Egretta garzetta (little egret): 104135561
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Entry
104135561 CDS
T05152
Symbol
PRDM1
Name
(RefSeq) PR domain zinc finger protein 1 isoform X1
KO
K24501
PR domain zinc finger protein 1 [EC:2.1.1.-]
Organism
egz
Egretta garzetta (little egret)
Brite
KEGG Orthology (KO) [BR:
egz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
egz03000
]
104135561 (PRDM1)
Transcription factors [BR:
egz03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
104135561 (PRDM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf-C2H2
SET
Zf-C2H2_ZNF451_C
zf-C2H2_4
zf-C2H2_6
zf-C2HE
C2CH-3rd_BIRD-IDD
Motif
Other DBs
NCBI-GeneID:
104135561
NCBI-ProteinID:
XP_035744691
LinkDB
All DBs
Position
Unknown
AA seq
820 aa
AA seq
DB search
MRIKGCFLIFQAATHCRSDAVSFKNLVKGREWTMKMDMEDADMTLWTEADFEEKCTYIVN
DHPLDPSADGGTLTQAEASLPRNLTFKYASNCKEVTGVISKEYIPKGTRFGPLVGEIYTS
DTVPKNANRKYFWRIYSSGELHHFIDGFNEDKSNWMRYVNPGYSVQEQNLAACQNGMNIY
FYTIKPIPANQELLVWYCRDFAERLHYPSSRELTMMNLTQTHINPKQHSADKDELYQKSI
PKKEHSVKEILKMESNPPKGKDLFQTNISPVTPERDLDDLRKTCSPERCFFPRVVYPIRP
HIPEDYLKASLAYGMDRPSYITHSPIQTSTTPSPSGRSSPDQSLKSSSPHSSPGVTVSPL
APTSQEHREPYSYLNGSYGSEGLGSYPGYPPPGHLPSAFLPSYNPHYPKFLLPPFNMSCN
NLSALNNINGINNFNLFPRVYPLYGNLLSGGSLSHHVLNPTTLPSSLPSEGGRRLLQPDH
PRDFLIPAPNSAFSITGAAASMKDKPCSPTSGSPTAGTAASSEHIMQPKPTSVVLAATGS
EEAMNLIKSKRNVTGYKTLPYPLKKQNGKIKYECNVCSKTFGQLSNLKVHLRVHSGERPF
KCQTCNKGFTQLAHLQKHYLVHTGEKPHECQVCHKRFXXXXXXXXXXXXXXXHFQCKLCP
AKFTQFVHLKLHKRLHTRERPHKCIHCHKSYIHLCSLQVHLKGNCPVAPASGLSMEDLNR
INEEIEKFDISDNADKLEEVEDNIDLTSIVEKDILTMLRREMEGANLKVSLQRNLGNGLL
SSGCNLYESSDMSIMKLPHGHPLPLLPVKVKQETVEPMDP
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atgaggattaaaggctgttttcttattttccaggctgctacacactgtaggtcggacgct
gtgagtttcaagaatctggtgaaagggagagagtggacaatgaaaatggacatggaggat
gctgacatgactctgtggacagaagccgattttgaagagaagtgcacgtacattgtaaac
gatcacccgttggatcccagtgccgacggaggcaccctaactcaggcagaggcttccttg
ccaaggaacttgactttcaaatacgcatctaactgcaaagaggtcactggagttataagc
aaagagtacatcccaaaaggaacacgctttggacccctggtaggagagatctataccagc
gatacggttcccaagaatgcgaacagaaaatacttttggcggatctactcaagtggtgag
cttcaccacttcattgacggatttaacgaggacaagagcaactggatgcgttatgtaaac
cctggctactccgttcaggaacagaacttggctgcttgtcagaatggaatgaacatctac
ttctacaccatcaagcccatccctgccaaccaagagctgcttgtgtggtattgccgagac
tttgcagagaggctgcactatccctcctccagagagctgacaatgatgaacctcacacaa
acccacattaatccaaagcagcacagtgctgataaagatgagctctatcagaaaagcatc
ccaaagaaggagcacagtgtgaaagaaatcctgaaaatggaatccaatcctccaaaagga
aaagacttgttccagaccaacatttcaccagttactccagaaagagacttggatgatttg
cgtaagacctgtagcccggagaggtgtttcttccctcgagtcgtctacccgatccgacct
cacattccagaagactatctgaaagcttccttagcgtacgggatggacagacccagctac
attacccactcgcccatccagacgtctactacgccgagtccttccgggaggagcagccca
gaccaaagtttaaaaagttcaagccctcacagcagtccaggggtcacggtttcgcctctg
gcacctacttcccaagagcacagagagccgtactcttacttgaacggatcgtatggctca
gaaggattggggtcttatcctggatacccgccccctggccacctcccatctgcctttcta
ccatcctataacccccactaccccaaattcctgttacctccattcaatatgagctgtaat
aacctgagcgctttgaacaacatcaacggcatcaacaatttcaacctcttcccaagggtg
tatcctctttatggcaacctgctcagcggaggcagcctttcccaccacgtgttgaacccc
accacgctccccagttcgttgcccagtgaaggaggccgccgattgctgcagcctgatcat
ccgagagacttcctcataccagcacctaacagtgccttctctatcacgggcgctgctgcc
agcatgaaggacaagccatgcagccccaccagcgggtcacccacagctggcacagcggcc
agttcagaacacataatgcaaccaaaacctacctcagtggtgttggctgccaccggcagt
gaagaagccatgaatctcattaaaagtaagaggaatgtgaccggttacaaaaccctcccg
tacccactgaagaagcagaatgggaagatcaagtacgaatgcaacgtgtgctccaagacc
tttggccagctctccaatctgaaggtgcacctccgagtacacagcggagagagaccattt
aaatgccagacttgcaataaaggcttcacgcagctggctcacctccagaagcactatctg
gtacacacgggagaaaagccccacgagtgtcaggtttgtcacaaacggttcnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncatttccagtgcaagctctgcccg
gccaaattcacccagtttgtgcacctgaagctgcacaagcgtctccacacccgggaacgt
ccccataaatgcatccactgccacaagagctacattcacctctgcagcctccaggtccac
ctgaagggcaactgccccgtggcccccgcctccggcctctccatggaggacctgaaccga
atcaacgaggagatcgagaagttcgacatcagtgacaatgccgataagttggaagaagtg
gaggacaatatcgacctcacatcgattgtggagaaggatatactgaccatgctcaggagg
gaaatggaaggagccaacctgaaagtatctctacagaggaacctgggaaacggacttctc
tcctcaggatgcaacctttacgagtcgtcagatatgtcaattatgaagttgcctcacggt
cacccactacctctgttacctgtaaaggtcaagcaagaaacagttgaaccaatggaccct
taa
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