Egretta garzetta (little egret): 104135905
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Entry
104135905 CDS
T05152
Name
(RefSeq) SWI/SNF complex subunit SMARCC1 isoform X2
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
egz
Egretta garzetta (little egret)
Pathway
egz03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
egz00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
104135905
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
egz03021
]
104135905
03036 Chromosome and associated proteins [BR:
egz03036
]
104135905
Transcription machinery [BR:
egz03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
104135905
Chromosome and associated proteins [BR:
egz03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
104135905
PBAF complex
104135905
GBAF(ncBAF) complex
104135905
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_3
SWIRM
SWIRM-assoc_2
Myb_DNA-binding
Myb_DNA-bind_6
BRCT_2
Chromo
SpeFL
Motif
Other DBs
NCBI-GeneID:
104135905
NCBI-ProteinID:
XP_009647895
LinkDB
All DBs
Position
Unknown
AA seq
689 aa
AA seq
DB search
MDFKAGGTLCHILGAAYKYKNEQGWRRFDLQNPSRMDRNVEMFMNIEKTLVQNNCLSRPT
IYLIPDIELKLANKLKDIVKRHQGTVTEEKSKATHHVYPSPTSMDDDEWLRPVMKKDKQV
LVHWGFFPDSYDTWVHANEIDAEIEDPPIPEKPWKVHAKWILDTDVFNEWMNEEDYEVDE
NRKSVSFRQRISMKNEEPVRSPERRDRKAAASTRKRKHSPSPPPTPVESRKKTGKKGQAA
LYGKRRGQKEEDEQEDLTKDMEDPTPVPNIEEVVLPKNVNPKKDSENTPVKGGTVADLDE
QDEETVATGGKEDEDPNKGDQSRSIDPGEDNVTEQTNHIIIPSYASWFDYNCIHVIERRA
LPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLTGDVCAVMRVHAFLE
QWGLINYQVDPESRPMAMGPPPTPHFNVLADTPSGLMPLHIRTPQVPAAQQMLSFPEKNK
EKPTDLQNFGLRTDIYSKKTLAKSKGASAGREWTEQETLLLLEALEMYKDDWNKVSEHVG
SRTQDECILHFLRLPIEDPYLENSDASLGPLAYQPVPFSQSGNPVMSTVAFLASVVDPRV
ASAAAKAALEEFSRVREEVPLELVEAHVKKVQEAARASGKVDPTYGLESSCIAGTGPDEP
EKIGRLSSKMQKSLQIRFLKHFLLNHNNP
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atggatttcaaagctggaggtacattatgtcacattcttggtgctgcttacaaatataag
aatgaacagggctggcggaggtttgacctgcagaatccatcccgaatggaccgaaatgtg
gagatgttcatgaacattgagaaaacactagtgcagaacaattgtctgagcagaccgacc
atctacctcattccagatatagaattgaagttggctaataaattgaaggatattgtcaaa
cgtcaccagggaacagtaactgaagagaaatcaaaggctacccaccatgtttatccaagt
cctacctcaatggatgacgatgaatggttgagacctgtgatgaaaaaagacaagcaggtg
ctggtacactggggcttttttccagacagctatgacacttgggttcatgccaatgaaata
gatgctgaaattgaggatcctccaattcctgaaaagccatggaaggttcacgccaagtgg
attttggacacagatgtattcaatgaatggatgaatgaagaggattatgaggtagatgag
aacaggaaatcagtgagttttcgacagagaatctccatgaaaaatgaagagcccgtacgt
agtccggagaggagagacaggaaagcagcagcaagtacaaggaagcgaaagcattctcct
tctccaccccccactcctgtggagtcgagaaaaaagacagggaaaaaaggacaagcagcc
ttatacgggaaaaggagagggcagaaagaagaagacgagcaagaagatcttacaaaggac
atggaggatcccacaccagtacctaatatagaagaagtggtacttcccaaaaatgtgaac
ccaaagaaagacagcgaaaacacgcctgtgaaaggaggaacggtggcagacctcgatgag
caggatgaggagacagtggcaactggaggaaaggaagatgaagatcccaacaaaggcgat
caaagccgttcgattgatccaggtgaagataacgtcacagaacaaaccaaccacatcatt
attccaagctatgcatcttggttcgactacaactgtatccatgtgatcgaacgtcgtgct
cttccggaattcttcaatggaaaaaacaagtccaagactccagaaatatacctggcgtac
cgcaacttcatgattgacacctatcgcttaaaccctcaagagtacttgaccagcactgcc
tgccgaaggaatctgactggagacgtgtgtgctgtcatgagagtacatgcttttctggag
cagtggggtctcattaactaccaagtggatccagaaagccgtcccatggccatgggacct
ccgcctactcctcacttcaatgtgctggctgacacaccctctggacttatgcctctccac
atccgcactccgcaggttccagctgctcagcagatgttgagttttcctgagaaaaacaaa
gagaagcctactgatctgcagaactttgggcttcgcacagacatttactcaaaaaagact
ttggcaaagagtaaaggtgcaagtgctggaagagaatggacagaacaagagacactgctg
ctattagaagctctggagatgtacaaagacgactggaacaaagtctccgagcacgttggg
agccgtacccaagacgagtgcattctccattttctgagacttcctatcgaagacccctat
ttggagaactccgatgcgtctctgggcccgctggcctaccagcccgtacctttcagccag
tctggcaatcccgtgatgagcaccgttgcttttctggcgtcggtggtggatccccgggtg
gcatcagccgcagcaaaggctgcgttagaggagttttctcgagtcagagaggaggtacca
ctggagctcgttgaagctcatgtaaagaaagtgcaggaagcagcaagagcctctgggaag
gtggatccaacgtacgggctggagagcagctgcattgccggaacggggccagatgagccg
gagaaaatcggtaggctgtccagcaaaatgcagaaatctctgcagataaggtttcttaag
cattttcttctgaatcataataacccttaa
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