Egretta garzetta (little egret): 104135773
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Entry
104135773 CDS
T05152
Symbol
UPF2
Name
(RefSeq) regulator of nonsense transcripts 2 isoform X3
KO
K14327
regulator of nonsense transcripts 2
Organism
egz
Egretta garzetta (little egret)
Pathway
egz03013
Nucleocytoplasmic transport
egz03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
egz00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104135773 (UPF2)
03015 mRNA surveillance pathway
104135773 (UPF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
egz03019
]
104135773 (UPF2)
Messenger RNA biogenesis [BR:
egz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
104135773 (UPF2)
mRNA cycle factors
P-body specific factors
104135773 (UPF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G
Upf2
Motif
Other DBs
NCBI-GeneID:
104135773
NCBI-ProteinID:
XP_009647750
LinkDB
All DBs
Position
Unknown
AA seq
1289 aa
AA seq
DB search
MINIFYESLASLRTCLGNTMPAERKKPANMEEKESPLNNKEKEFSERRPVSTREKPKEDV
KVGMKRETLKVPEDKKKKLEEDKRKKEDKERKKKEEDKVKAEEEQKKKEEEEKKKLEEEE
KKKQEEEEKKKQEEAAAQLKEKEEAHQLHQEAWERHQARKELRSKNQNAPDNRPEENFFS
RLDSSLKKNTAFVKKLKTITEQQRDSLSHDFNSLNLSKYIAEAVASIVEAKLKISDVNCA
VHLCSLFHQRYADFAPSLLQAWKKHFEARKEEKTPNITKLRTDLRFIAELTIVGIFTDKE
GLSLIYEQLKNIINADRESHTHVSVVISFCRHCGDDIAGLVPRKVKTVAEKFNLGFPPSE
IISPEKQQPFQNLLKEYFTSLTKHLKRDHRELQNIERQNRRILHSKGELSEDRHKQYEEF
AMSYQKLLANSQSLADLLDENMPDLPQEKPTPEEHGPGIDIFTPGKPGEYDLEGGIWEDE
DARNFYENLIDLKAFVPAILFKDNEKCSQNKDSGKDESRDSKDAKDNKEAPGSEDLELEL
ENLDINDDPLELDCGDEAEDLTKKLLDEQEQEDEEASTGSHLKLIVDAFLQQLPNCVNRD
LIDKAAMDFCMNMNTKANRRKLVRALFIVPRQRLDLLPFYARLVATLHPCMSDVAEDLCS
MLKGDFRFHVRKKDQINIETKNKTVRFIGELTKFKMFSKNDTLHCLKMLLSDFSHHHIEM
ACTLLETCGRFLFRSPESHLRTSVLLEQMMRKKQAMHLDARYVTMVENAYYYCNPPPAEK
TVKKKRPPLQEYIRKLLYKDLSKVTTEKVLRQMRKLPWQDAEVKDYVICCMINIWNVKYN
SIHCVANLLAGLVLYQEDVGIHVVDGVLEDIRLGMEVNQPKFNQRRISSAKFLGELYNYR
MVESAVIFRTLYSFTSFGVNPDGSPSPLDPPEHLFRIRLVCTILDTCGQYFDRGSSKRKL
DCFLVYFQRYVWWKKSLDVWTKDHPFPIDIDYMISDTLELLRPKIKLCNSLEEAIRQVQD
LEREFLIKLGIVNDKDSKDSITEGENLEEDEEEEEGGAETEEQSGNESEVNEPEEEEGSD
NEEEGEEEEEENTDYLTDSNKENETDEENTEVMIKGGGLKHVPCAEDEDFIQALDKMMLE
NLQQRSGESVKVHQLDVAIPLHLKSQLKKGPPLGGGEGESESGDTMPFVMLTRKGNKQQF
KILNVPMSSQLAANHWNQQQAEQEERMRMKKLTLDINERQEQEDYQEMLQSLAQRPAPAN
TNRERRPRYQHPKGAPNADLIFKTGGRRR
NT seq
3870 nt
NT seq
+upstream
nt +downstream
nt
atgataaatatcttttacgaatctttggcttccttgagaacttgcctgggtaacacaatg
ccagctgagcgcaagaagccagcaaatatggaagaaaaagaatctccgttaaataataaa
gaaaaagaatttagtgaaaggcgaccagtgagcaccagggaaaagccaaaagaagatgtc
aaggttggcatgaagagagagactttaaaggttcctgaagataaaaagaaaaaactggaa
gaggataaaaggaaaaaagaagacaaggagcggaagaaaaaagaagaggataaagtaaag
gcagaagaagagcaaaagaaaaaagaagaggaagaaaaaaagaaacttgaagaagaggaa
aaaaagaaacaagaggaggaagagaaaaagaaacaagaagaagcagctgctcaactgaaa
gaaaaagaggaagcacatcagctccatcaggaggcttgggagcgccatcaggcaagaaaa
gagcttcgcagcaaaaaccagaatgcaccagacaatcgccctgaggaaaacttcttcagc
agactagattccagtttgaagaagaacacagcttttgttaaaaagttaaaaaccattaca
gagcaacaaagggactccttgtcccatgactttaatagcctgaatttaagcaaatacatt
gcagaagcagtagcttctattgtggaagccaaactgaaaatatcagatgtgaactgcgct
gtgcacttgtgttccctcttccaccagcgctatgctgattttgccccttcgttacttcag
gcttggaaaaaacattttgaagccaggaaagaagagaagacccccaacattaccaagtta
agaactgatttgcgtttcattgcagaattgacaatagttgggattttcactgacaaggaa
ggtctgtctttaatctatgagcagcttaaaaatattattaacgctgatcgagaatcccac
actcatgtttctgtggttatcagcttttgtcggcactgtggagacgacattgctggtttg
gtaccaaggaaagtaaaaactgttgcagagaagtttaacttgggctttcctcctagtgag
ataattagcccagagaaacagcagcccttccagaatttgttgaaggaatactttacgtct
ttgaccaaacatctgaaaagggaccacagggagctacaaaatattgaaagacaaaacagg
cgcattcttcactccaaaggagagctgagtgaagatcgacacaagcaatatgaggaattt
gcaatgtcctatcagaagctgttggcaaattctcaatctcttgctgatcttttggatgaa
aacatgcctgaccttcctcaagagaaaccaacacctgaggaacatggacctggtattgat
attttcacaccaggaaagcctggagagtatgacctggaggggggtatctgggaagacgaa
gatgctagaaacttctatgagaatctcatcgacttaaaggcttttgtgccagcaattttg
ttcaaagacaatgaaaaatgttcccagaataaggattccggcaaagatgaatcaagagat
tcaaaagatgccaaagataataaggaagcacctgggagtgaggatttggagttggagctg
gagaacctggatattaatgatgatcctctggagttagactgtggagatgaggcagaagac
cttacaaaaaagcttcttgatgaacaagaacaagaggatgaagaagccagtacgggatct
catttaaaacttatagtagacgcttttcttcagcagcttcccaattgtgtcaacagagac
ctcatagacaaggcagcaatggatttttgcatgaacatgaatacaaaagccaacagaaga
aagttagtacgagcacttttcatagttcctagacaaaggttggatttgctaccgttttat
gcaaggctggttgccacattgcatccctgtatgtctgatgtagcagaggatctttgttcc
atgctgaaaggggatttcagatttcatgtaagaaaaaaggaccagatcaacattgaaaca
aagaataaaactgtgagatttattggtgagcttacaaagtttaagatgttctccaaaaat
gatactctccactgtttaaagatgcttctgtcagacttttctcatcaccatattgaaatg
gcatgtactctgctggaaacctgtggaagatttctctttagatcaccagaatctcactta
agaactagtgttcttttggaacaaatgatgagaaaaaagcaagcaatgcatcttgatgca
cgctatgttacaatggtagaaaatgcttattactactgtaatccccctccagctgaaaaa
actgtgaagaaaaaacgtcctcctttgcaggaatatattcgtaagctgctttataaggat
ctgtccaaggtcaccacagagaaggtcctgagacagatgcgcaagctgccttggcaggat
gcagaagtaaaagactatgttatatgctgtatgatcaacatctggaatgtgaaatacaat
agtattcactgtgtagccaacctcttagcagggctggtcctttaccaggaagatgttgga
attcatgttgtggatggagtgctagaggatattcgactaggaatggaggttaaccagccg
aagtttaaccaacggcggatcagcagtgccaaatttttgggggagctttacaattatcga
atggtggaatcagctgtaatatttcgaactctgtattctttcacatcatttggtgtgaac
cctgatggtagtcctagtccactggaccctccagaacatcttttcagaatcagattagtt
tgtactatcctcgatacctgtgggcaatattttgacagaggatccagcaaacgaaaactc
gattgcttccttgtatattttcagcggtatgtttggtggaaaaaaagtctggatgtttgg
acaaaagaccacccatttcctatagacatagactatatgatcagcgatacactggaactg
ctgagaccaaagataaagctctgcaattccctggaagaagctatcagacaggtgcaagac
ttggaaagagaattcttaataaaattaggaattgtgaatgacaaagattccaaagattcc
attacggaaggagagaatctagaagaggatgaagaggaggaggaaggtggagcagagaca
gaggaacaatctggaaatgaaagtgaagtaaatgagccagaagaagaggagggctctgac
aatgaggaagaaggtgaagaggaggaggaagaaaacacagattatcttacagactccaat
aaagaaaatgaaactgatgaggagaatacagaagtaatgattaaaggaggaggacttaag
catgtcccttgtgcagaagatgaggacttcattcaggcgttggataaaatgatgctggaa
aatcttcagcaacggagtggtgaatctgttaaagtacatcagttggatgttgctattcct
ctacacctcaaaagtcagctcaagaagggtcccccgcttggaggtggggaaggagagtca
gagtctggagacacaatgccatttgtcatgttaacacgaaaaggcaacaaacagcagttt
aagatcctaaatgtaccaatgtcttcccaacttgctgcaaaccattggaaccaacagcaa
gctgaacaggaggagagaatgaggatgaaaaagctcactttggatatcaatgaacggcaa
gaacaagaggactaccaggaaatgttgcagtccctggcacagcgtcccgctccagccaat
actaatcgtgaacggcggcctcgttaccagcatccgaagggagcacctaatgcagatcta
atctttaaaactggtgggaggagacgctga
DBGET
integrated database retrieval system
