Egretta garzetta (little egret): 104135130
Help
Entry
104135130 CDS
T05152
Symbol
SOX5
Name
(RefSeq) transcription factor SOX-5 isoform X1
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
egz
Egretta garzetta (little egret)
Brite
KEGG Orthology (KO) [BR:
egz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
egz03000
]
104135130 (SOX5)
Transcription factors [BR:
egz03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
104135130 (SOX5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Activator_LAG-3
Motif
Other DBs
NCBI-GeneID:
104135130
NCBI-ProteinID:
XP_009647036
LinkDB
All DBs
Position
Unknown
AA seq
626 aa
AA seq
DB search
MSSKRPASPYGEADGEVAMVTSRQKVGEEESDGLPAFHLPLHVSFPNKPHSEEFQPVSLL
TQENCGHRTPTSQHNTMEVDGNKVMSSFAPHNSSTSPLKAEEGGRQSGESLSSTALGTPE
RRKGSLADVVDTLKQRKMEELIKNEPEETPSIEKLLSKDWKDKLLAMGSGNFGEIKGTPE
SLAEKERQLMGMINQLTSLREQLLAAHDEQKKLAASQIEKQRQQMELAKQQQEQIARQQQ
QLLQQQHKINLLQQQIQVSGTFSPEKIPLFTLAAAAQQGFLLPPGFSYKAGCSDPYPVQL
IPTTMAAAAAATPGLGPLQLQQLYAAQLAAMQVSPGGKIPGIPQGNLGAAVSPTSIHTDK
STNSPPPKSKDKTTLETLTQQLAVKQSEDGKFSHAMMDFNMSGDSDGSAGVSESRIYRES
RGRGSNEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKAMTNLEKQPYY
EEQARLSKQHLEKYPDYKYKPRPKRTCLVDGKKLRIGEYKAIMRNRRQEMRQYFNVGQQA
QIPIATAGVVYPGAIAMAGMMSSSPEPGMPVIQSTYGIKGEEPHIKEEMQTDDVNGEIYD
EYDEEEDDPDADYGSDSENHIAGQAN
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccaagcgaccagcctctccgtatggggaagcagatggagaggtagccatggtg
acaagcagacagaaagtgggagaagaggagagtgacgggctcccagcctttcaccttccc
ttgcatgtgagttttcccaacaagcctcactctgaggaatttcagccagtttctctgctg
acgcaagagaactgtggccataggactcccacttctcagcacaacacaatggaagttgat
ggcaataaagtgatgtcttcatttgccccgcacaactcatctacctcacccttgaaggca
gaagaaggtgggcgtcagagtggagaatcattgtccagcacagccctgggaacccctgaa
aggcgcaaagggagcctagcggatgttgtagacacccttaagcaaagaaaaatggaagag
ctcatcaaaaatgagccagaagaaactcccagtattgaaaagctactatcaaaggactgg
aaagacaagcttcttgccatgggatcagggaactttggagaaataaaagggactccagaa
agccttgctgagaaagaaaggcagctcatgggtatgatcaatcagctgaccagtttgcga
gaacagctgctagcagctcatgatgaacagaagaaactggctgcatcacagatcgagaaa
caacgccaacaaatggaactggctaagcagcaacaagaacagattgcaagacaacagcag
cagctcctgcagcagcaacacaaaattaaccttcttcagcaacagatccaggtatctgga
acattttccccagaaaaaattccactttttaccctagcagcagctgcacagcaaggattc
cttcttcctcctggtttcagctacaaagcgggatgcagtgacccttaccccgttcagctg
atcccaactaccatggcagctgctgccgcagcaacaccaggcttaggcccactccaactg
cagcagttgtatgctgcccaacttgctgcaatgcaagtgtctccgggaggcaagatacct
ggcataccccagggtaaccttggtgctgctgtatcccctaccagcatccacacagacaag
agcacaaacagccctccacccaaaagcaaggacaaaacaacactggagaccctgactcag
caactggcagtaaaacagagcgaagacgggaagtttagccacgcaatgatggatttcaac
atgagtggagattctgacggaagtgcaggagtttcagagtctagaatttatcgggaatcc
agagggcgtggtagcaatgagccccatatcaagcgcccaatgaatgcattcatggtgtgg
gctaaagatgaacggaggaagatccttcaagccttccctgacatgcacaactccaatatc
agcaagatactaggatctcgctggaaagctatgacaaacctagagaagcagccatactat
gaggagcaggcccgactcagcaaacagcacctggagaaatacccagactacaaatacaag
ccaaggccgaagcgtacctgccttgtagatggcaagaaattacgcattggcgagtacaag
gctatcatgcgcaacagacgccaggagatgaggcagtattttaatgttgggcaacaagca
cagattcccattgccaccgcgggagtagtttacccaggagccattgccatggcagggatg
atgtccagcagcccagagcccgggatgcccgtcatccagagcacttatggcatcaaaggc
gaggagcctcatatcaaggaagagatgcagaccgatgacgtcaatggagaaatctacgat
gaatacgatgaggaagaggatgaccccgatgcggactatggcagtgacagtgaaaatcac
attgcggggcaagccaactga
DBGET
integrated database retrieval system
