Egretta garzetta (little egret): 104133405
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Entry
104133405 CDS
T05152
Symbol
LSM8
Name
(RefSeq) LSM8 homolog, U6 small nuclear RNA associated
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
egz
Egretta garzetta (little egret)
Pathway
egz03018
RNA degradation
egz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
egz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104133405 (LSM8)
09123 Folding, sorting and degradation
03018 RNA degradation
104133405 (LSM8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
egz03019
]
104133405 (LSM8)
03041 Spliceosome [BR:
egz03041
]
104133405 (LSM8)
Messenger RNA biogenesis [BR:
egz03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
104133405 (LSM8)
mRNA degradation factors
5'-3' decay
Lsm complex
104133405 (LSM8)
Spliceosome [BR:
egz03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
104133405 (LSM8)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
NAD_Gly3P_dh_N
Motif
Other DBs
NCBI-GeneID:
104133405
NCBI-ProteinID:
XP_009645094
LinkDB
All DBs
Position
Unknown
AA seq
107 aa
AA seq
DB search
MFQKMLMVLFQISNNFLNELLGTVAVITSDGRMIVGTLKGFDQTINLILDESHERVFSSS
QGVEQVVLGLYIVRGDNVAVIGEIDEETDSALDLGNIRAEPLNSVVH
NT seq
324 nt
NT seq
+upstream
nt +downstream
nt
atgtttcagaaaatgctaatggttctatttcagatatctaataatttccttaatgaacta
ttaggtactgttgcggtaattacttctgatggaagaatgattgtgggaaccctcaaaggt
tttgatcagaccattaacttgattttggatgaaagccatgaacgagtgttcagctcttca
caaggagttgagcaagtagtgctgggattatacatcgtaagaggcgataatgttgctgtc
attggtgaaattgatgaagagacagattcagctcttgacttggggaatattcgagcagaa
cctttaaactcagttgtgcactga
DBGET
integrated database retrieval system
