLKGETGHRGLPGLQGAPGIT
PQPEEITAPAGLPGLPGIDGVPGFDGDPGFQGSAGKPGAKGLPGRSGLKGRDGLPGAPGI
AGDPGPLGAPGPQGFEGVAGKPGSLGLPGMPGRSVGVGYTLVKHSQSDQIPPCPIGMNKL
WDGYSLLYVEGQEKAHNQDLGFAGSCLPRFSTMPFIYCNINEVCYYASRNDKSYWLSTTA
PIPMMPVDSVRIPQYISRCSVCEAPSQAVAVHSQDITIPQCPLGWRSLWIGYSFLMHTAA
GAEGGGQSLVSPGSCLEDFRATPFIECNGARGTCHYFANKYSFWLTTVEQSQQFVSAPPS
ETLKAGQLRTRVSRCQVCMKNL
NT seq
5109 nt
NT seq
+upstream
nt +downstream
nt
atgtctgagaatgacctgaatattgaaggttgtgtggaaattattggcctgtacgacgac
tcttcagctgtcctagtgaaatcagagttagaagcatatgtgggtggaaagaagtcttac
agtgggccgtgtgggggccgcgattgcagcgctggatgcaaatgttttccagagaagggt
gcacggggtcgaccaggaccgattgggcttcaaggaccaataggtgcgcctggatttact
ggcccagaaggtttgccgggagcaaaaggtgagagaggagcagtgggccctcctggacca
cctggacagaaaggtgacaagggcccgatgggagttccaggatttcaaggcatcaacggg
atcccaggtcaccctgggcaatctggacctagaggtccgcctggcctcgatggctgcaat
ggtaccactgggagtcctggcgcttctggatcagatgggtttcctggcctacctgggctg
cctggtcatcctggcccaaaaggccttaaaggagaacctgtttttgctcaaggcagtctt
aaaggaatgaagggagaaaatggtcttcctggattggatggaatttctggccccaaaggt
tttccaggtccaataggttctgcgggccctataggattaccaggtttgcagggtccaatg
ggtccccctgggccaccaggtccaaaaggtaacatgggattaggctttcaaggagagaaa
ggagaaaagggtgatgtagggctgcctggccctccaggtcccccaccatccactggaata
ctcgaattcatgggatttccaaaagggaagcaaggagaaaagggtgagccaggccctcaa
ggattccctggagacaaaggattgcctggtgtgccgggctttggaggtgttggagaaaaa
ggagaaaaaggtgtgcctggcttaccaggtggcaggggtattttgggactggatggatct
gatgggattccaggaagaaagggtcatccaggtattccaggctatccaggactggatgga
gtcgaaggcatgaagggtgaattaggtgacatcggtcccccaggccctcctattgttatt
gacagagaaggtgtagtcatttcaggtgcccagggtgaccctggaaacccaggaatacct
ggtcctccaggagatgaagggatcagtggtttaccaggccttccaggagctccagggttt
ccaggcctagagagagatggaatgggccctggagggtctccaggtattccaggtcttaaa
ggtgaagtgggagaaccgggaagagcaacgattggattaccgggcactcccggcagagat
ggtttaccgggtctgccaggagcaccaggattgcctggttcaccacgcccttcattcccc
ccagacacgatcctgaatgggaggactggggccccaggggagcctggacaaagagggctg
ccaggagccttgggtccaaaggggtacaaaggagaggcaggtgattgtgcttgtgatgga
ggagttacaagagctggtctaaaaggcatctcaggtccaccaggtccttcaggaagccct
ggtgtgcctgggattaagggcattggtggagacccaggcactgtgggtgcaccaggactg
cgaggccctccggctttggctggtcagcaaggtcttccaggccttaagggtgaaaaagga
gattcatcctatgcaacaggcagaggtgctcctggggaccgtggtgcaacagcacccaga
ggaccttcaggcattccgggaacccctggcagggatggacttccaggcttgccaggcccg
ccaggccctccaggtgatggtgggctaggtttcccaggtgaaaaaggactgccaggatta
cctggctccaagggccatcgtggagaaactggttctcctggtgttggatatccaggtcct
agtggagttcgtgggccgccaggtgacccaggaatggatggggttcccggacaagcaggt
cttccagggccttcaggtatcaccttgccctgcatagttcctggagcatatgggccccca
gggactcctggcgttccaggattgccaggtcccaaaggcagcaaaggctttcctggcatt
ccaggccaacctggattacacgggtcaaaaggacaaccagggtctccaggaataataggc
ttgcaaggggaacctggcttctctgggcctcgaggagaccaagggtcacaaggacttcca
gggctggatggaacagatggtttgcctgggaaaatgggtgcttcaggcttagctggaaca
aaaggagctcctggagatgtatttggtgctgagagtggagccttgggggagcgtggccga
cctggactcccaggtgataaagggcttacaggtgatcttggatttccgggaccaaaaggg
ttagacggaagaccaggcctcctaggtattaaaggcgaacagggtaatccgggatattcg
ggtgtccctggattgcggggacctcctggtcctggaggtccttttggcattaagggaaaa
ccaggacccttggggtcagttggccttgcaggagcaccaggctgtcaaggacttcctgga
gtcaaaggcttgactggggatgtaggtccacaaggccctgctggtatgaaaggcttccca
ggtcttgatggtgctccaggatctcctggagaaagaggattcttagggccacctgggcct
ttcggtcaagacggacgtccaggtttctctggatcaaaaggcgagaaagggtcttctggc
ctgcttggtttccctggcatgccaggcctgcctggtgtccctggagtaaatgggtttaaa
ggaactcctggcacagttggaggaaaagggagccctggagctgtgggactccaaggtcaa
aaaggtgacagaggtgatgtaggtccacctggtcttccagttcttgggcctccagaacag
gccctgcaattcaaaggagacaaaggagatcctggattagctggacttggaggattccct
ggacctagaggtgataaaggaatcccaggaagccgtggacagcctggtctccctggtcca
attgggtcagcaagcaaagagagaggtcttcatggtgacccaggcttccctggtccccct
ggacagcctgggctgctaggacagaagaaaaaaaaannaatgccaggagagaggggttca
gatggtatcacaggaacacttggattcccaggacctattggcctccctggtccaaagggt
gaccaaggagagtctgcnnnnnnnnctggtattgctggagcaaaaggagagcgaggggac
ccggggttcccaggagagagagggagagaaggacccaagggtgaaccaggctacccagga
aacactggggtgaatggactcaaaggcggcccaggagatcttggccaagaaggaccagca
ggaatccctggaaatgctgggccgagaggaatccctgggccaccaggacctccagggcag
ccaggatctgtcggattccctggagctcgtggaacagcaggacctaaagggtttcatgga
tttccgggtttaaatggtctgaatggcttgccgggcacaaaagggtctcctggaacacca
ggtctgagtgaagctggactgaaaggccccgcaggtctcccaggtccgaagggtgaagaa
ggttctccaggcttgggtagaggaggcctaggattccctggaccaaaaggctcatcagga
gacatgggtccccctggtcctgtgggactgcctggcttgccaggaacacctggagtttct
cttccttctgatatacgtgggagacctggggatgcaggccatccgggaactgatgggagt
tcaggtcttccaggccctccaggaccccgagggccccctggcccagcttctgaccaaggg
gacacaggcactccaggtgtccctggtattcttggcttgcgaggcattaagggtgacgtg
ggacccactggtccaattggactccctggagcatctggattcaaaggtataagaggggag
cctggccttatggggatgccaggtaaagatgggcctccaggggatcctggccaccctggg
ctgaaaggcgaaacgggccaccgagggctccctggcctacaaggggctccaggtataacc
ccacagccagaagaaatcacagcccctgcaggcttacctggtctgccaggaatcgatggt
gtccctggctttgatggagatcctgggttccagggctcggctggaaaaccaggtgcaaaa
ggtctaccaggaagatctggtttgaaaggacgtgatggtttacctggagcacctggcata
gctggggatccaggacctttaggtgccccaggaccacaaggttttgaaggtgttgctgga
aagccgggctcacttggtttgccgggaatgcctggtcggagcgtgggcgttggatacact
ttagtgaagcacagtcagtcagaccaaatcccaccttgccccataggaatgaataagctc
tgggatggctacagcttattgtacgtggaggggcaggaaaaggcacacaaccaggatctt
ggttttgctggctcatgtttgcctcgcttcagcaccatgccttttatttactgcaacatc
aacgaagtgtgctactatgccagccgaaatgacaagtcctactggctctccaccactgct
cccatccccatgatgccagtggacagtgttcggatcccacagtacatcagtcgttgctca
gtctgtgaagcaccttcccaggccgtggccgtgcacagccaggacatcaccatcccgcag
tgtccccttggctggcgcagcctatggataggatactccttcctcatgcatactgcggct
ggcgcagaaggtggaggtcagtcccttgtctcacctggctcttgcttggaggatttccgt
gctactcccttcattgaatgcaacggtgccagaggaacgtgccattactttgcgaacaaa
tacagcttctggctgacgacggttgagcagtcgcagcagtttgtcagtgctcctccctca
gaaactctgaaagcaggacagcttcgaacaagggtcagccgttgccaagtgtgcatgaag
aacttgtag
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integrated database retrieval system
