Egretta garzetta (little egret): 104134601
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Entry
104134601 CDS
T05152
Symbol
MSH2
Name
(RefSeq) DNA mismatch repair protein Msh2
KO
K08735
DNA mismatch repair protein MSH2
Organism
egz
Egretta garzetta (little egret)
Pathway
egz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
egz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
104134601 (MSH2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
egz03400
]
104134601 (MSH2)
DNA repair and recombination proteins [BR:
egz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
104134601 (MSH2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_IV
AAA_27
MutS_I
Motif
Other DBs
NCBI-GeneID:
104134601
NCBI-ProteinID:
XP_035759547
LinkDB
All DBs
Position
Unknown
AA seq
851 aa
AA seq
DB search
MNFESFVRDLLLVRHYRVEVYKNKAGSKSIKENDWYLAYKGSPGNLAQFEEVLFANNDMS
TAIGVVGVKLSTADGQRVVGVGYVDTTLRKLSVCEFPDNDQFSNLEALLVQLGPKECVLP
GGETAGEMGKLRQVIQRGGILITDRKKADFTTKDIVQDLNRLLKSKKEEQMNSAALPEME
KQVAVSSLSAIIKFLELLSDESNFGQFELTAFDLSQYMVLDNAAVQALNLFQSSVENANT
AQSLAGLLNKCRTPQGQRLVNQWIKQPLMDKNRIEERLNLVEAFVVDPELRQCLQEDLLR
RFPDLNRLAKKFQRQAANLQDCYRMYQAINQLPNVVQALEKHEGAHQMLLLAVFITPLND
IYSDFSKFLEMIETTLDMDKVENHEFLVKASFDPNLTELREKMNELEEKMQSFLKSAAKE
LGLEAGKSIKLETNSQFGHHFRITCKEEKVLRNNSKYGIVDTQKNGVKFTNSKLSSVNDE
YIKNREEYEEAQDAIVKEIINIASGYAEPIQTMNDVIAQLDAIVSFAHVSNGAPVPYVRP
VILEKGQGRIVLKGARHPCIEVQDEVAFIPNDVTFEKGKQMFHIITGPNMGGKSTYIRQT
GVIVLMAQIGCFVPCDSAEITIVDCILARVGAGDSQLKGVSTFMAEMLETASILRTASEN
SLIIIDELGRGTSTYDGFGLAWAISEYIASKIHAFCMFATHFHELTALADQVPTVNNLHV
TALTSDDTLTMLYRVKEGVCDQSFGIHVAELAAFPKHVIESAREKALELEEFQNIGKSKE
SEGEPPAKKFYREREEGEKIIQDFLCQVKALPLTDMSEDDIKMKLKQLRNDVLAKNNGFV
NEIISRTKVTS
NT seq
2556 nt
NT seq
+upstream
nt +downstream
nt
atgaactttgaatcttttgtgagagatctgcttctggttcgtcattacagagttgaagtt
tacaagaacaaagcaggaagtaaatctatcaaagaaaatgactggtatttagcatacaag
ggttctccaggaaatctcgcccagtttgaggaagttctctttgccaacaatgatatgtca
acggccattggggttgtgggggttaagctgtctactgccgatggacaaagagtagtagga
gtggggtatgtcgacactacgctgagaaaactgagtgtctgtgagtttccagataatgat
cagttctcaaaccttgaagccctactggttcaactgggaccgaaggagtgtgtgctacca
ggaggagagactgcaggagagatgggaaaactacgacaagtcattcagaggggaggaatc
ctgattacagacaggaagaaggcggacttcaccactaaagatattgttcaggatctcaat
cgcttgttaaaatcaaaaaaagaagaacaaatgaatagtgcagcattgccagagatggaa
aagcaggttgctgtttcgtctttgtcagccattatcaagtttttagagttgctgtcagat
gagtctaattttggacaatttgaactgaccgcttttgatcttagtcaatatatggttcta
gataatgcagctgttcaagccctcaacctttttcagagttctgtggaaaatgctaacact
gcacagtcgctggctggtttactaaataaatgcagaacccctcaaggacaaagactagtt
aaccagtggatcaaacaaccacttatggacaagaatagaattgaagaaaggttgaatttg
gttgaagcttttgtggtggatccagaactacgtcagtgccttcaagaagatcttttgcgt
cgcttcccagatcttaaccgtctggcaaagaaatttcagagacaagcagcaaacttacag
gactgttaccgaatgtatcaggctattaatcaactgcctaatgttgtacaagcactggaa
aaacatgaaggagctcaccagatgttgttgttggcagtgtttataacacctcttaatgat
atctactctgacttctcgaagtttctggagatgatagagacaacattggacatggataag
gtggagaatcatgaatttcttgtcaaggcttcttttgatcctaatttgacagaattaaga
gagaagatgaatgaactggaagaaaaaatgcagtcctttttaaagagtgcagccaaagag
ctaggtttagaagctggcaaaagtatcaaactggagacaaattcacagtttggacatcac
tttcgaataacttgcaaggaagaaaaagttctccgtaacaattcaaaatacggaatagtt
gatacacagaagaatggtgtgaaatttactaacagcaaactgagctccgtcaatgacgaa
tatataaagaacagagaagagtatgaagaggctcaggatgcaattgttaaggaaatcatt
aacattgcttcaggttatgcagaaccaatacagacgatgaatgatgtgatagctcaatta
gatgcaattgtcagttttgctcacgtgtcaaacggagcaccagtgccgtatgtccgtcct
gtcattctggaaaagggacaaggaaggattgtgctgaaaggtgccaggcatccttgcatc
gaagtgcaagatgaggtggccttcatccccaatgatgttacatttgagaagggcaagcag
atgttccacattattactggccctaacatgggggggaaatcaacctacatccgacagaca
ggggtgatcgttcttatggcccaaattgggtgttttgtaccgtgcgactcggcagaaata
accattgtggattgtatcctggctcgggtgggagctggagacagtcaactgaaaggcgtg
tctactttcatggctgaaatgttagaaactgcttcaatcctcaggacagcatctgaaaac
tccctgataatcattgatgagctgggaagaggaacttctacctatgatggctttggctta
gcatgggctatttcagaatacattgctagcaaaatccatgctttctgtatgtttgctaca
cattttcatgaactaacagctcttgctgaccaagtgccaacagtaaataacctacatgtt
actgctctgaccagtgatgacacactgacaatgctttatcgtgtcaaggaaggtgtttgt
gaccagagttttggaatacatgtagcagagttggcggctttcccaaaacatgtgatagaa
agtgcaagagagaaagcattggagctggaggagtttcaaaatattggcaagtccaaggaa
tctgaaggagaaccaccagccaagaaattctacagagaaagagaggaaggtgaaaagata
attcaggattttctttgtcaagtgaaagcattgcccctgacagatatgtcagaagacgac
atcaaaatgaagctgaaacagctgagaaacgatgtgttggcaaagaacaatggttttgtg
aatgaaatcatttcccgaacaaaagttacatcatga
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