Egretta garzetta (little egret): 104134147
Help
Entry
104134147 CDS
T05152
Symbol
THOC1
Name
(RefSeq) THO complex subunit 1 isoform X1
KO
K12878
THO complex subunit 1
Organism
egz
Egretta garzetta (little egret)
Pathway
egz03013
Nucleocytoplasmic transport
egz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
egz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104134147 (THOC1)
09122 Translation
03013 Nucleocytoplasmic transport
104134147 (THOC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
egz03019
]
104134147 (THOC1)
03041 Spliceosome [BR:
egz03041
]
104134147 (THOC1)
Messenger RNA biogenesis [BR:
egz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
104134147 (THOC1)
Spliceosome [BR:
egz03041
]
Complex C
Other components
EJC/TREX
104134147 (THOC1)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
104134147 (THOC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
efThoc1
Death
bDLD3
Motif
Other DBs
NCBI-GeneID:
104134147
NCBI-ProteinID:
XP_035758882
LinkDB
All DBs
Position
Unknown
AA seq
644 aa
AA seq
DB search
MFWQTSAREALNHKSIKPLLNAFNQIPGSENEKKCTLDQAFRVIVEEEIINKAPCENLLA
IISLAINGVTEGICTASTPFVLLGDVLDCLPLDQCDKIFTFVEKNVATWKSNTFYSAGKN
YLLRMCNDLLRRLSKSQNTVFCGRIQLFLARLFPLSEKSGLNLQSQFNLENVTVFNTNEH
ESTLGQKHTEEREEGMDVEEGEMGDDEAPTSCSIPIDYNLYRKFWSLQDYFRNPVQCYEK
VSWKTFLKYSEEVLAVFKSYKLDDTQASRKKLEELKTGGEHVYFAKFLTSEKLMDLQLSD
SNFRRHILLQYLILFQYLKGQVKFKSSNYVLTDEQSLWIEDTTKAVYQLLSENPPDGERF
SKMVEHILNTEENWNSWKNEGCPSFVKERPPDSKPMRPVRKRPAPEDFLGKGPNKKILMG
NEELTRLWNLCPDNMEACKSESREYMPTLEEFFEEAIEQADPENMVENKYKAVNNSNYGW
RALRLLARRSPHFFQPTNQQFKSLPEYLENMVIKLAKELPPPSEEIKTGEDEDEEDNDAL
LKENNESPEVQRDKAMTGEQIESFAIRLGEQWKALAPYLEMKDSDIRQIELDSEDMKMRA
KQLLVAWQDQEGAHATPENLIAALNKAGLSDLAESLSNDAESGS
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgttttggcagacgtctgctagagaggctctgaatcataaaagtattaagccattgctg
aatgcctttaaccagattcccgggagtgaaaatgaaaaaaagtgtaccttggatcaagct
tttagagttattgtagaagaggaaataataaacaaagctccatgtgaaaatctcctggca
attatttctcttgctattaatggagtcacagaaggtatctgcactgcatcaacccctttt
gtgcttctgggtgatgttctggattgcctgcctttggatcagtgtgacaaaattttcact
tttgtggagaaaaatgttgctacatggaaatcgaatacattttactctgcggggaaaaat
tacttgctacgaatgtgcaatgacctcctaagaagattatctaagtcacaaaacacagta
ttctgtggaagaattcagctgttcttggctaggttatttccgctttcagagaagtcagga
cttaacttgcagagtcagtttaacctggaaaatgtcactgttttcaataccaatgaacac
gagagcactctaggacagaagcacactgaggagagagaagaaggaatggacgtagaagaa
ggtgaaatgggagatgatgaagcaccaacaagttgttccattccaatagattataacctg
tatagaaaattctggtcacttcaagattattttagaaatcctgtgcagtgctatgagaag
gtctcatggaaaacttttcttaagtactcggaagaagttttggctgttttcaaaagttac
aaattggacgacactcaggcttcccgaaaaaagttggaagaactaaaaacaggaggagaa
catgtatattttgcaaagttcctaaccagtgaaaagctgatggatttacagctgagtgac
agtaactttcgccgtcacatcttgttgcagtacctaatactgtttcagtatctaaaggga
caggtcaaatttaaaagttcaaactatgttctaacagatgaacagtctctttggattgaa
gatactacaaaagctgtttaccagcttctttcagaaaatcctccagatggagaaaggttc
tcgaaaatggtagagcatatattaaatacagaagaaaactggaactcctggaaaaatgag
ggctgcccaagctttgtgaaagaaagacctcctgattctaagccaatgaggcctgtgaga
aagaggccagctccagaggacttcttagggaaaggaccaaacaaaaaaatccttatgggg
aatgaggaactgacccgcctttggaacttatgtcctgataacatggaagcttgtaaatct
gagagcagggaatatatgccaacgttggaggaattttttgaagaagctattgaacaagca
gatcctgaaaacatggttgaaaataagtacaaggctgtgaacaattccaactatggctgg
agagcgttgagacttctagctcgcagaagtccccacttcttccagccaacaaaccaacaa
ttcaagagtttacctgaatatctagaaaacatggtaatcaaattagccaaggagctacct
cctccttctgaagaaataaaaacaggcgaagatgaagatgaggaagataatgatgcttta
ttaaaagaaaacaatgaaagtcccgaggtgcaacgggacaaagccatgacgggcgaacaa
atcgagtcatttgctatcaggcttggggagcagtggaaggccttggccccctacttggaa
atgaaggattctgacatacggcagatcgagttggacagcgaggacatgaagatgagagcg
aagcagctgctggtcgcctggcaggatcaggagggcgcccacgcaaccccggagaacctg
atcgctgcgctgaacaaagctgggctaagcgacctcgcggaaagcctaagcaacgatgcc
gaaagtggcagctaa
DBGET
integrated database retrieval system
