Egretta garzetta (little egret): 104134033
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Entry
104134033 CDS
T05152
Symbol
VCAM1
Name
(RefSeq) vascular cell adhesion protein 1
KO
K06527
vascular cell adhesion molecule 1
Organism
egz
Egretta garzetta (little egret)
Pathway
egz04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
egz00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
104134033 (VCAM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
egz04515
]
104134033 (VCAM1)
04090 CD molecules [BR:
egz04090
]
104134033 (VCAM1)
04091 Lectins [BR:
egz04091
]
104134033 (VCAM1)
Cell adhesion molecules [BR:
egz04515
]
Immunoglobulin superfamily
VCAM
104134033 (VCAM1)
CD molecules [BR:
egz04090
]
Proteins
104134033 (VCAM1)
Lectins [BR:
egz04091
]
I-type lectins (Siglecs)
104134033 (VCAM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
V-set
C2-set_2
Ig_5
C2-set
DUF2808
Ig_4
Ig_C17orf99
Receptor_2B4
Motif
Other DBs
NCBI-GeneID:
104134033
NCBI-ProteinID:
XP_035758774
LinkDB
All DBs
Position
Unknown
AA seq
630 aa
AA seq
DB search
MGRTSQAVLIISYVLMTVKAFETELIPADRIAAQIGKTVILTCNSTGCASPRFSWRTQMD
SPLGGTVNNYGTYSTLTMNPVSILNSHAYLCTVFCAKEEKKEKTVKVELYSFPSDPVIEI
SPPVAGEPVTITCRIPEVYPSDRLEVLLKKGEDLLHTENFYGDSNTNTENKTVTYSFNPT
AGDTGKEITCVAKLPIDDMDFEPKERVTSQKLNINFGPQNTIITASPGNSPMEGDSVTLT
CVTESNPPAQIVWRKHLADESIQHLIENDVLSIPHARFSDSGLYMCEVINLVTNKTEKAT
MDIVIQGAPNITELSIEPSTTVQEGEKVSIQCSAESNPPPKIILRRKSDGADMGPYSEGR
TLLLPSVTFLNGGDYECIAENKFGKSKREITFNVEYGPKNTMISVIPATAVKEGETVTMK
CHSSGNPAPVISWKKKKATGESQKIFQGAVLTIQNVTSQDLGLYECEAYNQFGKEEKAVK
LLVQVPPQNITVLVYPSENVKEGENVTIASSTDSNPSSQMVLKKVHQEKEIILPSANGTF
ILYNATKNDTGRYLLDVFNGVGNNIKVIEIAVAGRKTGKTRSNDSTDYCVFLCNSNSSTW
NCNFDLRGKKSKDKWILQSCKSTQAESVIA
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgggaagaacaagccaagctgtgctaataatttcgtatgtgttaatgactgttaaagct
tttgaaacggagctgatacctgctgacagaattgctgcacagattggaaaaacagtcata
ctcacatgcaatagcactggctgtgcatcaccaaggttttcctggagaacccagatggac
agcccccttggaggaacagtgaacaactatgggacatactctaccttgactatgaatcca
gttagcattctgaattctcatgcttacctgtgtactgtcttctgtgctaaggaagagaaa
aaagagaagactgtcaaagttgaactttactctttccccagtgatcctgtcattgagatc
agtccaccagttgctggagaaccagtcacgatcacctgtagaattcctgaggtgtatcct
tctgatcgactggaagtactcctgaagaaaggggaagaccttcttcatacagaaaatttt
tatggagatagcaacacaaatacagagaacaaaactgtgacatattcatttaatcctacg
gctggagatactgggaaagagattacctgtgtggctaaattaccaattgatgatatggac
tttgaaccgaaagagagagtaacttctcagaaattgaatataaactttggtccacaaaat
actatcattactgcatctccaggcaactcgccaatggaaggagactctgtaaccctcact
tgtgtgactgagagtaatccaccagcacaaatagtttggagaaaacatctggctgatgaa
agcattcagcatctgatagaaaatgatgtcctttctattccccatgcccgtttctctgat
tcaggactgtacatgtgtgaagtaattaatctggtaactaataaaacagagaaagcaacc
atggacattgttatacaaggtgccccaaacatcacagaactctccattgagccttctaca
acagttcaagaaggagaaaaagtgtccatacaatgttctgctgagagtaaccctcctccc
aagattattttaaggagaaaatctgacggcgcagacatggggccttacagtgaggggaga
actctcctccttccatctgtgacattcctaaatggaggagactatgaatgtatagcagaa
aataagtttgggaaaagtaagcgtgaaataacatttaacgtggaatatgggccgaagaac
acaatgatctctgttatccctgctactgctgttaaagaaggggaaaccgtgacaatgaaa
tgtcattcttctggtaatccagctccagtgatctcttggaagaaaaaaaaggctactggg
gagtctcagaaaatttttcaaggtgcagttttaactatacagaatgtaacaagtcaagat
ctggggctctatgaatgtgaagcttataaccaatttggcaaagaagaaaaagctgtgaaa
ttacttgttcaagttcctccacaaaatattactgtgttagtatatccatcagaaaatgtc
aaagaaggagaaaatgtcactattgcatctagcacagacagtaacccatcatcacagatg
gtcctgaaaaaagtccatcaggagaaagaaattattctgccatcagcgaacggaaccttt
atactctacaatgccaccaaaaatgatacaggcagatatttgcttgatgttttcaatggg
gttggaaacaacatcaaagtgattgagatagctgttgcaggtaggaagactgggaaaacc
agatcaaatgatagcactgattattgcgttttcctgtgtaacagcaatagtagtacctgg
aattgcaattttgatctacgtggcaagaaaagcaaagataaatggatcctacagtcttgt
aaaagcactcaggctgaaagtgtgatcgcatga
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