Egretta garzetta (little egret): 104135731
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Entry
104135731 CDS
T05152
Symbol
PCDH1
Name
(RefSeq) protocadherin-1
KO
K16498
protocadherin delta 1
Organism
egz
Egretta garzetta (little egret)
Pathway
egz03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
egz00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
104135731 (PCDH1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
egz01009
]
104135731 (PCDH1)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
egz04515
]
104135731 (PCDH1)
Protein phosphatases and associated proteins [BR:
egz01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
104135731 (PCDH1)
Cell adhesion molecules [BR:
egz04515
]
Cadherins
Protocadherins
104135731 (PCDH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
K319L-like_PKD
TMEM154
Cadherin_4
MLANA
Mid2
Syndecan
EphA2_TM
Adeno_E3_CR2
Motif
Other DBs
NCBI-GeneID:
104135731
NCBI-ProteinID:
XP_009647710
LinkDB
All DBs
Position
Unknown
AA seq
831 aa
AA seq
DB search
MVRRLLRLDRTTGLITVQGPIDREDVNILKFSVMAKDKGANPKSARTQVVVTIKDMNDNA
PSIEIRGIGLVTHQDGMANISEDVPVETAVALVQVSDRDEGENAVVTCVVAGDVPFQLRQ
ASETGSDSKKKYFLQTTTPLDYESVKEYTIEIVAVDSGTPPLSSTNSLKVQVVDVNDNAP
VFSQSFTEVAFPENNEPDDLVMEVSASDADSGSNAKLVYSLVTDPSSKGSFTIDPDSGEI
RVKAVLDREQRERYEFLVVAADKGSPSLKGTASVAINVMDRNDNDPKFMLSGYNFSVMEN
MPPLSPVGMVTVIDADKGENARIQLSVEQDNGDFVIQNGTGTILSSISFDREQQSTYTFR
LKAVDGGDPPRSAYVGVTINVLDENDNAPFITSPSNATYKHILPHTSPGQQVSKVKAEDI
DSGVNAELTYSITGGNPFELFQISPHSGDITLEKEILRKHHGLHRLVVRVNDKGKPSRHG
TALVHFYVNETLANRTLLDTLVGHSLDTPLDIDIAGDPEYERSKQRSNILFGVIAGIVAV
TLVIVLVILVRYCRQREAKSGYQAGKKETKDLYAPKQASKSGKSKSKVKKSKSPKPPKPT
EDEEETGLQKSLKFNLMNDSVSDSPRIHLPLPHRRVTFSAASQAQDLQDPSQHSYYDSGL
EESETPSSKSSSGPRIGPLALPEDHYERTTPDGSIGEMEHPENDLRPLPDVAMTGTCTRE
CTEFGHSDTCWMPGQSSPSRRPKNALKLSTFVPYQDRGSQEQVGNGSPRLSEERSTKMAN
LRLLPTYSAFSNSSHEPCKDSPMEEIPLTQTSDFQPATTPSSQTTKREIYL
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atggtgcgccggctgctgcgcctggaccgcaccacggggctcatcaccgtgcaggggccc
attgaccgcgaggacgtcaacatcctcaagttctctgtcatggccaaggacaagggggcc
aaccccaagagcgcccgcacccaggtggtggtcaccatcaaggacatgaatgacaacgcg
ccctccatagagatacggggcattgggcttgtgacccaccaggatggcatggcgaacatc
tcggaggacgtgccagtagagacagcagtggctctggtgcaggtgtccgaccgagatgag
ggcgaaaacgccgtggtgacctgcgtggtggctggtgacgtcccgttccagctgcggcag
gctagcgaaacggggagcgacagcaagaagaaatacttcctgcagaccaccacgccgctg
gactacgagtcagtgaaggagtacacgatcgagattgtggcggtggactcggggaccccc
cccctctccagcaccaactctttgaaggtgcaggtggtggatgtgaatgacaacgcgccc
gtcttcagccagagcttcaccgaggtggccttccctgagaacaacgagcccgacgacctg
gtgatggaggtgagcgccagcgatgctgacagtggctccaacgccaagctggtttactcc
ttggtgacagacccctcctccaagggctccttcaccattgaccccgactccggggagatc
cgggtgaaggcggtgctggaccgagagcagcgggagcgctacgagttcttggtggtggca
gcagacaagggcagccccagcctgaagggcacagcgtctgtggccatcaacgtcatggac
aggaatgacaacgaccccaagttcatgctgagcggctacaacttctcggtgatggagaac
atgccacccctcagccctgtgggcatggtgacggtgatcgatgctgacaaaggagaaaac
gcccgcatccagctgtcggtggagcaagacaatggggattttgtcatccagaacggcacc
ggcaccatcctctccagcatctcttttgaccgggagcagcagagcacgtacacgttccgc
ctcaaggcggtggacggtggggatcctcccaggtctgcctacgtgggggtgaccatcaac
gtcttggatgagaatgataatgcccccttcatcacttcgccctccaatgccacctacaaa
cacatcctgccccacaccagccctggccagcaggtgagcaaggtcaaggcggaggacatc
gactctggtgtcaacgcagagctgacctacagcatcacaggaggcaaccccttcgagctc
ttccagatctccccgcacagtggagacatcaccctggagaaggagatcctgcgcaagcac
cacggcctgcaccgcttggttgtgcgcgtcaacgacaagggcaagccctcacggcatggc
acggcgctggtgcacttctacgtcaacgagacgctggccaaccgcacgctgctggacacg
ctggtggggcacagcctggacacgccgcttgacatagacatcgccggagaccccgaatac
gagcgcagcaagcagcggagcaacatcctctttggagtcatcgctggcatcgtggccgtc
accctggtcatcgtgctggtcatcctggtgcgctactgccggcagcgggaggccaagagc
ggctaccaggcaggcaagaaggagaccaaggacctgtacgcacccaagcaggccagcaag
agcggcaagagcaagagcaaggtgaagaagagcaagtccccgaagccgcccaagcccacg
gaggatgaggaggagacggggctgcagaaatcgctcaagttcaacctcatgaacgactct
gtcagcgacagcccccgaatccacctccccttacctcatcgccgagtgacattctctgca
gccagccaggctcaggacctgcaggatccctcccagcacagctactatgacagtgggctg
gaggagtcagagacccccagcagcaaatcgtcgtcggggccccgcatcgggccgctagcc
ctgcctgaggatcactatgaacgcaccacgcccgacggcagcatcggggagatggagcac
cctgagaacgatctccggcccctgcccgatgtagccatgactgggacctgtacccgggag
tgcacagaatttggccactccgatacctgctggatgcccggccagtcctcccccagccgc
aggcccaagaacgccctcaaactctccacttttgtgccttaccaagacagagggagtcaa
gagcaagtcgggaatggcagccccagactctcagaagagcgcagcaccaaaatggccaac
ctccgcctgctccccacgtacagtgccttctccaatagtagccatgagccctgcaaggac
tctcccatggaggaaattcctctcacccagacctcggacttccagccagccaccaccccc
tcgtcccagaccaccaagagggagatttacctgtga
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