Egretta garzetta (little egret): 104135055
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Entry
104135055 CDS
T05152
Symbol
CHD1
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1 isoform X1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
egz
Egretta garzetta (little egret)
Brite
KEGG Orthology (KO) [BR:
egz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
egz03021
]
104135055 (CHD1)
03036 Chromosome and associated proteins [BR:
egz03036
]
104135055 (CHD1)
Transcription machinery [BR:
egz03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
104135055 (CHD1)
Chromosome and associated proteins [BR:
egz03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
104135055 (CHD1)
SLIK complex
104135055 (CHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD1_Hrp3
CDH1_2_SANT_HL1
CHD1-like_C
Helicase_C
Chromo
DUF7855_C
Motif
Other DBs
NCBI-GeneID:
104135055
NCBI-ProteinID:
XP_009646957
UniProt:
A0A091IRL8
LinkDB
All DBs
Position
Unknown
AA seq
1811 aa
AA seq
DB search
MNGHSDEESVRNSSGESSQSDDDSGSASGSGSGSSSGSSSDGSSSQSGSSDSDSGSESGT
QSESESDTSREKKQIQAKPPKVDGSEFWKSSPSILAVQRSAVLKKQQQQQKAASSDSGSE
EDSSSSEDSADDSSSETKKKKHKDEDWQMSGSGSVSGTGSDSESEEDREKSSCEESESDY
EPKNKVKSRKPPSRIKPKSGKKSAGLKKRQLDSSEDEEEEEEDDDDDYDKRGSRRQATVN
VSYKEAEETKTDSDDLLEVCGEDVPQTEEDEFETIEKFMDSRVGRKGATGAATTIYAIEA
DGDPNAGFEKSKEPGEIQYLIKWKGWSHIHNTWETEETLKQQNVKGMKKLDNYKKKDQET
KRWLKNASPEDVEYYNCQQELTDDLHKQYQIVERIIAHSNQKSAAGYPDYYCKWQGLPYS
ECSWEDGALIAKKFQARIDEYFSRNQSKTTPFKDCKVLKQRPRFVALKKQPTYIGGHESL
ELRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPL
STLTSWQREIQTWAPQMNAVVYLGDITSRNMIRTHEWMHPQTKRLKFNILLTTYEILLKD
KSFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHF
IMPEKFSSWEDFEEEHGKGREYGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMS
ALQKQYYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDDNEFYNKQEA
LQHLIRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIK
GELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAH
RIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRMDTTGKTVLHTGSTPSSSTP
FNKEELSAILKFGAEELFKEPEGEEQEPQEMDIDEILKRAETRENEPGPLTVGDELLSQF
KVANFSNMDEDDIELEPERNSRNWEEIIPEVQRRRIEEEERQKELEEIYMLPRMRNCAKQ
ISFNGSEGRRSRSRRYSGSDSDSISERKRPKKRGRPRTIPRENIKGFSDAEIRRFIKSYK
KFGGPLERLDAVARDAELVDKSETDLRRLGELVHNGCIKALKDNSSGQERAGGRLGKVKG
PTFRISGVQVNAKLVISHEEELAPLHKSIPSDPEERKRYVIPCHTKAAHFDIDWGKEDDS
NLLIGIYEYGYGSWEMIKMDPDLSLTQKILPDDPDKKPQAKQLQTRADYLIKLLNKDLAR
KEAQRLAGAGSSKRRKTRTKKNKVIKAAKIKEEKSDSSPQPSEKSDEDDDEDNKDEIVSV
KHPHKKIKAEKENEEKPEPDIGIKKEAEEKRETKEKENKRDLKREKKEKEDKKELKEKDI
KEKRENKVKESTQKEKEVKEEKVNEIKSENKEKTKKIPLLDTPVHITATSEPVPILEESE
ELDQKTFSVCKERMRPVKAALKQLDRPEKGLSEREQLEHTRQCLIKIGDHITECLKEYTN
PEQIKQWRKNLWIFVSKFTEFDARKLHKLYKHAIKKRQESQQHSDQNISSNVNTHVIRNP
DVERLKENTNHDDSSRDSYSSDRHSSQYHDHHKDRHQGDAYKKNDSRKRPYSAFSNGKDH
RDWDHYKQDSRYYSDSKHRKLDDYRSRDHRSNLEGSLKDSRAHSDHRSHSDHRIHSDHRS
TSEYSHHKSSRDYRYHSDWQMDHRASGSGPRSPLDQRSPYGSRSPLGHRSPFEHSSDHKS
TPEHTWSSRKT
NT seq
5436 nt
NT seq
+upstream
nt +downstream
nt
atgaatgggcacagcgatgaagaaagtgtaagaaacagtagtggagagtcaagccaatca
gatgacgattccgggtcagcatcaggctctggatctggttcaagctctggaagcagtagt
gatggaagcagcagccagtcaggcagcagtgactctgactctggttcagagtcgggcact
cagtcagaatcggagtctgacacatctagagagaagaaacaaattcaagctaagccacca
aaagtagatggatctgagttttggaagtctagtccaagtatacttgctgtgcaaagatca
gccgtgctcaagaagcaacagcaacaacaaaaggcagcctcatcagacagtggttcagaa
gaggactcatcaagtagtgaagattctgcagatgactcatccagtgaaaccaagaagaaa
aaacataaagatgaagactggcaaatgtcgggatcagggtctgtatcaggaactggttct
gattctgaatcagaggaagatagagagaaaagcagttgtgaagagagtgaatctgactat
gagccaaaaaacaaggtcaaaagccggaaacctccaagcaggattaagccaaaaagtggg
aaaaagagtgcaggactgaaaaagaggcaacttgattcatcagaggacgaggaggaggaa
gaagaggatgatgatgatgattatgataagagaggatctcgtcgccaggcaacagtcaat
gtcagttacaaagaagctgaagaaaccaagacagattctgatgatttgctggaagtttgt
ggagaagatgtcccacaaactgaagaagatgaatttgaaactatagagaagttcatggat
agtagagttggccgaaaaggagccacgggtgctgcaaccaccatctatgcaattgaggca
gatggtgacccaaatgctggatttgaaaagtcaaaagagccaggagaaatacagtatctt
attaaatggaaaggttggtcacacatccataacacttgggaaactgaggaaacactgaag
caacaaaatgttaaaggaatgaagaagctggacaactataagaaaaaggatcaggaaaca
aaacgatggctgaaaaatgcttctccagaggatgtggaatattacaactgccagcaggag
cttacagatgatctacataagcagtatcagatagtggaaagaataattgctcattcaaat
cagaaatcagcagctggttatccagactactactgcaaatggcagggtctgccttattca
gaatgtagctgggaagatggtgctctcattgccaaaaagtttcaggcacgcattgatgag
tacttcagcagaaatcaatccaagaccactccatttaaggattgcaaggttctaaaacag
aggccaaggtttgttgcactaaagaagcaaccaacttacattggaggacatgaaagttta
gagttaagagattatcagttaaatggattgaattggcttgctcactcgtggtgcaaaggg
aatagctgtattcttgcggatgaaatgggtctgggcaaaacaatacaaacaatttctttt
ctgaactacctgtttcacgaacatcagttgtatgggcctttcttgctggttgtgccactt
tcaaccttgacatcttggcaaagagagattcaaacgtgggctcctcagatgaatgctgta
gtttacttaggagatataactagcagaaatatgattagaactcatgaatggatgcatcca
cagaccaaacgattaaaatttaacatacttctaacaacatacgaaattttgctgaaagat
aagtcattccttggtggtctgaattgggcattcataggagttgatgaagctcatcgttta
aaaaatgacgactctcttctgtacaagactttaatagacttcaagtctaaccatcgtctt
ctcattactggaacccctctgcaaaactccctcaaagagctttggtctttgttgcacttc
atcatgccagaaaagttttcctcctgggaagattttgaagaggagcatggcaaagggagg
gagtatggttatgcaagtcttcacaaagaacttgaaccatttctgctgagaagagttaaa
aaagatgtagaaaagtctttacctgctaaagttgagcaaattctgaggatggaaatgagt
gcactgcagaagcaatattacaagtggattctaaccaggaattataaagctctcagtaaa
ggttcaaaaggcagtacctcaggctttttgaacatcatgatggaactcaagaagtgttgt
aaccattgctacctcattaaaccaccagatgataatgaattctataataaacaggaggcc
ttacagcatttaatacgcagcagcgggaaactaatccttcttgacaaactcctgattcgt
ctgcgagaacgtggcaacagagttctgattttctcacagatggtgaggatgctggacatc
ctagcagaatatctgaaatatcgtcagtttccctttcagaggcttgatggatcaataaaa
ggggaattgaggaaacaagcactggatcattttaatgcagaaggatcagaggacttctgc
tttttactgtctacgagagctggaggattaggtatcaacttggcctctgctgacactgta
gttatatttgattctgactggaatccacagaacgatctgcaagcacaagctagagcacat
agaattggacagaagaaacaggttaatatttatcggctagtcacaaaaggatcagtagaa
gaagatattcttgaaagagccaagaaaaagatggtgttagatcatttagtaattcagaga
atggacactacagggaaaactgtactacatacaggctctactccttcaagctcaacgcct
tttaataaggaggagttatcagcgattttgaagtttggtgctgaggaactttttaaagaa
cctgaaggggaagaacaggagccccaggaaatggatatagatgaaatcttgaagagggct
gaaactcgggaaaatgagccaggtccattaactgtaggagatgagttactttcacagttc
aaggtggccaacttttccaatatggatgaagatgatatcgagttggaaccagaaagaaat
tcaagaaattgggaagaaatcattccagaagtccagcggcgaagaatagaagaggaggaa
agacaaaaagagcttgaagaaatatacatgctcccaaggatgaggaactgtgcaaaacag
atcagctttaatggaagtgaagggaggcgcagtaggagcagaagatactctggatctgat
agtgactccatctcggaaagaaaacggccaaaaaaacgtggaagaccacgaactattcct
cgagaaaatattaaaggatttagtgatgcagagatcagacggtttatcaagagttacaag
aaatttggtggccctcttgaaaggttagatgctgtagctagagatgctgagctagttgat
aaatcagagacagatcttagacgtttgggagagcttgtacataatggatgcattaaagct
ttaaaggacaattcatctggacaagaaagagcaggaggtagacttgggaaagttaaaggc
ccaacattccgaatctcaggagtgcaggtgaacgcaaagctagtcatctctcatgaagaa
gagttggcaccgttgcacaaatccattccttcagatccagaagaaagaaaaagatatgtc
atcccatgccacaccaaggctgctcattttgatatagattggggtaaggaagatgattcc
aatctgttaataggcatctatgaatatggttatggcagctgggaaatgataaaaatggat
cctgatcttagtttgacacagaagattttgcctgatgatccagataagaaaccccaggcg
aagcagttacagacccgtgcagactacctcattaaattactgaataaagaccttgcaagg
aaggaagcacaaaggcttgctggtgcaggcagttcaaagaggaggaaaacaagaactaag
aagaataaggtgataaaggcagcaaaaataaaagaagaaaaaagtgattcttcaccacaa
ccctcagaaaaatctgatgaagatgatgatgaggataacaaggatgagattgtttcagtg
aaacatccacataaaaaaattaaagcagaaaaagaaaatgaagaaaagcctgagccagat
attggtataaagaaggaagctgaagaaaaaagagagacaaaagaaaaggaaaataagagg
gatttgaaaagggagaaaaaagaaaaagaggataagaaagaattaaaagaaaaagatatt
aaagaaaagagagaaaacaaagtaaaagaatccacacagaaagaaaaagaagtgaaggaa
gagaaggtaaatgaaatcaaatctgaaaataaagaaaaaactaaaaaaattccattgttg
gatactccagttcacattactgcaactagtgaaccagttcctatattggaagaatctgaa
gaactggatcagaaaactttcagtgtgtgcaaagaaagaatgaggcctgtcaaagccgca
ttgaaacagctggatcgaccagagaagggcctttctgaaagagagcagctggaacatact
agacagtgtctaatcaaaattggggatcacattactgaatgtctaaaggagtacacaaat
cctgaacaaattaaacagtggagaaaaaatttgtggatttttgtctctaagtttacagaa
tttgatgccagaaagctgcacaaactgtataaacatgcaatcaaaaaacgccaagagtct
cagcaacacagtgaccagaatattagcagcaatgtgaatacacatgtaattagaaatcca
gatgtggaaagactaaaggagaacacaaaccacgatgacagtagcagggacagctattct
tctgataggcattcttcacaataccatgatcatcataaagacaggcatcagggagatgct
tacaagaaaaatgactctaggaaaaggccctattcagccttcagcaatggaaaagatcac
agagactgggatcactacaaacaagacagcagatactacagtgacagtaaacatagaaag
ttagatgactacaggagcagagaccacaggtcaaacctggaaggaagtttaaaagacagc
cgggctcattcagatcaccgttcccattcagaccacaggatacattcagatcaccgttcc
acttcagagtacagccatcataaatcttctagagattacagataccactcagactggcaa
atggaccacagagcttcgggtagtggcccaaggtcaccattagatcagaggtctccttat
ggttcaagatctcccctaggacacagatctccatttgaacactcatcagatcacaaaagt
acacctgaacatacatggagtagccggaaaacataa
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integrated database retrieval system
