Egretta garzetta (little egret): 104133508
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Entry
104133508 CDS
T05152
Symbol
RAD50
Name
(RefSeq) DNA repair protein RAD50
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
egz
Egretta garzetta (little egret)
Pathway
egz03440
Homologous recombination
egz03450
Non-homologous end-joining
egz04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
egz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
104133508 (RAD50)
03450 Non-homologous end-joining
104133508 (RAD50)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
104133508 (RAD50)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
egz03032
]
104133508 (RAD50)
03400 DNA repair and recombination proteins [BR:
egz03400
]
104133508 (RAD50)
DNA replication proteins [BR:
egz03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
104133508 (RAD50)
DNA repair and recombination proteins [BR:
egz03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
104133508 (RAD50)
BRCA1-C complex
104133508 (RAD50)
NHEJ (non-homologous end-joining)
MRX complex
104133508 (RAD50)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
Rad50_zn_hook
AAA_15
AAA_21
SbcC_Walker_B
SMC_N
GGA_N-GAT
DUF2703
NPV_P10
AAA_29
AAA_13
Motif
Other DBs
NCBI-GeneID:
104133508
NCBI-ProteinID:
XP_009645217
UniProt:
A0A091IN49
LinkDB
All DBs
Position
Unknown
AA seq
1312 aa
AA seq
DB search
MSKIEKMSILGVRSFGVEDKDKQIITFFNPLTILVGPNGAGKTTIIECLKYISTGDFPPG
TKGNSFVHDPKVANETDVRAQIRLQFRDVNGELVAVQRSMVCTQKGKKTEFKTLEGVITR
TKHGEKVSLSSKCAEIDREMISALGVSKSVINNVIFCHQEESNWPLSEGKALKQKFDEIF
SATRYIKALETLRQVRLKQSLKVKECQTELKYLKQNKEKAQEIQDHLSNREAQLAASKEN
VKSIESQLEPLKNSLAAVEQNLTKVMRLDNDVKALESRRRQMEKDNQDLQQKMEKVFQGT
DEQLRDRYQNHQRTVKEKEKRLSDCKRELDRASKECQRFNSEKSELLIERGRLQLQADRH
QEHIATRDSLIQSLAAQLEFDGFERAPFNERHITSFHRLLKERQDRDMEAANHLMKEFAR
KEAMKQKQIDEIRDKKTGLERTIDLKSDIQNKKQVELKNVKYELQQLEGFSDRILELDQE
IVKTVHELEKAERNSNVEALEMEVQTLQNEKINLDKALRKLDQEMEQLNLHTMTITQMEM
LKKDKADKEEQIRKVKSRHSDELTSLLGYFPNKNQLEDWLHGKNKKINQTRDNLADLNKR
LASVEYHKTYVSNELKKKEAQLSLHETKLFDVCGSQDFDSDLNKLQDEIEKSSKQRAVLA
GATAVYSQFITQLTEENQSCCPVCQRVFQTEAELQDVISDLQSKLRLAPDKLKSTESELK
RKEKKRDEMMSLKPLRRTVVELQDKDIPDLRNKIQNANRDLTGLKGEIEEQESLLRTALS
EEEGAKARLQDITVMERYQTDIRDVERKIAQHEAKLLGVDLSRTVLQVSQEKQEKKHSWD
TVTGKIELNQKLKQDQQNQIQQLKSTVNELKAEKLQISSSMQRRRQLEEQTVELTTEVQS
LRREIKEAKEQVFPLDATLEKLQQEKEDLMDKRTASNKETQEKINGIKEKVKDINKYVKE
IENYIQQGKDDYKKQKESELEEVNSQLATCEKQKETISKEMEMIRQDIDTQKIQERWLED
NLTLRKRNEELKEVEDNIKHLVKEMGEMKVPQMKNEQKHLEEEIESLKRNHHVALGRQRG
FEEEIVRFKKELRESQFKDAEEKYREMMIVMRTTELVNKDLDLYYKALDKAIMTFHSMKM
EEINKIIRDLWRSTYRGQDIEYIEIRSDADENVSASDKRRSYNYRVVMIKGDTALDMRGR
CSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRSQQR
NFQLLVITHDEDFVELLGRSEYVETFYRIKKNIDQCSEIMKCSVSSLGSYVH
NT seq
3939 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagatagagaaaatgagtatcctcggagtgaggagttttggggtagaggacaaa
gacaaacaaattatcactttctttaatccgttaactattttggtgggaccaaatggtgca
ggaaaaacgactatcattgaatgtcttaaatacatatccacgggagattttcctcctggc
accaaaggaaactcgtttgttcacgatccaaaggttgccaatgaaacagatgttagagct
cagattcgattacagtttcgagatgtaaacggagagctcgtagctgtccagcgatccatg
gtctgtacccagaaaggcaagaaaacagaatttaaaacccttgaaggtgtcattactaga
acaaagcatggcgagaaggtcagtctgagttccaagtgtgcagaaattgatcgagagatg
atcagtgctcttggtgtttccaaatcggtgatcaataacgtcattttctgccaccaagaa
gaatccaactggccattaagtgaagggaaggccctgaagcaaaaatttgatgagatcttt
tcagcaacaaggtatattaaagcactggaaactcttcgtcaggtacgactgaaacaaagc
ttgaaagtaaaagaatgtcagacagaactgaaatacctaaaacagaataaagaaaaggca
caggaaatccaggatcatcttagcaatagagaggctcagctggctgcttctaaggagaat
gtaaaatccattgagagtcaactcgaacctctgaagaattctctagcagcagttgaacag
aatctcacaaaagtaatgaggctagacaacgatgtaaaagccctggagagcaggaggcgg
cagatggagaaagataatcaagatttgcaacagaagatggaaaaggtttttcaaggaaca
gatgaacaactaagggacaggtaccagaaccaccagagaacagtgaaggagaaggagaag
agattatcagactgtaagcgtgaattagatagagccagtaaagaatgccagagatttaac
agtgagaaatcggaactacttattgaacgaggtcgtcttcaactgcaggcagatcgtcac
caagaacacattgcaacgagggattccttaattcagtctttggcagcacagctggaattc
gatggttttgagcgagcaccttttaatgaaaggcacattaccagttttcacaggttgttg
aaggagagacaggacagagatatggaagctgcaaatcatttgatgaaagaatttgcacga
aaagaggcaatgaaacaaaaacagatagatgaaataagagacaagaaaacgggattagaa
agaaccattgacctgaaatcagacattcaaaataagaaacaagttgagctgaagaatgta
aaatatgaattgcagcagttggaggggttttccgacagaattctggagctggatcaggag
attgtcaagacagtacatgagctggagaaggctgagaggaacagcaatgtagaagcactc
gaaatggaagtacaaactctgcaaaatgagaaaataaacctggataaagctcttagaaag
ttggatcaagagatggaacagttgaatctacataccatgacaattacccaaatggagatg
ctgaagaaagacaaagcagacaaagaagagcagattagaaaagtgaagtcaaggcattct
gatgaactgacatcactgttgggatactttccgaataaaaaccaacttgaagactggctt
catggtaaaaacaaaaagattaatcagacaagggataatcttgctgaccttaacaaacga
ctggcatcagtggaatatcataaaacttatgtcagtaatgagctaaaaaaaaaagaagca
caattgtcccttcatgaaacaaaactttttgatgtttgtggaagccaagattttgacagt
gatctgaacaagcttcaagatgaaattgaaaaaagttcaaaacagcgagctgtgcttgct
ggagccactgcggtttattcacagttcattacacaactgacagaggaaaaccagtcatgt
tgtccagtttgtcaaagagtttttcaaacagaggctgaactgcaagatgtaattagtgat
ctgcagtccaagctgcgtcttgctccagacaaactgaagtcaacagagtctgagcttaaa
aggaaagagaaaaaacgtgatgaaatgatgagtcttaaaccacttcggcgaactgtagtt
gaactccaagacaaggacataccagacttgaggaacaagatacagaatgcaaacagagat
ttaacaggcctgaagggtgagatagaagaacaggaatcactcttgcggacagctttgtct
gaggaggaaggtgccaaggcacgtttacaggatataacagtaatggaaaggtaccagact
gatattagggatgttgaacgaaaaattgctcagcatgaggctaagctgctaggggtcgat
ttaagtagaactgttctacaagtaagccaagaaaaacaagagaaaaaacactcgtgggat
acagttactggtaaaattgagttaaatcaaaaactcaagcaagaccagcaaaatcagatt
cagcagctaaagagtacagttaatgagcttaaagcagagaaacttcagatttccagcagc
atgcagcgtcgtcgacaactggaggaacaaacagtggaattaaccactgaggttcagtcc
ttacggagagagatcaaggaagcaaaagaacaggtatttcctttggatgcaactttagaa
aaactgcagcaggagaaggaggatctaatggataaaaggactgcaagtaataaagaaaca
caagagaagataaatggcataaaagagaaagttaaagatataaacaagtacgtgaaagaa
attgaaaactatattcaacaaggaaaagatgactataaaaagcaaaaggagtctgaactt
gaagaagtaaattctcagttagctacctgtgagaaacagaaggaaacgataagtaaagag
atggaaatgattcgacaagatattgacactcaaaagatacaggaaaggtggctggaagat
aatcttactttgaggaaacggaatgaagagctaaaagaagttgaagacaatataaaacac
cttgtgaaggagatgggagaaatgaaagtcccgcaaatgaaaaatgaacaaaaacattta
gaggaggaaattgaatccctgaaaagaaaccatcatgttgcacttggccgacaacgtgga
tttgaggaagagattgttcggtttaaaaaggagcttcgagagtcgcaattcaaagatgcg
gaggaaaaatacagggagatgatgattgttatgagaacaacagagctggtgaacaaagat
ctggacctttattacaaggctctggataaagcaataatgacatttcatagcatgaagatg
gaagaaatcaacaaaataattcgtgacctttggcgaagcacctacagaggacaagatatt
gaatatatagaaatccgttctgatgcagatgagaatgtctcagcctctgataaaagaaga
agttacaattatagagtagtaatgataaagggagatacagcactggatatgcgaggaaga
tgtagtgctgggcaaaaggtgcttgcttctcttattattcgtcttgctctagcagaaaca
ttctgtctcaactgtggcatattggcactagatgagcctactaccaatcttgatcgagaa
aacatagagtctcttgcacacgccctggtggagataataaaaagccgctcacaacagcgt
aactttcagcttctggtgataactcacgatgaagattttgttgaacttctgggacgttct
gaatatgtggaaaccttctacaggataaagaagaacattgaccagtgctctgagatcatg
aaatgcagtgtcagctccctaggctcatatgttcattag
DBGET
integrated database retrieval system
