Egretta garzetta (little egret): 104133137
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Entry
104133137 CDS
T05152
Symbol
COL4A6
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-6(IV) chain
KO
K06237
collagen type IV alpha
Organism
egz
Egretta garzetta (little egret)
Pathway
egz04382
Cornified envelope formation
egz04510
Focal adhesion
egz04512
ECM-receptor interaction
egz04518
Integrin signaling
egz04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
egz00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
104133137 (COL4A6)
04518 Integrin signaling
104133137 (COL4A6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
104133137 (COL4A6)
09142 Cell motility
04820 Cytoskeleton in muscle cells
104133137 (COL4A6)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
104133137 (COL4A6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
egz04147
]
104133137 (COL4A6)
00536 Glycosaminoglycan binding proteins [BR:
egz00536
]
104133137 (COL4A6)
Exosome [BR:
egz04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
104133137 (COL4A6)
Glycosaminoglycan binding proteins [BR:
egz00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
104133137 (COL4A6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
104133137
NCBI-ProteinID:
XP_009644807
LinkDB
All DBs
Position
Unknown
AA seq
1702 aa
AA seq
DB search
MSENDLNIEGCVEIIGLYDDSSAVLVKSELEAYVGGKKSYSGPCGGRDCSAGCKCFPEKG
ARGRPGPIGLQGPIGAPGFTGPEGLPGAKGERGAVGPPGPPGQKGDKGPMGVPGFQGING
IPGHPGQSGPRGPPGLDGCNGTTGSPGASGSDGFPGLPGLPGHPGPKGLKGEPVFAQGSL
KGMKGENGLPGLDGISGPKGFPGPIGSAGPIGLPGLQGPMGPPGPPGPKGNMGLGFQGEK
GEKGDVGLPGPPGPPPSTGILEFMGFPKGKQGEKGEPGPQGFPGDKGLPGVPGFGGVGEK
GEKGVPGLPGGRGILGLDGSDGIPGRKGHPGIPGYPGLDGVEGMKGELGDIGPPGPPIVI
DREGVVISGAQGDPGNPGIPGPPGDEGISGLPGLPGAPGFPGLERDGMGPGGSPGIPGLK
GEVGEPGRATIGLPGTPGRDGLPGLPGAPGLPGSPRPSFPPDTILNGRTGAPGEPGQRGL
PGALGPKGYKGEAGDCACDGGVTRAGLKGISGPPGPSGSPGVPGIKGIGGDPGTVGAPGL
RGPPALAGQQGLPGLKGEKGDSSYATGRGAPGDRGATAPRGPSGIPGTPGRDGLPGLPGP
PGPPGDGGLGFPGEKGLPGLPGSKGHRGETGSPGVGYPGPSGVRGPPGDPGMDGVPGQAG
LPGPSGITLPCIVPGAYGPPGTPGVPGLPGPKGSKGFPGIPGQPGLHGSKGQPGSPGIIG
LQGEPGFSGPRGDQGSQGLPGLDGTDGLPGKMGASGLAGTKGAPGDVFGAESGALGERGR
PGLPGDKGLTGDLGFPGPKGLDGRPGLLGIKGEQGNPGYSGVPGLRGPPGPGGPFGIKGK
PGPLGSVGLAGAPGCQGLPGVKGLTGDVGPQGPAGMKGFPGLDGAPGSPGERGFLGPPGP
FGQDGRPGFSGSKGEKGSSGLLGFPGMPGLPGVPGVNGFKGTPGTVGGKGSPGAVGLQGQ
KGDRGDVGPPGLPVLGPPEQALQFKGDKGDPGLAGLGGFPGPRGDKGIPGSRGQPGLPGP
IGSASKERGLHGDPGFPGPPGQPGLLGQKKKKXMPGERGSDGITGTLGFPGPIGLPGPKG
DQGESAXXXGIAGAKGERGDPGFPGERGREGPKGEPGYPGNTGVNGLKGGPGDLGQEGPA
GIPGNAGPRGIPGPPGPPGQPGSVGFPGARGTAGPKGFHGFPGLNGLNGLPGTKGSPGTP
GLSEAGLKGPAGLPGPKGEEGSPGLGRGGLGFPGPKGSSGDMGPPGPVGLPGLPGTPGVS
LPSDIRGRPGDAGHPGTDGSSGLPGPPGPRGPPGPASDQGDTGTPGVPGILGLRGIKGDV
GPTGPIGLPGASGFKGIRGEPGLMGMPGKDGPPGDPGHPGLKGETGHRGLPGLQGAPGIT
PQPEEITAPAGLPGLPGIDGVPGFDGDPGFQGSAGKPGAKGLPGRSGLKGRDGLPGAPGI
AGDPGPLGAPGPQGFEGVAGKPGSLGLPGMPGRSVGVGYTLVKHSQSDQIPPCPIGMNKL
WDGYSLLYVEGQEKAHNQDLGFAGSCLPRFSTMPFIYCNINEVCYYASRNDKSYWLSTTA
PIPMMPVDSVRIPQYISRCSVCEAPSQAVAVHSQDITIPQCPLGWRSLWIGYSFLMHTAA
GAEGGGQSLVSPGSCLEDFRATPFIECNGARGTCHYFANKYSFWLTTVEQSQQFVSAPPS
ETLKAGQLRTRVSRCQVCMKNL
NT seq
5109 nt
NT seq
+upstream
nt +downstream
nt
atgtctgagaatgacctgaatattgaaggttgtgtggaaattattggcctgtacgacgac
tcttcagctgtcctagtgaaatcagagttagaagcatatgtgggtggaaagaagtcttac
agtgggccgtgtgggggccgcgattgcagcgctggatgcaaatgttttccagagaagggt
gcacggggtcgaccaggaccgattgggcttcaaggaccaataggtgcgcctggatttact
ggcccagaaggtttgccgggagcaaaaggtgagagaggagcagtgggccctcctggacca
cctggacagaaaggtgacaagggcccgatgggagttccaggatttcaaggcatcaacggg
atcccaggtcaccctgggcaatctggacctagaggtccgcctggcctcgatggctgcaat
ggtaccactgggagtcctggcgcttctggatcagatgggtttcctggcctacctgggctg
cctggtcatcctggcccaaaaggccttaaaggagaacctgtttttgctcaaggcagtctt
aaaggaatgaagggagaaaatggtcttcctggattggatggaatttctggccccaaaggt
tttccaggtccaataggttctgcgggccctataggattaccaggtttgcagggtccaatg
ggtccccctgggccaccaggtccaaaaggtaacatgggattaggctttcaaggagagaaa
ggagaaaagggtgatgtagggctgcctggccctccaggtcccccaccatccactggaata
ctcgaattcatgggatttccaaaagggaagcaaggagaaaagggtgagccaggccctcaa
ggattccctggagacaaaggattgcctggtgtgccgggctttggaggtgttggagaaaaa
ggagaaaaaggtgtgcctggcttaccaggtggcaggggtattttgggactggatggatct
gatgggattccaggaagaaagggtcatccaggtattccaggctatccaggactggatgga
gtcgaaggcatgaagggtgaattaggtgacatcggtcccccaggccctcctattgttatt
gacagagaaggtgtagtcatttcaggtgcccagggtgaccctggaaacccaggaatacct
ggtcctccaggagatgaagggatcagtggtttaccaggccttccaggagctccagggttt
ccaggcctagagagagatggaatgggccctggagggtctccaggtattccaggtcttaaa
ggtgaagtgggagaaccgggaagagcaacgattggattaccgggcactcccggcagagat
ggtttaccgggtctgccaggagcaccaggattgcctggttcaccacgcccttcattcccc
ccagacacgatcctgaatgggaggactggggccccaggggagcctggacaaagagggctg
ccaggagccttgggtccaaaggggtacaaaggagaggcaggtgattgtgcttgtgatgga
ggagttacaagagctggtctaaaaggcatctcaggtccaccaggtccttcaggaagccct
ggtgtgcctgggattaagggcattggtggagacccaggcactgtgggtgcaccaggactg
cgaggccctccggctttggctggtcagcaaggtcttccaggccttaagggtgaaaaagga
gattcatcctatgcaacaggcagaggtgctcctggggaccgtggtgcaacagcacccaga
ggaccttcaggcattccgggaacccctggcagggatggacttccaggcttgccaggcccg
ccaggccctccaggtgatggtgggctaggtttcccaggtgaaaaaggactgccaggatta
cctggctccaagggccatcgtggagaaactggttctcctggtgttggatatccaggtcct
agtggagttcgtgggccgccaggtgacccaggaatggatggggttcccggacaagcaggt
cttccagggccttcaggtatcaccttgccctgcatagttcctggagcatatgggccccca
gggactcctggcgttccaggattgccaggtcccaaaggcagcaaaggctttcctggcatt
ccaggccaacctggattacacgggtcaaaaggacaaccagggtctccaggaataataggc
ttgcaaggggaacctggcttctctgggcctcgaggagaccaagggtcacaaggacttcca
gggctggatggaacagatggtttgcctgggaaaatgggtgcttcaggcttagctggaaca
aaaggagctcctggagatgtatttggtgctgagagtggagccttgggggagcgtggccga
cctggactcccaggtgataaagggcttacaggtgatcttggatttccgggaccaaaaggg
ttagacggaagaccaggcctcctaggtattaaaggcgaacagggtaatccgggatattcg
ggtgtccctggattgcggggacctcctggtcctggaggtccttttggcattaagggaaaa
ccaggacccttggggtcagttggccttgcaggagcaccaggctgtcaaggacttcctgga
gtcaaaggcttgactggggatgtaggtccacaaggccctgctggtatgaaaggcttccca
ggtcttgatggtgctccaggatctcctggagaaagaggattcttagggccacctgggcct
ttcggtcaagacggacgtccaggtttctctggatcaaaaggcgagaaagggtcttctggc
ctgcttggtttccctggcatgccaggcctgcctggtgtccctggagtaaatgggtttaaa
ggaactcctggcacagttggaggaaaagggagccctggagctgtgggactccaaggtcaa
aaaggtgacagaggtgatgtaggtccacctggtcttccagttcttgggcctccagaacag
gccctgcaattcaaaggagacaaaggagatcctggattagctggacttggaggattccct
ggacctagaggtgataaaggaatcccaggaagccgtggacagcctggtctccctggtcca
attgggtcagcaagcaaagagagaggtcttcatggtgacccaggcttccctggtccccct
ggacagcctgggctgctaggacagaagaaaaaaaaannaatgccaggagagaggggttca
gatggtatcacaggaacacttggattcccaggacctattggcctccctggtccaaagggt
gaccaaggagagtctgcnnnnnnnnctggtattgctggagcaaaaggagagcgaggggac
ccggggttcccaggagagagagggagagaaggacccaagggtgaaccaggctacccagga
aacactggggtgaatggactcaaaggcggcccaggagatcttggccaagaaggaccagca
ggaatccctggaaatgctgggccgagaggaatccctgggccaccaggacctccagggcag
ccaggatctgtcggattccctggagctcgtggaacagcaggacctaaagggtttcatgga
tttccgggtttaaatggtctgaatggcttgccgggcacaaaagggtctcctggaacacca
ggtctgagtgaagctggactgaaaggccccgcaggtctcccaggtccgaagggtgaagaa
ggttctccaggcttgggtagaggaggcctaggattccctggaccaaaaggctcatcagga
gacatgggtccccctggtcctgtgggactgcctggcttgccaggaacacctggagtttct
cttccttctgatatacgtgggagacctggggatgcaggccatccgggaactgatgggagt
tcaggtcttccaggccctccaggaccccgagggccccctggcccagcttctgaccaaggg
gacacaggcactccaggtgtccctggtattcttggcttgcgaggcattaagggtgacgtg
ggacccactggtccaattggactccctggagcatctggattcaaaggtataagaggggag
cctggccttatggggatgccaggtaaagatgggcctccaggggatcctggccaccctggg
ctgaaaggcgaaacgggccaccgagggctccctggcctacaaggggctccaggtataacc
ccacagccagaagaaatcacagcccctgcaggcttacctggtctgccaggaatcgatggt
gtccctggctttgatggagatcctgggttccagggctcggctggaaaaccaggtgcaaaa
ggtctaccaggaagatctggtttgaaaggacgtgatggtttacctggagcacctggcata
gctggggatccaggacctttaggtgccccaggaccacaaggttttgaaggtgttgctgga
aagccgggctcacttggtttgccgggaatgcctggtcggagcgtgggcgttggatacact
ttagtgaagcacagtcagtcagaccaaatcccaccttgccccataggaatgaataagctc
tgggatggctacagcttattgtacgtggaggggcaggaaaaggcacacaaccaggatctt
ggttttgctggctcatgtttgcctcgcttcagcaccatgccttttatttactgcaacatc
aacgaagtgtgctactatgccagccgaaatgacaagtcctactggctctccaccactgct
cccatccccatgatgccagtggacagtgttcggatcccacagtacatcagtcgttgctca
gtctgtgaagcaccttcccaggccgtggccgtgcacagccaggacatcaccatcccgcag
tgtccccttggctggcgcagcctatggataggatactccttcctcatgcatactgcggct
ggcgcagaaggtggaggtcagtcccttgtctcacctggctcttgcttggaggatttccgt
gctactcccttcattgaatgcaacggtgccagaggaacgtgccattactttgcgaacaaa
tacagcttctggctgacgacggttgagcagtcgcagcagtttgtcagtgctcctccctca
gaaactctgaaagcaggacagcttcgaacaagggtcagccgttgccaagtgtgcatgaag
aacttgtag
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integrated database retrieval system
