Ethanoligenens harbinense: Ethha_0313
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Entry
Ethha_0313 CDS
T01384
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
eha
Ethanoligenens harbinense
Brite
KEGG Orthology (KO) [BR:
eha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
eha03032
]
Ethha_0313
03400 DNA repair and recombination proteins [BR:
eha03400
]
Ethha_0313
Enzymes [BR:
eha01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Ethha_0313
DNA replication proteins [BR:
eha03032
]
Prokaryotic type
DNA Topoisomerases
Ethha_0313
DNA repair and recombination proteins [BR:
eha03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Ethha_0313
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Zn_ribbon_Top1
Auto_anti-p27
Zn_ribbon_RRN7
Toprim_4
Lar_restr_allev
DUF1272
Motif
Other DBs
NCBI-ProteinID:
ADU25899
UniProt:
E6U7W7
LinkDB
All DBs
Position
341773..343890
Genome browser
AA seq
705 aa
AA seq
DB search
MSNLVIVESPAKAHTIKKYLGRGYTVVASMGHVRDLPKSRMGVDIENSFTPKYIPIRGKA
PLIKSLKKEARNSTKIFLATDPDREGEAISWHLANLLGLDEKTALRVTFNEITKTAVKDG
IKNPRSIDLDLVNAYQARRILDRIVGYQLSPFLWKKIRPGLSAGRVQSVAVRLIVDREDE
IRAFVPEEYWTIDASELLAPGSKKPFPAHFHGGLDGKKVEIKSKEEADAILRALGATETP
EGIQVSGEVPFVVRTVKKSERKKSPAPPFTTSTLQQEASRRLGFQARRTMRAAQELYEGV
DVKGYGAIGLITYMRTDSLRIAAEAQQAALAYVGETFGREYLPEKPRFYKSRANAQDAHE
AIRPTMPELSPDQVKESLTADQYKLYKLIWERFIASQMANKVLDTVGVDITAGDCLFKAS
GNTVKFKGFSIVYEMTTDENKESGKPLPVLNEGDELQVQKLDGNQHFTQPPPRYTEASLI
KTLEENGIGRPSTYATTITTILARLYVERDGKQLVPTPLGEVTTKLMREHFADIVDVEFT
AKMENDLDKVETGEENWVQMLTDFYGGFDHTLKKAEEELGDVHMKVPDEETDIVCELCGR
KMVIKNGRYGKFLACPGYPECKNTKPIVQETGAFCPLCGGRVLAKKSKSGKKYFGCEHNP
TCGFMTWDTPLEEKCPQCGGSLFKKRGGQVYCAKEGCGYTREEKK
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaatttggtaatcgtggaatcaccggcgaaggcccatacgatcaaaaaatatctc
gggcgcgggtatacggtcgtcgcgtcgatggggcatgtgcgcgacctgcccaagagccgg
atgggcgtggacatcgaaaacagcttcacacccaaatacattcccatccgcggcaaggcg
cccctcatcaagtccttgaaaaaggaagccaggaacagcaccaagatcttcctcgccacc
gaccccgaccgcgagggggaagccatcagctggcatttggccaacctgctggggctggat
gaaaaaacggcgctgcgcgtcacgttcaacgagatcaccaagaccgccgtcaaggacggc
atcaagaatccgcgctccattgaccttgatctcgtcaacgcctaccaggccagacgtatc
ctcgaccgcatcgtgggctaccagctcagcccgtttttgtggaagaagatccgcccgggc
ctttccgccggtcgtgtgcagtcggtggcggtgcggctgattgtggaccgtgaggatgag
atccgtgcttttgtgcctgaggaatactggaccatcgacgcgtcggagctcctcgcgccc
ggttccaaaaagccgtttcccgctcacttccacggcgggctggacggcaagaaggtcgaa
atcaagagcaaggaggaggccgacgcgatcctcagggcgcttggagccacggaaacaccc
gaaggcatccaagtgtccggcgaggtgccgttcgtggtgcgcaccgtcaaaaagagcgag
cgcaaaaagtcgcccgcgccgccgtttaccacctctacccttcaacaggaggcgtcccgg
cgtctggggttccaggcccggcgcaccatgcgcgccgcacaggaactctatgaaggcgtg
gatgtgaagggctacggcgccatcggtctcatcacctacatgcgtaccgattcgctgcgc
atcgcggccgaggcccagcaggcggcgctcgcctatgtgggcgaaacgttcgggcgggag
tatctgcccgaaaagccgcgcttctacaagtcgcgcgccaacgcacaggatgcgcatgaa
gccatccgccccaccatgccggagctttcgcccgatcaggtgaaagagagcctgacggcc
gaccagtataagctctacaaactgatctgggagcgtttcatcgccagccagatggccaac
aaggtgctcgataccgtcggcgtggacatcaccgcgggggactgcctgttcaaggcgtcg
ggcaacacggtgaagtttaagggcttttccatcgtgtacgagatgacgacggatgagaac
aaggagtctggcaagccgctgcccgtgctgaacgaaggtgacgagctgcaggtgcagaag
ctggacggcaaccagcacttcacccagccgccgccccgctacaccgaggcttcgctcatc
aagacgctggaggaaaacggcatcggccgcccaagcacctatgccaccaccatcaccacc
attctcgcccgcctgtatgtggagcgggacggcaagcagctggtgcccacgccgctgggc
gaagtgaccaccaagctgatgcgtgagcattttgccgacatcgtggatgtggaattcacg
gccaagatggaaaatgatctggataaggtggaaaccggcgaggaaaactgggtgcagatg
ctcaccgatttctacggcgggttcgaccataccctcaaaaaggccgaggaagaactcggg
gacgtgcacatgaaggtgcccgacgaggagaccgacatcgtctgtgagctctgcgggcgc
aagatggtcatcaaaaacgggcgctacggcaaatttctcgcctgcccgggctatccggag
tgcaaaaacaccaagcccatcgtgcaggaaaccggcgcgttctgcccgctctgcggcggg
cgtgtgctggccaaaaaatccaagagcggcaagaaatatttcggctgcgagcataacccc
acctgcgggtttatgacatgggacacgccgctggaggaaaaatgcccccaatgtggcggc
agcctgtttaaaaaacgcggcgggcaggtctactgcgccaaagaaggctgcggatacacc
cgtgaggagaagaaatga
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