Egretta garzetta (little egret): 104133578
Help
Entry
104133578 CDS
T05152
Symbol
LMO7
Name
(RefSeq) LOW QUALITY PROTEIN: LIM domain only protein 7
KO
K06084
F-box protein 20
Organism
egz
Egretta garzetta (little egret)
Pathway
egz04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
egz00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
104133578 (LMO7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
egz04121
]
104133578 (LMO7)
Ubiquitin system [BR:
egz04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
104133578 (LMO7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4757
PDZ
LIM
PDZ_6
PDZ_2
DUF6288
Motif
Other DBs
NCBI-GeneID:
104133578
NCBI-ProteinID:
XP_035758296
LinkDB
All DBs
Position
Unknown
AA seq
1632 aa
AA seq
DB search
MHDSHKDDRSYRRISMIEPKPTTDFNRFLPNKNKQTAYVPAPLRKKRTEKNEDNRRSWAS
PVFTESDGTFSSGRERNPVASCQNSRAECGLTNPASLQMIYESDSDSEAERRLPDVVMDD
LAKRRFLVKKSPVSSAAPGHHFVLRNDSPKSCSQESYPAGPLAAMLEPLSNQRRQRQLDT
KEENKPRVNIPSELSGYFDEDEEEEIGIPNIEKDDLYFRKLSSSAANTVVAFDKFLPKFW
TPEEELLWKKIRKSSFKPWYKEIQGFSRKKSDSEDEEFAYKQSSAIVANQPRPNFDWNSS
CRRDQSYKPTAEYVGSSLSQIAEGKILEASDQPSQFSLLQALQKYTDYLSSETKTKIDPT
SGPRLVKCRKNISFVPGCKQGDAENGYLYPDLENDDLFVRKTGAFHVNQVVLQDPRYLKK
FSEQEPPLEGEIILQPREGQPVIPDLEKDDMIFRKILSQKKEVPLSGAPDKYHPALFFFD
PWSLPEEIRSKFLCLLEKNTTPEERKSNGRVLSPSSRHKKDDMLTRKIESWKAGSNVQPV
NFIPGPCSEEDWKKWEAIREASKVRHKKRQMVERLFQKLSDEQGSKSLNDVSAEELQSLR
KIRYEELQRIKEQLQEQDLKWQEGRTDLAKWKNRRKSFTYELQKKKEEREEIERRASEVS
ERSNKSLKEMQQEREDRDQDSYGQRKHERRWTYSLNDDVFSEEKAPSTQSATKDYLLEED
TSYSAKHSKSADAVQPRKENLRKSSAACEAPALPESLAEEQSSALLSARYSVNAQTGSAQ
VSASLPRSHQKTDSSRLTSVVTPRPFGVHSRGISSLPRSFTMDDTQKYNGEVEKTKRTQT
LFTSSSFSQPDSAHPLSARSFSSRGEEEEEEKEGVHSTPPPSLALPVKSQDQDAGSSILK
PEYCSPPDSLSLASSAENVSLPEPEDSKSLEQYSEMRISINQRPGHGRSFGFTTNWSSSG
AFVQTVEEGSPAALCQLHVDDEIIAINGTKVSHMDYSKWEEAIGKALETGNLVMDVRRYG
KNDWGKDQPSLPRVRHKILNLTSMATNIIGTSENKWIDATSGEHASNVSTVSTKRDFSSS
LQSSDTETKLINGMQGDLVSSEQRASEPISLKNLKRRSQFFXTGGPEPAMPDLPVPSITA
PSRRVWDQEEERKRQEKWQKEQDRLLQEKYKREQEKLREEWLRAKQEAEKESSKYFDEEQ
TVLTLNTTSVPARAPSVSSWRASPEANTPEEPEGDGESELEARLLGEEEERRRLQEEQKI
REEAALRFEQERELQELELERQRKEREQQYAEEQRQRAEMEEQRRQAERQREVSVETPQY
QRHYERYEVSKTIEDRAGHPLIDRHYERYEVSKTIEEQPGKSFADRDKSKSTSELNEFNT
VRNGTQSKYSERSWNAGESQKKSQKEHNLSAAELERQQILQEMRKKTSLHTDSSWIRQRS
SSIHKEPISLYSNSMRRGESLDNLDSSRTSSWRHHSWLNQSASSSSLSSSQDFSRPVSTS
NRAYMCTPSSSKAPSAAASARAPSVSQAAPQAQSPLSASQPGSQTRSRSVSGKKICSYCN
NVLGKGAAMIIESLGLCYHLQCFKCVACGCDLGGSRSGAEVRIRNNKLFCNDCYIRFKST
SSGGIDLLTDLN
NT seq
4899 nt
NT seq
+upstream
nt +downstream
nt
atgcatgactcccataaagatgacaggtcttaccgtaggatttctatgattgaaccgaaa
cctaccactgacttcaatcggttcttgcccaacaaaaacaagcagacggcgtatgtgcca
gcacccttaaggaagaagaggaccgagaagaatgaggacaacaggaggagctgggcaagt
cctgtcttcactgagtcagatggaacattttcaagtggacgtgaaaggaatcctgtagct
tcctgccaaaatagcagagcagagtgtgggctcacaaacccagcttccctccagatgatc
tatgagagtgactctgattcagaagctgaaagaaggctgcctgacgtggttatggatgac
ttagcaaaacgtagatttctagtcaaaaagagccctgtaagctctgccgcacctggacat
catttcgtgttgcgcaatgactctcctaaatcttgctcacaagaaagttatccagctggt
ccactagctgcaatgcttgaaccactgagtaaccagaggaggcagaggcagttggatact
aaagaggaaaacaaaccaagagttaacattccttcagaattatctgggtattttgatgag
gatgaggaagaagaaataggcattccaaacattgaaaaagatgatctctattttcgcaag
ctaagttcttcagcggcaaatacagtggttgcttttgacaaatttcttcctaagttttgg
actccagaagaagagttgctgtggaaaaaaatcaggaaatcctctttcaaaccctggtat
aaagagattcaagggttcagtagaaagaaatcggattctgaggatgaggaatttgcttac
aaacaaagctctgccattgttgctaatcaaccaagaccaaattttgactggaacagcagt
tgcagaagggatcagagctataaaccaactgctgaatatgtgggaagctcattgtcacag
attgcagaaggaaaaatcttggaggcttctgatcagcccagtcagttttcgttacttcag
gccctgcaaaaatacactgactacttgtcttctgaaacgaagaccaaaattgatcctact
tctggccctaggctcgtaaaatgtagaaagaatatttcctttgtaccaggatgcaagcaa
ggagatgcagaaaatggatatctatatcctgatttagaaaacgatgacttgttcgttcgg
aaaactggggctttccatgtgaatcaagttgttctccaagacccccggtatttaaaaaaa
ttctctgagcaggaacctcccctagagggtgagataattctgcaacccagagagggccaa
cctgtgattccagatttggaaaaagatgacatgattttccgtaaaatcctctctcagaaa
aaagaggtgcctttatcaggtgctccagacaagtatcacccagcactctttttttttgat
ccatggagtcttccagaggagatccggtccaaatttctatgtttacttgaaaaaaacaca
acaccggaggaaagaaagagcaacggcagagtgctgtcgccatcttcccgccataagaag
gacgatatgctgacccgcaagattgaatcttggaaggcgggaagcaacgtccagccagta
aatttcatccctggtccatgcagtgaagaagactggaagaagtgggaagcgatcagggag
gccagcaaagttagacacaagaaacggcagatggtggagagactgtttcaaaagctttca
gatgagcaagggagtaaatctttgaatgatgtcagcgcagaggagctgcagtcattgcgc
aaaatccgttatgaagagctacaaaggataaaagaacagttacaagaacaagatctaaag
tggcaggaaggaaggacggatctagctaaatggaagaatcgtagaaagagcttcacttac
gaattgcaaaagaaaaaggaagagagagaagaaatagaaaggagagcctctgaggtgtct
gaaaggagtaacaagtcactgaaagaaatgcagcaggagagggaggacagagatcaagac
tcctacgggcagcgaaagcatgaacgcagatggacgtattcgctgaatgatgacgtgttt
agtgaagaaaaagcaccttccacacagtcagccacaaaagattaccttttggaagaagat
acctcctacagcgctaagcacagcaaaagtgcggatgccgtacaaccgcgcaaggagaac
ctgcggaagagctcggccgcttgtgaagctcccgctctgccagagagcctggcagaggag
cagagctcggctcttttgtctgcccgctactcggtgaatgctcaaactgggtcagctcag
gtttcagcttctctccccagaagtcaccagaaaactgatagctctaggttaacatctgtg
gttacaccaagaccttttggtgtccactcaagaggaatctcgtcacttccacggtcgttc
acgatggatgatacccagaagtacaatggagaagtagaaaaaactaaaagaactcaaact
ttgttcactagcagttcattttcacaaccagactctgcacaccctctctccgctagatcg
ttcagcagcagaggtgaggaggaggaggaggaaaaagaaggtgttcactcaacacctcct
ccgagtttggcattacctgtaaaatcccaagaccaagatgctggaagcagtattcttaaa
ccagagtattgctctcctcctgattctctttcacttgcgtcttctgcagaaaatgtgagt
ctgccggagcctgaggattcaaaatccctggaacagtacagtgaaatgagaatcagtata
aaccagagacctggccacggtcgcagctttgggtttacaacgaactggagttcttcaggg
gcctttgtacagacagttgaagaaggtagccctgcagcactttgtcagctgcatgtagat
gatgagatcattgctatcaacggcacaaaggtttcacatatggactacagtaagtgggaa
gaagctatcggcaaagcactagaaactggaaacctggtcatggatgtcagacgatatgga
aagaatgactggggcaaagaccagccttccctgccacgtgtaaggcataaaatcctcaat
ctcaccagtatggctaccaacattataggtacatctgaaaataaatggattgatgcaact
tctggagaacatgcttcaaacgtttccaccgtatcaacaaaaagagatttctccagcagc
cttcaaagttctgatacagaaacaaagttgataaatggaatgcaaggagatcttgtctct
agcgaacaaagagcatctgaacctatttctttgaaaaacttaaaaagacggtcacagttt
tttntcacaggaggcccagagcctgcaatgcctgatctcccagtcccatccatcactgct
cctagtcgtcgggtttgggatcaagaagaagaacgaaaacgacaggaaaaatggcaaaag
gagcaggaccgtttattgcaggagaaatacaaacgagaacaagaaaaactgagggaagaa
tggctacgagctaagcaagaagcagaaaaagagagctccaagtattttgatgaggagcag
actgttctaaccttaaacacaacgtctgtccctgcacgggctccatctgtgtccagctgg
agagcaagccctgaagcaaatactcctgaggaaccagaaggcgatggagagagcgagctg
gaggcacgcttgctgggcgaggaagaagaaaggaggaggcttcaggaggaacagaagatc
cgggaagaagcagccctgcgttttgagcaggaaagggaactccaagaactggagcttgag
aggcaacgtaaagagagggagcagcaatatgctgaggagcagaggcagcgagcagagatg
gaggagcagaggcgccaggctgaaaggcagagggaggtgtcagtggagacacctcagtac
caaagacattatgagcgctatgaagtatctaaaacaatagaggatcgagctggccatcct
ctcattgacaggcattatgagcgttatgaagtttccaaaaccattgaggagcaacctggc
aagtcatttgctgacagggataagtccaagtcgacttcagaactgaatgaattcaacaca
gtcagaaatggtacccagagcaagtattcggagaggtcttggaacgcgggcgagtcacag
aagaaatctcagaaggagcacaacctgtctgcggcagagttggagagacagcaaatcctt
caggaaatgagaaagaaaacatctctacacacagacagcagctggattaggcagcgcagt
tccagtatacataaggagcctattagtctgtacagcaatagtatgagaagaggagagtct
ttggacaacctcgattcttcaagaacgagctcgtggaggcaccactcgtggctgaaccag
tctgcctcctcgtcatctctgtcctctagtcaagacttcagtcgcccggtgtccacttca
aaccgagcctacatgtgcactccttcctccagcaaagcaccttctgcggccgcctctgca
agagccccctctgtgtcccaggcagccccccaggctcagtctcccctctctgcttcccag
ccagggtcccagacacgcagcaggtcagtcagtgggaagaaaatctgttcatactgtaat
aacgttctgggcaaaggagcagccatgatcattgaatctcttggtctttgttatcattta
cagtgctttaagtgtgttgcctgtggatgcgacctcgggggatcccgctcaggagctgaa
gttaggatccgaaacaacaaactcttctgcaacgactgctatatcagatttaaaagtaca
agttcaggaggaattgatttacttacagatcttaattaa
DBGET
integrated database retrieval system
