Egretta garzetta (little egret): 104133475
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Entry
104133475 CDS
T05152
Symbol
DDX46
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
egz
Egretta garzetta (little egret)
Pathway
egz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
egz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104133475 (DDX46)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
egz03041
]
104133475 (DDX46)
Enzymes [BR:
egz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104133475 (DDX46)
Spliceosome [BR:
egz03041
]
Complex A
U2 snRNP components
U2 related factors
104133475 (DDX46)
Complex B
104133475 (DDX46)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_12
KH-I_KHDC4-BBP
CdAMP_rec
Motif
Other DBs
NCBI-GeneID:
104133475
NCBI-ProteinID:
XP_009645179
LinkDB
All DBs
Position
Unknown
AA seq
1054 aa
AA seq
DB search
MRAGTWRVSGQARAAGHYRKRSASRGRSGSRSRSRSPSDKRKRGEDRRSRSRDRERRRER
SRSRDKRRSRSRDRKRQRRSRSRERERSRERRRSRSRERRRSRSRSRGRRSRSSSPSKNR
KTENRSRSKEKTEGVEVSKEKKKDKDDKEEEKDKDATTNTVATENFDQNKLEEEMRKRKE
RVEKWREEQRKKAMENIGELKKEIEEMKQGKKWSLEDDDDDEEETAEGEKEGNEVEDEEL
DPLDAYMEEVKEEVKKFNMRSVKGGGGSEKKSGPTVTKVVTVVTTKKAAAESEKKKGELM
ENDQDAMEYSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVPELAKM
TQEEVNVYRLELEGITVKGKGCPKPIKTWVQCGISMKILTALKKHGYEKPTPIQTQAIPA
IMNGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRALEEGEGPIAVIMTPTRELALQITKEC
KKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANNGRVTNLRRVTY
VVLDEADRMFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEALARRILSKPIEVQVGG
RSVVCSDVEQHVIVIEEENKFLKLLELLGHYQEKGSVIIFVDKQEHADGLLKDLMRASYP
CLSLHGGIDQYDRDSIINDFKNGICKLLVATSVAARGLDVKQLMLVVNYSCPNHYEDYVH
RAGRTGRAGNKGYAYTFITEDQARYAGDIIKALELSGNPIPTDLEKLWADFKDQQKAEGK
LIKKSSGFSGKGFKFDETEQALANERKKLQKAALGLQDSDDEDTAVDIDEQIESMFNSKK
RVKDMAAPGTSNAPTPSAGNAEKLEIAKRLALRINAQKNLGAEAQVLVPFHFKDVMQQAT
NAILRGGTIQAPTVSAKTIAEQLAEKINAKLNYVPIEKQEEEKQDGGQNESFKRYEEELE
INDFPQTARWKVTSKEALQRISEYSEAAITIRGTYFPPGKEPKEGERKIYLAIESANELA
VQKAKAEITRLIKEELIRLQNSYQPTNKGRYKVL
NT seq
3165 nt
NT seq
+upstream
nt +downstream
nt
atgcgggcggggacttggcgggtttcgggtcaggcccgtgctgccgggcattatcggaag
cgctctgcgtcacgtggacgctccggtagccgttctagaagtcgttctccatctgacaaa
agaaaacgtggagaagacagacgctctagaagtagagatcgagaacgtagacgtgagagg
tcacgcagtagggacaagagaaggtctcgatcgcgtgacagaaagcgtcaaagacgttca
agaagtagagaaagggaacggagccgagagagacgaagatcccggagccgagagaggagg
cgctctagaagcagaagtagaggtagacggtctcgatcctccagtccaagcaagaacagg
aaaacagaaaacagatcaagatctaaagaaaagacagaaggtgtggaagtttccaaagaa
aagaaaaaagacaaagacgacaaagaagaagagaaggataaagatgctaccacaaatact
gtggccactgagaattttgatcagaacaaactagaagaagaaatgagaaaacgaaaagaa
agagtggagaaatggagggaagaacaacgcaagaaggctatggaaaacattggagaactg
aaaaaagaaattgaagagatgaagcaggggaaaaaatggagtttagaagatgatgatgat
gatgaagaggaaactgcagaaggggaaaaagaaggcaatgaggttgaagatgaagagtta
gatcctttggatgcttacatggaagaagtcaaagaagaggtcaagaagttcaatatgaga
agtgtgaaaggtggaggtgggagtgaaaagaaatccggaccaactgttaccaaggtagta
accgtggtgacaaccaaaaaggcagctgcagagtcagagaagaagaaaggggagctcatg
gaaaatgaccaagatgcaatggagtattcctcagaagaggaggaggttgatcttcagact
gccctgactggctatcagaccaagcagagaaagctgctagaaccagtggatcatggaaag
atagagtacgaacctttcaggaaaaacttctatgttgaagtaccagaactggccaaaatg
actcaagaagaggtgaatgtgtacaggctggagttggagggaattacagtcaagggaaaa
ggctgccccaaaccaataaaaacctgggtacagtgtggtatttccatgaagattctcacc
gccctcaaaaagcatggctatgaaaagcccactcccattcaaacccaggctatcccagca
attatgaatggacgtgatttgattggcattgctaaaacaggaagtggaaaaactattgca
tttctgttgcccatgttcagacacattatggatcagagagcgttagaagaaggagaaggt
cccatagctgtcattatgacacctactcgtgagttggctttgcagattaccaaggagtgt
aagaaattctcaaagacacttgggcttcgggttgtctgtgtttatggaggaacaggaatc
agtgaacagatagctgaactcaaaagaggtgctgaaattattgtttgcacacctggacgt
atgattgacatgttagcagctaacaatggtcgggtgacaaatctccgtagagtcacgtat
gttgtacttgatgaagcagacagaatgttcgacatgggttttgagcctcaggttatgcgc
attgtagacaacgtcaggcctgatcgtcagacggtcatgttctctgctacttttcccaga
gctatggaggcattagctcggagaatcctaagtaaacctatagaagtgcaggtgggaggc
agaagcgttgtctgttctgatgtggagcaacatgttattgtcatagaagaggagaacaag
tttttgaagttactggagctactgggtcactatcaggagaaaggatcagttatcatattt
gtagataaacaagaacacgctgacgggttgttgaaagatttaatgagagcctcttatcct
tgcttgtctcttcatggaggcattgatcagtatgacagggatagcataattaatgatttc
aagaatggaatttgcaaacttctggtggccacatctgtagccgcaaggggcttggatgta
aaacaattgatgctggtggtcaattacagctgtcccaaccactacgaagattatgtgcac
cgagcaggccgaactggacgagccggcaataaagggtatgcatatacattcattactgag
gatcaggcacggtatgctggtgatatcattaaggctttggaattgtcggggaatccaatt
cctactgatttggagaagctctgggctgacttcaaagaccaacagaaggctgagggaaag
ttgatcaaaaaaagcagtggattctctggcaaaggttttaaatttgatgaaacagaacag
gctttggctaatgaaagaaagaagctacaaaaagcagctcttggcttgcaagattcggat
gatgaagatacagctgttgatatcgatgaacaaattgaaagcatgttcaattcaaagaaa
agagtaaaagacatggcagcaccaggaacatcaaatgctcctacaccgtcggctggcaat
gcagaaaaattggaaattgctaagagattggctttaagaattaatgcccagaagaatctt
ggagcagaggcacaagtattggtccccttccactttaaggacgtaatgcagcaggctaca
aatgctatcctgagaggaggcacaattcaagctcctactgtatctgccaagaccattgca
gagcaactggctgaaaaaatcaatgctaagctcaattatgtacccatagagaagcaggag
gaagagaaacaggatggaggacaaaatgaatcctttaagagatatgaagaagaattagag
atcaatgacttcccacagactgccagatggaaagttacctccaaagaagcgctacagagg
atcagtgaatattctgaagccgctatcaccatcagaggaacttatttccctccaggcaaa
gaacccaaggaaggagaacgaaagatttatttggctatagaaagtgccaatgagctggct
gtacagaaagcaaaggcagaaatcacacggcttataaaagaggagctcatcagattgcaa
aattcataccaaccaaccaacaaaggaagatacaaagttctatga
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