Egretta garzetta (little egret): 104135616
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Entry
104135616 CDS
T05152
Symbol
VIM
Name
(RefSeq) vimentin
KO
K07606
vimentin
Organism
egz
Egretta garzetta (little egret)
Pathway
egz04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
egz00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
104135616 (VIM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
egz03019
]
104135616 (VIM)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
egz04812
]
104135616 (VIM)
04147 Exosome [BR:
egz04147
]
104135616 (VIM)
Messenger RNA biogenesis [BR:
egz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
104135616 (VIM)
Cytoskeleton proteins [BR:
egz04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type III
104135616 (VIM)
Exosome [BR:
egz04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
104135616 (VIM)
Exosomal proteins of other cancer cells
104135616 (VIM)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Filament
FKBP15
DUF1664
TolA_bind_tri
ANG-1
DUF7491
DUF4200
Phage_scaffold
DUF4515
BLOC1_2
LAMB4
Sec10_N
RBD-FIP
TPR_MLP1_2
2_5_RNA_ligase2
T2SSF
Baculo_PEP_C
CENP-F_leu_zip
Motif
Other DBs
NCBI-GeneID:
104135616
NCBI-ProteinID:
XP_035744891
LinkDB
All DBs
Position
Unknown
AA seq
298 aa
AA seq
DB search
VGGDLGDPPFPPHPCLAPSRLQEEMLQREEAENTLQSFRQDVDNASLARLDLERKVESLQ
EEIVFLKKLHDEEIRELQAQLQEQHIQIDMDVSKPDLTAALRDVRQQYESVAAKNLQEAE
EWYKSKFADLSEAANRNNDALRQAKQEANEYRRQIQSLTCEVDALKGSNESLERQMREME
ENFAVEAANYQDTIGRLQDEIQNMKEEMARHLREYQDLLNVKMALDIEIATYRKLLEGEE
SRINMPIPTFASLNLRETNIESQPMVDTHSKRTLLIKTVETRDGQVINETSQHHDDLE
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
gttgggggggatctgggggaccctccgttccctcctcacccctgtctcgccccttccagg
ctgcaggaggagatgcttcagagggaggaggccgagaacaccctgcagtccttcagacag
gatgttgacaatgcctctctggcacgtctggatcttgagcgcaaagttgagtctctgcaa
gaggagattgtcttcttgaagaagcttcatgatgaggaaatccgagaactgcaggcccag
ctccaggaacagcacatccaaattgatatggatgtttctaagcctgatcttactgctgcc
ctgcgtgacgttcgccaacagtacgaaagtgttgctgctaagaatcttcaggaagctgaa
gagtggtacaagtccaaatttgcagatctctctgaagctgctaataggaacaacgatgcc
ctgcgccaggccaaacaagaagctaatgaataccgcagacagattcagtctctcacctgt
gaagttgatgcccttaagggaagcaacgaatccctggagcgccagatgcgtgaaatggag
gaaaattttgctgttgaagctgctaactaccaagacactattggccgtctgcaggatgag
attcagaacatgaaggaagaaatggctcgccatctccgtgagtaccaggacctgctgaat
gtaaagatggctcttgatattgagattgccacctacagaaaactgctggagggtgaagag
agcaggattaacatgcctattccaacctttgcttctttgaacctgagagaaaccaacatt
gagtctcagccaatggttgacactcactcaaagaggacacttctaattaagaccgttgaa
actagagatggacaggttattaatgaaacttcccagcatcacgatgacttggagtaa
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