Egretta garzetta (little egret): 104135246
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Entry
104135246 CDS
T05152
Symbol
POLR1A
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
egz
Egretta garzetta (little egret)
Pathway
egz03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
egz00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
104135246 (POLR1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
egz03021
]
104135246 (POLR1A)
Enzymes [BR:
egz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
104135246 (POLR1A)
Transcription machinery [BR:
egz03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
104135246 (POLR1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_1
Pox_C7_F8A
Motif
Other DBs
NCBI-GeneID:
104135246
NCBI-ProteinID:
XP_035744537
LinkDB
All DBs
Position
Unknown
AA seq
1696 aa
AA seq
DB search
MLALCVVKDVRLLPSRKLSVKPITNPQYLDNMGNPAINGLYDLALGPPDSKEVCATCMQN
FSNCPGHFGHIELPLTVYNPLFFDKLYLLIRGSCLNCHMLTCTRAVVHLLLSQLKVLEKG
LLHAVHDLEVILNRFLEQCADATGSEIEEELNRHVQEILQSHQIRDECSNVKNVCECRNK
LIAHFWKAHMSSKKCPNCKSRRSLVRKEHNSKLTVTYPSTVYHKLGEEGILDEPAAIDES
QLGKRGYLTPMTAKEYILALWKNEGFFLRYLFAGVDPHENSGFSPDMFFLDLLVVPPSRY
RPINRVGDRLFTNGQTVNLQAVMKDAKMIRKLLVFMAKEQCQPIKIAEEEIQTETGENNE
PLDHSVLTMIPGQTIADKLYNAWIRLQSHVNIVFDSDMDKLMTEKYPGIRQLLEKKEGLF
RKHMMGKRVDFAARSVICPDMYIGTNEIGIPMVFATKLTYPQPVTPWNVKELRQAVINGP
KVHPGASMVINEDGSRTVLSASSLTQREAIAKQLLTPSSGAPQSGLKIVCRHIKNGDVLL
LNRQPTLHRPSIQAHRARILPGEKVLRLHYANCKAYNADFDGDEMNAHFPQSELGRAEAY
TLAFTDEQYLVPKDGKPLPGLIQDHMISGVSMTIRGCFFTREQYMELVYRGLIDKKGRIK
IFPPAIMKPQQLWTGKQVVSTLLINIIPENHVPLNLTGKAKIGGRAWVKGPANRCPSLDS
MCESQVIIRNGELLCGVLDKAHFGSSAYGLVHCCYEIYGGETSGKVLTCLGRLFTAYLQL
YRGFTMGIEDILVKREADHKRKKIIEKSSQCGIEAVRAALNLPETASCEEVQGKWQDAHL
RKDQRDFNMVDLKFKEEVNSYNNEVNKVCMPLGLHRSFPENNLQLMVQSGAKGSTVNTMQ
ISCLLGQIELEGRRPPLMASGKSLPCFQPYDFSPSSGGFVTGRFLTGIKPSEFFFHCMAG
REGLVDTAVKTSRSGYLQRCIIKHLEGLVVQYDLTVRDSDGSVVQFLYGEDGLDIPKTQF
LQPEQFPFIAENYEVIQKTNHLDEALGRMESHQANQQFKAIKKWRARHQNSVQREGGFLM
FSQKKMASVKALIPGGEIKNGRDPATLQLLKMWYEISEKKRRKYLKKTNKCPDPSLGVWR
PDTYFASVSETFENGIEDYINKWESENRRSYTRPELSSDRLKNLLYLKWQRSLCDPGEAV
GLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMVASANIKTPMMSVPVFNT
KKALKKVKQLKKQLTRVCLAEVSLLFSESLHVKCKQNKHRLYKIKFHFLPHEYYREEKCV
KPGDILHFMETRFFKFFLEAIKRKNAKMASFTEVSTRKATRKDLDGDQDKAQNDQEAPAE
EEENIVDAEADEGDGDATEAKRKKNQEEEVDYESEEENGEENIDENLEDEEAESEKEERT
PSAEDQIGADGDESQHLSFISQTKKEKDRLLQSAELRVNAVLDSHPSIQDYTFDTENELW
CEVSLTLPLMKMYFDLSSLLVSLARSTVIHEVKGITRCLLNESTNKQGEKELVLHTEGIN
LVELFRYSDILDLNRLYSNDIHAMAKNYGIESALRVIIKEIKDVFAVYGIVVDPRHLSLV
ADYMCFEGSYKPLNRFGIQSNSSPLQQMTFETSYKFLKEATMMGAHDELRSPSACLVVGK
VVKGGTGLFDLKQPLT
NT seq
5091 nt
NT seq
+upstream
nt +downstream
nt
atgttagcattgtgtgtagtcaaggatgtaaggcttttgccatctaggaaactgagtgta
aaacccataacaaatcctcagtatttggataatatggggaatccagccattaatggattg
tacgacttggctttgggacctccagactccaaagaagtgtgtgcaacttgcatgcagaac
ttcagcaactgccctggtcattttggccatatagaactgcctctgactgtctacaacccc
ctgttttttgataaattataccttctaattcgaggttcttgtttgaactgtcacatgctg
acatgtactcgagctgtggttcacttactgctaagtcagctgaaggttctggagaaaggg
ttgcttcatgccgtccatgatcttgaagtcattctgaacaggtttttagagcaatgtgca
gatgcaacaggttcagaaattgaagaagagttaaatcgccatgttcaggaaatactccaa
agtcatcaaataagagatgagtgttcgaatgtgaaaaatgtatgcgagtgtagaaataaa
ctgatagcacatttctggaaagcacatatgagttcaaagaaatgcccaaactgcaagtct
aggagatcactagtgcgaaaagagcataacagcaagctgacagtaacctatccttctaca
gtgtaccataagttaggagaggaaggcatcctggatgagccagcagctattgatgaaagc
cagttagggaagagaggatacctgacaccaatgactgccaaggaatacatcctggctctg
tggaagaatgaaggtttctttctgcgttacctctttgctggggtggatccccatgagaat
tcaggattcagtccagacatgttttttttagatctacttgtggttccaccttcaaggtat
cgtcctataaatcgtgttggagaccgactgtttacaaatggtcagacggtgaacttgcag
gctgtcatgaaagatgccaaaatgatacggaagctcttggttttcatggcaaaagaacag
tgtcagccaataaaaattgcagaagaagaaatccaaacagagacaggagagaataatgaa
cctctggaccattctgtcctgacaatgattccaggacagaccattgcagataagctgtac
aacgcttggattcgtcttcagagccatgtcaacattgtatttgatagtgacatggacaaa
ctaatgacagaaaaataccctggtattcgtcagctattagagaaaaaggaaggactgttt
cgcaagcacatgatgggaaagcgtgtggattttgctgctcgatcagtcatttgccccgat
atgtacattggtaccaacgagattggcattcccatggtatttgctaccaaactgacttac
cctcagccagtcactccctggaatgtgaaagagctgaggcaggctgtcataaatggccca
aaggttcaccccggggcctccatggtcattaatgaagatggatctcgtacagtgttaagt
gcaagcagcctgacccagagggaagccatagctaagcagctcctcactccttcttcaggc
gcaccccagtcaggactgaagattgtatgtcgacatattaaaaatggagatgtcctttta
ctgaaccgccagcccactcttcatagaccttccatccaagctcaccgggcccgaatcctg
cctggagaaaaagtgctgaggcttcactatgccaactgcaaggcttacaatgctgatttt
gacggtgatgaaatgaacgcccattttccacagagcgagctgggtagagcagaagcctac
accttagcctttactgatgaacagtatctggttccaaaggatgggaagccacttcctggc
ttgatccaggatcacatgatttctggagtcagcatgacaatccggggctgctttttcacc
agagagcaatatatggaacttgtttaccgaggactaatagacaaaaaaggaagaattaaa
atatttcctcctgccattatgaaaccacagcaactatggacaggaaagcaggttgtttct
acattgttaataaacatcattccagaaaaccacgtcccattgaatttgactgggaaagct
aagattggtggaagagcctgggtaaagggacctgcaaacagatgtccaagtcttgactca
atgtgtgaatctcaggttattattagaaatggggaattactgtgtggagtcttggacaaa
gctcactttggcagctctgcctatggcctggtccactgttgctatgaaatctatgggggt
gaaaccagtgggaaggtgctgacatgtctaggacgcctctttactgcttatctgcagctg
tacaggggatttacaatggggattgaagatattttggttaaacgtgaagcagaccacaaa
agaaaaaagatcattgaaaagtcaagccagtgtggcattgaagctgtaagagctgctctt
aatttgccagaaacggcatcatgtgaggaggtccaagggaaatggcaagatgcccatctc
cgcaaagaccagagggattttaacatggttgatctgaaattcaaggaggaagtaaacagt
tacaacaatgaagttaacaaggtttgcatgccccttggtctccacaggagctttccagag
aacaatttgcagttgatggtacagtcaggagccaaaggatccactgtaaatacaatgcag
atttcttgtttgctgggccagattgagttggaaggtcgaagacccccattgatggcatct
ggcaaatcgctgccatgtttccagccttacgatttttcccctagctcagggggatttgtg
accggcagatttctcactgggatcaaaccttctgaattcttctttcactgcatggctggc
agggaaggtcttgtggacacagctgtcaaaaccagccgttctgggtacctacaaaggtgt
atcataaaacatttagaaggactggtagttcagtatgacctgactgtacgagatagcgat
ggcagtgtggtgcagttcctgtatggagaagatgggcttgatatccctaaaactcagttc
ttgcaacctgagcagtttcctttcattgcagaaaactatgaggtaatccagaagacaaac
catctggatgaagctttaggaaggatggagtctcaccaagctaaccagcagttcaaagcc
atcaaaaagtggcgagccaggcaccaaaactctgtgcaaagagaaggaggttttctgatg
ttttcccaaaagaaaatggcaagtgtgaaagcactgattccaggaggagaaatcaaaaat
ggaagagatcctgctactttacagttattgaagatgtggtatgaaataagtgagaagaaa
cgaagaaagtatctgaaaaagacaaataagtgtcctgaccccagccttggtgtttggcgt
ccagatacttactttgcgtctgtttcagaaacatttgaaaatggcattgaagattatatc
aacaaatgggaatctgagaacagacgaagttatacgcgcccagaactttcttctgataga
ttgaagaatttgttgtatttaaagtggcagcgatctctttgtgacccaggagaagctgtg
ggtcttcttgcagctcagagtattggggaaccttccacacagatgactctgaacaccttc
cactttgctggcagaggtgaaatgaatgtcacattgggtattccaaggttgcgggaaata
ctgatggtagccagtgcaaatattaaaacaccaatgatgagtgttcctgtgttcaatacg
aagaaagctctcaagaaggtgaaacagcttaagaaacagctcacaagagtgtgcttagct
gaggtgagcctcctattcagtgagtccctacatgtgaagtgcaagcagaacaaacatcgc
ctctacaaaatcaaattccatttcttgccccatgaatattaccgagaggagaagtgtgtg
aagcccggggacatcttgcacttcatggaaacaaggttctttaaattttttctggaagca
attaaaaggaagaatgcaaagatggcatcttttactgaagtcagcacccggaaggcaact
cggaaagatttagatggtgaccaagacaaggcacagaatgatcaggaagctccagcagag
gaagaagagaacattgttgatgcagaagctgacgaaggggatggcgatgctacagaagca
aaacggaaaaagaaccaagaagaagaggttgattatgagagtgaagaagagaatggggaa
gaaaacattgatgagaatctagaagatgaagaggctgaatcagaaaaagaagaaaggacc
cccagtgcagaagatcagattggagcagatggtgatgaatctcaacatctttcctttata
tctcaaactaaaaaagagaaagatcgattacttcaatcagcagagttgcgagtaaatgct
gttctggacagccacccatcaatacaggattacacgtttgacactgaaaatgaactttgg
tgtgaggtttcattgacacttccactgatgaagatgtactttgatctctcctccttgctt
gtctctcttgcacgaagcacagttattcatgaagtgaaggggatcacacgatgcttgttg
aatgaaagtaccaataagcaaggagagaaggaacttgttctgcatacagaagggataaac
cttgtggagttgttcagatactctgatattttggacctgaacagactttattccaatgat
attcatgccatggctaagaattatggcattgagtccgccctgagggtgattataaaggaa
ataaaagatgtatttgctgtatatggaattgtggtagaccctcggcacctttcacttgtg
gcagattacatgtgttttgaaggatcttataaaccactgaatcgttttggaattcagtcc
aactcctcccctctgcaacagatgacatttgaaaccagctacaaattcttgaaggaagca
acaatgatgggtgcccatgatgaactgcgatccccttctgcatgccttgtggttggaaaa
gttgttaaaggagggactggtttgtttgacctcaagcaacccctcacgtag
DBGET
integrated database retrieval system
