KEGG   Egretta garzetta (little egret): 104134072
Entry
104134072         CDS       T05152                                 
Symbol
DDB2
Name
(RefSeq) DNA damage-binding protein 2 isoform X1
  KO
K10140  DNA damage-binding protein 2
Organism
egz  Egretta garzetta (little egret)
Pathway
egz03420  Nucleotide excision repair
egz04115  p53 signaling pathway
egz04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:egz00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    104134072 (DDB2)
  09124 Replication and repair
   03420 Nucleotide excision repair
    104134072 (DDB2)
 09140 Cellular Processes
  09143 Cell growth and death
   04115 p53 signaling pathway
    104134072 (DDB2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:egz04121]
    104134072 (DDB2)
   03400 DNA repair and recombination proteins [BR:egz03400]
    104134072 (DDB2)
Ubiquitin system [BR:egz04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     104134072 (DDB2)
DNA repair and recombination proteins [BR:egz03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      104134072 (DDB2)
SSDB
Motif
Pfam: Beta-prop_THOC3 WD40_Prp19 Beta-prop_WDR3_1st Beta-prop_WDR5 WD40_CDC20-Fz WD40 Beta-prop_EML_2 WD40_WDHD1_1st WDR55 Beta-prop_EML Beta-prop_WDR36-Utp21_1st Beta-prop_RIG_2nd Beta-prop_Aladin Beta-prop_EIPR1 Beta-prop_WDR75_1st Beta-prop_WDR19_1st EIF3I Beta-prop_WDR36-Utp21_2nd Beta-prop_IFT140_1st Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd WD40_RFWD3 Beta-prop_WDR3_2nd PEP5_VPS11_N Beta-prop_NUP159_NUP214 Beta-prop_Vps41 Beta-prop_TEP1_2nd Beta-prop_HPS5 NBCH_WD40
Other DBs
NCBI-GeneID: 104134072
NCBI-ProteinID: XP_009645874
LinkDB
Position
Unknown
AA seq 515 aa
MAPVNQPKDKKHERAHEHWPEEAKSAGKRKLDYEEQRNEPQAKKLFVRKTSKPPEKMGWG
GGGSMVRNNRVLFHQLERQRSIVHYVYQNMLGGSIRAQLRQCLQLPFLRSLASYRLFRTA
SPFDRRVTCLEWHPTHPSTVAVGSKGGDIILWDYEVLTKTCFIKGKGPGDSLGDIKFSPY
EAVKLYVASGDGTLSLQDLEGRAVQVISRTLDCGHEYHNVCCWYCSVDVSASCRAVVTGD
NVGNVVLLSTSGEEIWKLKLHKKKVTHVEFNSRCEWLLATASVDQTVKIWDLRNIKSKTN
FLHVLPHDKPVNAAYFSPTDGAKLLSTDQRSEIRVYSSSDWTKPQHLIPHPHRQFQHLTP
IKATWHPRYDLIVAGRYPDPKFPGYTVNELRTVDVFDGNTGEMVCQLHDPNASGIISLNK
FNPMGDTLASGMGFNILIWSREEMVAKKQEHLLKAMTEQGIGSWSLSRRGGQRQANPGTS
KLKANLLSWELEEMKTKSNDSKSQGRKRKGKDLEN
NT seq 1548 nt   +upstreamnt  +downstreamnt
atggctccagtgaaccagccaaaggacaagaagcatgagagggcacatgagcactggcca
gaagaggcaaaatcagctgggaagaggaaactggactacgaggaacaacggaatgagcca
caagcaaagaagttgtttgtgagaaagacatccaagcccccagagaaaatgggttggggt
ggaggtgggtccatggtgagaaacaacagagtcctcttccatcagctggagcggcagcgc
agcattgttcattatgtctaccagaacatgctgggaggctccattcgggcacagctcaga
cagtgtctacagctgccctttctgcgttctctcgcctcatatcgcctctttcgaacagca
agtccctttgacaggagagtgacatgcctggaatggcatccaacacaccccagtactgta
gctgttggttccaaaggtggagacatcatcctttgggactatgaagtacttactaaaacc
tgcttcataaaagggaaagggccaggagattctctcggagacatcaagttcagtccttat
gaggcagtgaagctttatgtggcatcaggggatggcaccctaagtctgcaggaccttgag
ggcagagcggtgcaggtgatctcccgtaccctggactgtggccatgagtaccataacgtt
tgttgctggtactgcagcgttgatgtttctgcaagctgccgtgcagtggtgacaggtgat
aatgtgggcaacgtggtcctgctcagcacttctggtgaagagatttggaagctgaaattg
cacaagaagaaggtgacacatgtggagtttaactcccgatgtgagtggttgttggccaca
gcatctgtggatcagacagtcaaaatctgggacctcagaaacatcaaaagcaaaacaaac
tttcttcatgtgcttcctcatgacaaacctgtcaatgccgcttacttcagcccaacagat
ggtgccaagctcctgagcacagaccagcgcagtgaaatcagggtttactcatcttcagac
tggaccaagccacagcatctgatcccacatccccatcggcagtttcagcacctcacgccc
attaaggcaacgtggcatcctcgctatgacctcattgtagcaggtcgctaccccgaccct
aagttccccgggtacacagtgaatgagctacgaactgttgatgtatttgatggaaacacg
ggggagatggtttgtcagctccatgatccaaatgcttctggtatcatctcgctcaataaa
tttaaccctatgggagacacgcttgcttctggcatgggctttaatattctgatctggagc
cgggaggagatggtggccaagaagcaagaacatcttttgaaagccatgacagaacagggg
attggaagctggagtttgtccagacgtggagggcagaggcaggcaaaccctgggacaagc
aaactcaaagctaacttactgtcttgggagctggaggagatgaaaacaaaaagcaacgat
tctaaatcacagggaaggaagcgaaaagggaaggatctagagaactga

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