Egretta garzetta (little egret): 104134885
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Entry
104134885 CDS
T05152
Symbol
ARID1A
Name
(RefSeq) AT-rich interactive domain-containing protein 1A isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
egz
Egretta garzetta (little egret)
Pathway
egz03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
egz00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
104134885 (ARID1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
egz03000
]
104134885 (ARID1A)
03021 Transcription machinery [BR:
egz03021
]
104134885 (ARID1A)
03036 Chromosome and associated proteins [BR:
egz03036
]
104134885 (ARID1A)
Transcription factors [BR:
egz03000
]
Eukaryotic type
Helix-turn-helix
ARID
104134885 (ARID1A)
Transcription machinery [BR:
egz03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
104134885 (ARID1A)
Chromosome and associated proteins [BR:
egz03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
104134885 (ARID1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
104134885
NCBI-ProteinID:
XP_035759880
LinkDB
All DBs
Position
Unknown
AA seq
1898 aa
AA seq
DB search
MPSSPMDQMGKMRPQPYGGNNPYTQQQGPQAGPQQGHGYPGQPYGPQTPQRYPMGMQSRT
QSTMGSISYAQQIPPYGQQGPSAYGQQSQTPYYNQQSPHPQQQQPLFSQQPPSQTPHSQP
SYQQQQQPQSQPPQLQTSQPAYSQQQSQPPHQQSPTPYPQQQSTAQQHQQSQPPYSQQQS
QSPYQQQQQTQQTASSALSQQSSSYPQSQPPQQQSAYSQQRFPPPQELSQDSFGSQASSA
PSMASSKGQEDMNLNLQSRPSSLPDLSGSIDDLPMGTEGALSPGVSTSGISSSQGEQSNP
AQSPFSPHTSPHLPGIRGPSPSPVGSPASVAQSRSGPLSPAAVPGNQMPPRPPSGQSDSI
MHPSMNQSSIAQDRGYMQRNPQMPQYSSPQPGSALSPRQSSGGQMHAGMGPYQQNSMGSY
GPQGGQYGPQGGYPRQPNYNAMSNANYPSPGMGGSMNPMGAGSQVHGQTGVPPYSGLPPG
RMSHATMGNRPYGPNMANMPPQVGTGMCPPPGGMNRKAQEAAAAAMHAAANSIQNRPPGY
PNMNQGGMMGTGPPYGQGINSMAGMINPQGPPYPMGGNMANNSAGMAASPEMMGLGDVKL
TPATKMNNKADGTPKAESKSKKSSSSTTTNEKITKLYELGGEPERKIWVDRYLAFTEEKA
MGMTNLPAVGRKPLDLYRLYISVKEIGGLTQVNKNKKWRELATNLNVGTSSSAASSLKKQ
YIQCLYAFECKIERGEDPPPDIFAAADSKKSQTKIQPPSPAGSGSMQGPQTPQSTSSSMA
EGGDLKPPTPASTPPSQMPPLPGIRSNSVGLQDAFADGSDPTFQKRNSMTPNPGYQPSMN
TSDMMGRMSYEPNKDPYSSMRKAPGSDPFMSSGQGPNSGMGDPYNRAAGPGMANMGMGQR
QHYSYGGPYDRVRTEPGMGPEGNLATGTPQPNIMPSTPESGMYSPSRYPQQQQQQQRHDS
YGNQFSTQGTSSGSPFPSQQTTVYQQQQQNYKRPMDGSYGPPAKRHEGEMYNVPYSAGQG
QTQQQLPPAQTQQPSQQQTAQPSPQQDLYNQYGSTYPAADRRSAGGPQNQFPFQFGRDRV
SAPPGSNAQQNMPPQMMGGPIQSTPEGPQQGAMWQGRNEIGYSYPNRQSTGSAPQGPAYH
GVTRTDEILHSDQRVNHEGPWPSHGNRQPPYGPSAPVPPMTRPPQSNYQTPPSMQNHIPQ
VSSPAPLPRPLENRTSPSKSPFLHSGMKMQKAGPPVPASHITPAAVQPPMIRRDITFPPG
SVEATQPVLKQRRRLTAKDIGTPEAWRVMMSLKSGLLAESTWALDTINILLYDDNSIMTF
NLSQLPGLLELLVEYFRRCLIEIFGILKEYEVGDPGQRTLLDPERFCKSSASPHEEGEEE
DEPRSLNCEEEEEDEEEEEAAFSSKDKAPLESSEEKLVSKFDKLPVKVVQKNDPFVVDYS
DKLGRVQEFESGLLHWRIGGGDTTEHIQTHFESKTELPLTHKRASCTSVLRKRSAAESNL
STREGETPPSDSSSEKRITATMDDMLSARPGSLAGEEEEVKALETAKESSKFPFGISPAQ
SHRNIKILEDEPHSKDETPLCTLLDWQDSLAKRCICVSNIIRSLSFVPGNDFEMSKHPGL
LLILGKLILLHHKHPERKQAPLTYEKEEEQDQGVSCNKVEWWWDCLEMLRENTLVTLANI
SGQLDLSPYPESICLPILDGLLHWAVCPSAEAQDPFPTLGPNAVLSPQRLVLETLSKLSI
QDNNVDLILATPPFSRLEKLYSTMVRFLSDRKNPVCREMAVVLLANLAQGDSLAARAIAV
QKGSIGNLLGFLEDSLAATQFQQSQAGLMHMQNPPFESTSVDMMRRAARALLALAKVDEN
HSEFTLYESRLLDISVSPLMNSLVSQVICDVLFLIGQS
NT seq
5697 nt
NT seq
+upstream
nt +downstream
nt
atgccttcaagcccaatggatcagatggggaagatgaggcctcagccatatggaggaaac
aacccatacacacaacaacaaggacctcaagcagggccacagcaaggacatggctatcca
ggacagccgtatgggccacaaactccccagagatatcccatgggaatgcaaagcaggacg
caaagtacaatgggcagcatctcatatgcacagcagattcctccttatgggcagcagggc
cccagtgcatatgggcagcaaagccagactccatattacaaccagcaaagccctcatccc
caacagcagcagcctctgttttctcagcagcctccatcccagacccctcactctcagcct
tcttatcagcagcagcaacagcctcagtctcaacctccacaacttcagacatcgcagcct
gcctattctcagcagcaatcccagccgccccatcagcagtccccaactccatatcctcaa
cagcagtccacagcccagcaacaccaacagagtcaacctccctactcgcagcagcagtca
cagtcgccctaccagcagcagcaacaaactcagcagacggcttcctcggctctttctcag
cagtcatcttcatacccccagtcacagccgccgcagcagcagtctgcgtactcccagcaa
cgcttcccccctcctcaggagttatctcaagactcatttgggtcccaggcatcatctgct
ccctcaatggcttccagtaaagggcaagaagatatgaacttgaatcttcagtccagacct
tctagcctgccggacctgtctggttcaatagatgatctacccatgggtacagaaggagcc
ctgagtcctggagtaagcacatcagggatttccagcagtcaaggagagcagagtaaccca
gctcagtctcctttctctccacatacctctcctcacctgccaggcatcagaggaccctcc
ccatccccagttggatctccagctagtgttgctcagtcccgctctggtccgctttcacct
gctgcagtaccaggcaatcagatgccaccccgaccgcccagtggccagtcggacagtatc
atgcatccttccatgaaccagtcaagcatagcgcaagatcgaggttacatgcagaggaat
cctcagatgccccagtacagctcaccccagcccggctcagccttatctccccgtcagtct
tctggaggacagatgcacgctggaatggggccataccagcagaactccatgggaagctat
ggaccccagggcgggcagtacggacctcaaggaggttatcccaggcagccaaactacaat
gctatgtccaacgccaactaccccagtccaggaatgggaggaagcatgaaccccatggga
gcagggagccaggtgcacgggcagactggtgtgccaccatacagcgggcttcctccaggg
aggatgagccatgcaaccatggggaacagaccttatggacctaacatggcgaatatgccg
cctcaggtggggacagggatgtgccccccaccaggtggcatgaatcgcaaagcacaagaa
gcggctgctgccgccatgcatgctgctgccaactccatccagaacaggcctcctggttat
cccaacatgaatcaaggtggaatgatgggcactggacctccttatggacagggaattaac
agtatggctggcatgataaacccccagggcccaccctatccgatgggtgggaatatggct
aacaactctgcagggatggcagcaagccctgaaatgatgggtcttggggatgtcaaatta
acacctgcaactaaaatgaacaataaggcagatgggacgccaaaagcagaatccaagtca
aagaagtccagttcctctactacaaccaatgagaagatcaccaaactctatgagctgggt
ggtgagcctgagaggaagatttgggtagatcgttacctggcctttactgaagagaaggcc
atgggcatgacaaatctcccagcggtaggcaggaaacccctggacctttaccggctctac
atctcggtgaaggagattggaggattgactcaggtcaacaaaaacaagaaatggcgcgag
ttagccacaaatctcaatgtgggcacgtccagcagtgcagctagttctttgaagaagcag
tacatccagtgtctctatgcctttgagtgcaagattgagcgaggtgaagacccccctcca
gatatctttgcagctgccgattcaaagaagtctcagactaagatacagcctccatctcca
gcgggttcaggctcgatgcagggtcctcagacacctcagtccaccagcagctccatggca
gaaggaggagacctgaagccaccaactccagcatctacaccacccagtcagatgccccct
ttgccaggcatcaggagtaactcagtgggccttcaggatgcctttgcagatggtagtgat
cctacgttccagaagcggaactccatgactccaaatccagggtaccagcccagcatgaat
acctccgacatgatgggtcgcatgtcttacgagccaaataaagatccttacagcagtatg
aggaaagctccaggaagcgatcccttcatgtcctcagggcagggccccaacagtggtatg
ggtgacccttacaatcgtgctgcaggtccagggatggctaacatgggcatgggacagcgg
caacactattcctacggaggtccttacgacagagtgaggacggagcccggcatgggacct
gagggcaacttagcaaccggaactccgcagccaaacatcatgccttccacccctgaatcg
gggatgtactctcccagccgctacccgcagcagcagcagcagcagcaaagacatgattcc
tatggcaatcaattctccactcaaggcacatcctcgggcagccccttccctagccagcaa
actaccgtgtatcaacagcaacagcagaattacaagcgaccgatggatggcagctacggc
ccgcctgctaagcgacacgaaggggagatgtacaatgtaccatacagcgccgggcagggg
cagacgcagcagcagctgcccccagcacagacccagcagcccagccagcagcaaactgca
cagccgtctccacagcaggacttgtataaccagtatgggagtacataccctgctgctgac
cgccgatctgccggagggccacagaaccagttcccattccaatttggcagagacagggtc
tcggctcccccaggctccaatgctcagcaaaacatgcctcctcagatgatgggtggtccc
atacagtctactccagagggcccgcagcaaggcgccatgtggcaagggcgcaacgaaata
gggtacagctatccgaatcggcagagcactggctctgcgccccaggggcctgcttatcac
ggagtgactcgaacagatgaaattctgcattcagaccagagggtcaaccatgagggacca
tggccttcccacgggaaccggcaacctccttatggtccctctgcccctgtgcccccaatg
actaggccaccccagtctaactaccagaccccccctagcatgcagaatcacattcctcag
gtatccagcccagcacctctgcccagacctctggagaatcgcacttctcctagtaaatct
ccattcctgcactcggggatgaaaatgcagaaggcaggaccgccagtccctgcctcgcat
ataacaccagcagctgtacagcctcccatgatccgacgagacatcaccttccctccggga
tcagtagaagctacgcaacctgtgttgaagcagaggagacggctgacagcgaaagatatc
ggaactcctgaagcctggagagtgatgatgtctctgaagtctgggctgctagctgaaagt
acgtgggccttagataccataaacatcctgctctatgatgacaacagcataatgaccttc
aacctcagccagctgccaggcttgctggaactcttggtggagtatttccggcgctgcctg
atcgagatctttggaatcctgaaggaatatgaggtgggagacccagggcaaagaacacta
ttagatcccgaaaggttctgcaaatcttcagcttcccctcatgaagaaggggaggaggag
gatgaaccacggagcctgaactgcgaggaggaagaagaggatgaggaagaggaggaggct
gcgttttcaagcaaggacaaggcacctctggagagcagtgaggaaaaactagttagtaaa
tttgacaagcttccagtcaaggtcgtgcagaaaaatgacccatttgtggtagattattca
gacaagttggggcgagtgcaggagttcgaaagcggactgctgcactggcggattggcggc
ggagacaccaccgagcacattcagacccactttgagagcaagacggagctacctttgact
cataaacgagcttcctgcacctctgtcttgaggaaacgttcagcagctgagagcaatctg
agcactagggaaggagagactcctccatccgacagctcctcggagaagaggataactgcc
accatggacgacatgctttcagcacgtccgggctccctggcaggggaggaggaagaggtc
aaagctttggaaacggcgaaggaaagcagcaagtttccctttggcattagtccagctcag
agccacagaaatataaaaattctggaggacgaacctcacagtaaagacgagacgcccctc
tgcaccctcctagactggcaggactctctggcgaagcgctgcatctgtgtctctaacatc
atcaggagtttatcgtttgtgccgggcaatgactttgaaatgtctaaacatcccgggctg
ctgctgattctagggaaattgattcttttacaccacaagcatccagaacgcaaacaggca
cccctgacctatgagaaagaggaggagcaggaccaaggggtgagctgcaacaaggtggag
tggtggtgggactgcttggagatgctgcgtgaaaacacactggtcacgttggccaacatt
tctggccagctggacctctccccttacccggaaagcatctgtttgcctatcctggatgga
ctcctccactgggcagtctgtccatcagcagaggcccaggatccctttccaacactgggg
cccaacgcggtcctctcccctcagagactggttttggaaacactcagcaaactcagcatc
caggacaacaacgtggatttgattcttgcaactccccccttcagtcgcttggagaagctg
tacagcaccatggtgcggttccttagtgacagaaagaacccggtgtgtcgagagatggct
gtggtactactggccaacttggcacagggggacagcctggcagcaagagcgattgctgtg
cagaagggcagcattggcaacttgctgggcttcttggaggacagcctggccgccacacag
ttccagcagagccaggccggcttgatgcacatgcagaacccgccctttgagtcgacgagc
gtggacatgatgcgccgagctgctcgggcgctgctcgccctggccaaggtggacgagaac
cactcggagttcacgttatacgagtcacggctgttggacatctccgtgtcgcctttgatg
aactctttggtttcacaagttatttgtgatgtactgtttttaattggccagtcatga
DBGET
integrated database retrieval system
