Egretta garzetta (little egret): 118452021 Help Entry 118452021         CDS       T05152                                  Name (RefSeq) collagen alpha-1(I) chain-like   KO K19721   collagen type V/XI/XXIV/XXVII, alpha Organism egz  Egretta garzetta (little egret) Pathway egz04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:egz00001]  09140 Cellular Processes   09142 Cell motility    04820 Cytoskeleton in muscle cells     118452021  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:egz00536]     118452021 Glycosaminoglycan binding proteins [BR:egz00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    118452021 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Collagen COLFI Laminin_G_2 Motif Other DBs NCBI-GeneID:  118452021 NCBI-ProteinID:  XP_035747774 LinkDB All DBs Position Unknown AA seq 1803 aa AA seqDB search MAKPFKVAYEVNLLDKIISHAQDLSNVSFSYDEANCSILEIGQYATLNMPTREAFGDRFA DELSVLMKLRYSLKEDTSLVTILSHRSHVLFQIRINPYALVFVTTRRRHYEFPVSLLGDG HWHQVALSISLERLELHVDCRLVDRVSWSNYFGMGVNTEGLIIVGGLIESFEIPFKGALQ QLTFVMGDPAAAGEHCCSYNSTCTHAFNLSRFDSPGEPSRAWPEDSRSTDSDLTLGAPWT WKDAQETLNLQPDGSTLTSFSATDMPSAEEEEGSLSIEDEGFELVNSTYNKITGPGRPGL GRSSSWVTGSSGEAAKKERASDPWEENVTMEKLTGDAGTRRRLLPNKPSDAITDLDVPAE RASDPWEENVTMEKLTGDAGTRRRLLPNKPSDAITDLDVPAAFTKDSPSSRQAGSPEGSM PKGLLVMGSAAGLPEHPPVAASPAVPGLRDSTAHLGHPISPLARRQQGHVKPGPPGLPGP PGLPGCPGRRGLVGPKGDKGYPGAMGQTGPPGDPGPAGIPGVPTVVLWRNSREDWQTFTQ SSFYQLLHAGWPRKPGAPGPPGHPGRTGAPGPCGDPGEPGEKGQRGYAGEPGLQGLPGRA GYPGSDGFPGLDGKPGPWGLPGEQGLQGFQGDRGLAGEKGEEGFLGDPGPAGEKGEKGVK GVKGENGLPGPAGLQGMSGPKGVTGFQGPVGLEGEGGSVGPPGPAGPMGEPGQPGSVGHQ GVNGSQGEMGPPGLPGPQGPKGPQGLQGRRGPPGPRGTQGPAGMEGSAGPKGDTGADGAP GLRGQPGQEGPGGFIGLPGSKGTQGERGCRGPGGAKGELGAKGDKGLRGTQGAKGPPGIR GQVGLQGFPGPRGAAGPQGPDGEEGQIGPAGLNSSVGPKGGRGPDGPKGTPGPRGARGRV GQRGLVGVPGLPGLRGIPGAEGAEGKPGTQGPPGTMGSPGRRGPLGFAGLQGAHGHAGPP GSIGSLGKPGPDGDPGSLGPKGLPGKPGSEGPQGPVGTYGYPGPAGDRGRPGRRGDKGEA GAQGPPGFPGKAGPKALPGPPGPRGAPGSQGRAGDPGPRGLPGMPGVRGTRGLDGSPGKP GSAGEMGAPGMAGAAGPPGYPGREGPNGPEGPLGVRGEKGDAGDPGEAGISGLDGEQGPP GPPGAEGQLGPKGEQGEAGPCGALGIRGVPGEPGDDGPEGPPGRPGEQGKEGDAGDAGDP GEQGPQGQKQGDAGPRGLPGMPGPGAATGEIGEKGHKGEKGQEGLLGQVGVTGAAGPAGA RGQFGGTGLRGPPGLDGPEGAKGDPGPRGMDGPTGAAGLEGLAGDDGAKGDGGKPGPAGA AGARGPVGAPGLWGYTGHEGARGATGAKGEPGRQGPLGPPGEAGATGLSGTEGLAGAKGE LGKPGKPGQMGSPGQAGPKGRKGRKGEKGDVGSEGEEGVPGETGRRGKRGKVGHRPPRGP QGPKGYPGDEGPEGPQGPQGPYGIPGLKGMKGEPGPKGHKGEKGSMGNLGQQGDDGFKGK PGPHGVPGRPGPKGQQGDTGPPGLRGHPGFPGTPGLKGFPGLPGPRGMPGMPGLAGPPGP RGAPLMLSREELRHLIYSSNHLNYTAVWALLDTLSQELQALVEHPNGTRTNPAATCKELL LAHPSLPDGQYYIDPNQGSPQDALVAFCNFTAGGETCIAPIHNQVPIKAWLSTYTSEDTF EWFSTLPGGFLLEYVGASPVQLRFLRLHSHLATQKVSYSCRPALEQGQPQPEKEIRFLAD SREQSYAASLQGCMLDNESSITDTIFQFATEELSLLPLRDLAVFHNGDTSHQFGFTVGPV CFS NT seq 5412 nt NT seq  +upstreamnt  +downstreamnt atggcgaaacccttcaaggtggcgtatgaagtgaacttgctggacaaaattatttcccat gcgcaggacctcagcaatgtttccttcagctatgatgaagccaactgcagcatcctggag atcgggcagtacgctaccctcaacatgcccacgagggaggcctttggggacaggtttgca gatgagctgagcgtgctcatgaagctcaggtactcgctgaaggaggacaccagcctagtg accatccttagccatcgcagccacgtgcttttccagatcaggattaacccatatgccttg gtctttgtcaccacgaggaggagacactatgagttcccagtttcccttctcggcgatggg cactggcaccaagttgctctcagcatctccttggagaggctggaattgcacgtggactgt cggctggtggacagggtgagctggtccaattactttgggatgggagtgaacactgagggg ctgatcatcgtcggaggcctgatcgagtccttcgagatcccctttaagggtgctctgcag caactgaccttcgtgatgggagacccagcagccgccggcgagcactgctgcagctacaac tcaacctgcacgcacgccttcaacctcagccgcttcgattccccgggggagccttcacga gcctggccagaggactccagatccactgattcggatttgaccctgggggcaccttggacg tggaaggatgcccaggagaccctcaacctccagcctgatgggagcaccctgacttcattc tctgctactgacatgccgtcagctgaggaggaggagggcagtctttctattgaggatgaa ggctttgagctggtgaactccacctataataaaatcactggccccggcaggccagggctt ggcaggagcagctcgtgggtcactggtagctccggtgaagcagccaagaaggagcgtgcc tccgacccctgggaggagaatgtcaccatggagaagctgacgggtgatgcgggcacccgg cggcggctcttgcccaacaaacccagcgatgccatcactgacctggacgtgcctgccgag cgtgcctccgacccctgggaggagaatgtcaccatggagaagctgacgggtgatgcgggc acccggcggcggctcttgcccaacaaacccagcgatgccatcactgacctggacgtgcct gccgccttcaccaaggactccccatcgtcgcgtcaggcaggcagccctgaaggaagcatg cccaaaggtctcctggtgatggggtcagcggcgggcctcccggagcatcctccagtagca gccagcccggctgtcccagggctcagggacagcactgcccacctgggacaccccatctca ccgttggcacgcaggcagcagggtcacgtgaagccaggaccaccggggctgccgggacca ccggggctgccgggctgtcctgggagacgtggactggtgggacccaaaggagacaaaggg taccctggagccatggggcagacgggccccccgggtgacccaggccctgcgggcatccct ggtgtccccaccgtcgtcctctggaggaactccagggaggactggcagacattcacgcag tcatcgttttaccagcttctacacgcaggctggccgagaaaacccggagcccctgggccc ccaggacatccagggagaacaggagcccctggaccctgcggagatccgggagagccgggc gagaaaggccagcgggggtacgcgggtgaacccgggctccagggtttgccaggacgtgcg ggttaccctggctcagatggcttccctggcctggatggcaaacctggtccatgggggctg ccgggagagcagggactgcagggcttccagggtgaccgggggctggctggtgagaaggga gaagagggtttcttgggtgaccctggaccagctggggagaaaggagagaagggagtgaag ggggtgaagggagaaaatggcctgccaggtcccgctgggcttcaggggatgtcaggtccg aagggtgtgacgggcttccaaggccccgtggggctggagggagaaggtggctcagtgggt cccccgggccctgccggccccatgggagagccgggccagccgggatccgtcggacaccaa ggtgtcaatggctctcagggagaaatgggccctcctggcttgcctggcccccagggcccc aagggaccgcagggcttgcagggcagacgcggcccccctggcccccggggcacacagggt ccagctgggatggagggatccgctggtcccaaaggagacaccggcgcagatggtgcccct gggctgaggggacagccaggacaggagggccctggggggtttattggcctgccaggttca aaaggcacccaaggggagcggggctgtcgaggtccgggtggagccaaaggagagctggga gccaaaggagacaagggtctacgcggaacacaaggagccaaagggcccccagggattcga ggccaggttggcttgcagggctttcctggaccccgtggagcagcggggccccagggacct gatggggaagaaggccagatcggcccagcggggctgaacagcagtgtgggacccaaggga ggccgaggacctgacggcccgaagggaactccaggaccgcggggagcccggggccgtgtg ggtcagcgtgggctggtcggggtccctgggctgcccggcttgcggggcatcccgggagca gaaggcgcagaaggaaagcctggtacacagggtcccccagggaccatgggcagcccaggc aggaggggaccactgggctttgccggcttgcagggggcccacgggcacgcaggacctcct ggatcgataggctctctgggaaaacctggacctgatggagacccgggttccctgggccca aaggggctgccagggaagcctggctcggaggggccacaaggacctgtcggcacttacggc tacccaggacctgccggtgaccgtgggaggccggggcgcaggggggacaagggagaagca ggagcccaaggtccaccgggatttccaggaaaagctggtcccaaggccctgccaggtccc cccggtccacgaggtgctcccggctcccagggcagagcaggagacccgggtcctcgaggg cttccagggatgcctggtgttcgtggcacgcgagggctggatggcagccccgggaagcct ggctcggcaggagaaatgggggctcctggcatggctggtgctgctggcccacctgggtac ccgggacgggaaggtccaaatggacctgaagggcctttgggagtgagaggagagaagggg gatgcgggagatcctggggaagccggcatcagcgggctggatggcgagcaggggccaccg ggaccgccaggagcagagggtcagctggggcccaaaggcgagcagggagaggcaggaccc tgcggagctctgggcatcagaggggtccctggggagccaggggacgatggaccagagggg ccaccggggaggcccggggagcaagggaaggagggtgatgctggtgatgctggagacccg ggtgagcaaggaccacaagggcagaagcagggtgatgctggccccaggggccttcctgga atgcctggcccgggagctgctacaggggaaattggagaaaaaggccataaaggagagaag ggccaagaaggtttgctgggccaggtcggtgtcactggagctgcgggacctgctggagcc agaggacagtttggtgggacgggtctccgaggtcctcctgggcttgacggtcccgaggga gcgaagggagatccagggccacgaggcatggatggacccactggtgctgcaggattagag ggactcgctggagacgacggagccaagggagatggtggcaagcccggtccagcgggcgca gcgggtgcccgggggccagtgggtgcccctgggctctggggctacaccgggcacgaagga gccagaggagcaacgggggccaagggagagccgggccggcagggtcctctcgggccaccg ggtgaagctggagccacgggactgagcggcaccgagggcctggcgggtgcaaaaggggag ctgggcaagccgggaaaaccagggcaaatggggtctccgggacaagctggtcctaaaggg cggaaaggtcgcaaaggagaaaagggcgatgtggggagtgaaggggaagaaggggtccct ggagaaactggcagacggggcaagcgaggcaaggtgggccaccggcccccgagaggcccc cagggacccaagggctacccaggtgacgaggggcccgaaggaccccagggcccccaagga ccctatggcatcccagggctgaagggcatgaaaggagaacctggaccgaaaggacacaag ggcgagaagggcagcatgggcaacctgggccagcaaggggacgatggcttcaagggcaag ccaggaccccatggtgtccctgggaggccaggacccaagggacagcagggtgacactggc ccccctggcctgcggggacaccctggcttccccgggacaccggggctgaaaggcttccca gggctgccgggacccaggggcatgccgggcatgccgggtcttgctggcccccctggtccc cgtggagccccgctgatgctgtccagggaggagctgcggcacctaatttattcctctaac cacctgaattacaccgcggtttgggctctgctggacaccctgagccaggagctgcaagcc ctcgtcgagcatcccaacggcaccagaaccaacccggcggccacctgcaaggagctgctg ctggctcaccccagcctgcccgatgggcaatattacatcgaccccaaccagggcagcccc caggatgcactggtggccttctgcaacttcacggcagggggagagacctgcatagccccc atccacaaccaggtccccatcaaggcttggctgagcacctacacctccgaggacaccttc gagtggttcagcaccctgcctggggggtttctgctggagtacgtgggggccagcccggtg cagctccgcttcctccgcctgcacagccacctggccacccagaaggtctcctactcctgc agaccggccctggagcagggccagccccagccggagaaggaaatccgcttcctggctgac tcccgggagcagagctatgcagccagcctgcaaggctgcatgctggacaacgagtcctcc atcactgacaccatcttccagtttgccactgaggagctctccctgctgcccctgcgggac ctggccgtctttcacaatggcgacacctcccaccagtttggtttcacagtcggaccagtt tgcttcagctga

DBGET integrated database retrieval system