Ethanoligenens harbinense: Ethha_0769
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Entry
Ethha_0769 CDS
T01384
Name
(GenBank) helicase, RecD/TraA family
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
eha
Ethanoligenens harbinense
Pathway
eha03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
eha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Ethha_0769
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eha03400
]
Ethha_0769
Enzymes [BR:
eha01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Ethha_0769
DNA repair and recombination proteins [BR:
eha03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Ethha_0769
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
AAA_11
HHH_5
Viral_helicase1
PIF1
Helicase_RecD
nSTAND3
MeaB
DEAD
HHH
AAA_28
UvrD-helicase
AAA_24
T2SSE
SRP54
PhoH
AAA_22
NTPase_1
AAA
DNA_pol_lambd_f
AAA_16
SLFN-g3_helicase
HHH_2
ABC_tran
AAA_29
NPHP3_N
RsgA_GTPase
HerA_C
cobW
Motif
Other DBs
NCBI-ProteinID:
ADU26338
UniProt:
E6U2X1
LinkDB
All DBs
Position
complement(841018..843225)
Genome browser
AA seq
735 aa
AA seq
DB search
MEEQETLRGTVESVVFRNRENGWTVFELACGEELCTVVGHVFEIAEGETLTVKGEWGKHP
SYGRQFKAETFERELPATESAMLRYLSSGAVKGVGPATAKRIVDVFGVDTLDILENHPER
LTEVRGISEKKAQEMSEAYKSQFGVRTCMLFLQQYNVTAAQAIRVWKRFGANAVDIIKRN
PYALCESGLYIGFERADAIAMQMGMDKGDAFRIHAGIAHILRHNLYSGGHTYIPREKLAG
LAQALLGIDADTAASTIDDMAAEGELEDEEIGGRQVLFLPESHRAESYIAGRLLLMRGIR
LPEMGDSGTRIREAEERMGITYARKQREAIETACRNSVMILTGGPGTGKTTTLNAIIHVY
EGMGLKVALAAPTGRAAKRMSEVSGREAKTIHRLLEMSFESEDTARFTRNEKNPLDCDTV
IVDELSMVDVMLLESLLRALKLNCRLVMVGDADQLPPVGPGNALRDMIDSGKVPTVVLDE
IFRQAAKSLIVTNAHRIVRGKMPELARRDGNFFFMPRYTAAQVSTTVVELMHTRLPAAYG
YSPLWDMQVLTPGRKGELGSGAFNKLLQDVLNPAGGGKAERPTVFGVLREGDKVMQVKNN
YDLAWQRDNGEQGAGVYNGDVGLLERIDRRTGTLWVRFDDRLAEYGPDHAEELELAYAVT
VHKSQGSEFKAVVLPLFSGAPMLFYRNLLYTAVTRAKEITILVGRKETIEQMVQNDRRSK
RYTGLCAFLQAGEEP
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atggaagaacaggaaacgctgcgcggcaccgtggaatcggtggtattccgcaacagggaa
aacggctggacggtttttgaactggcctgcggcgaggaactctgcaccgtggtggggcat
gtgttcgagatcgccgaaggcgaaacgctcaccgtcaagggcgaatggggcaagcacccc
tcctacggccggcaattcaaggcggaaaccttcgagcgcgagctgcccgccaccgagtcc
gccatgctgcgttatctctcctccggcgcagtcaaaggggtcggccccgccaccgccaaa
cgcatcgtggacgtgttcggcgtggacacgctggacattcttgaaaaccaccccgaacgg
ctcacggaggtccggggcatctccgaaaaaaaggcgcaggagatgagcgaagcctacaaa
agccagttcggcgtgcgcacctgcatgctgtttctacagcaatacaacgtcacggcagcg
caggctatccgtgtctggaagcgcttcggcgccaatgccgtggacatcatcaagcgcaac
ccctacgccctctgtgaatccggactgtacatcgggtttgagcgcgcggacgccatcgcc
atgcagatgggcatggacaagggcgacgcctttcgcatccacgcgggcatcgcgcacatt
ctgcgccacaacctttacagcggcggccacacctacatcccgcgggaaaaactcgccggg
ctggcgcaggctctgctcggcatcgacgcagacacggccgcctccaccatcgacgatatg
gcggccgagggagaactggaagacgaggagatcggcgggcggcaagtgctgttcctgccg
gaatcacaccgcgccgaaagctacatcgccgggcggctgctgctcatgcgcggcatcagg
ctgccggaaatgggcgactccggcacccgcatccgcgaagcggaggaacgcatgggcatc
acctatgcccgcaagcagcgggaagccatcgagaccgcctgccgcaacagcgtgatgatt
ctcaccggcgggccgggcaccggcaaaaccaccaccctcaacgccatcatccatgtttac
gagggcatggggctgaaagtggcgctggccgcgcccaccggccgggcggccaagcggatg
tcggaggtttcggggcgggaagccaaaaccatccaccgcctgctggaaatgtcgtttgaa
agcgaggataccgcgcgtttcacccgcaacgagaaaaacccgcttgactgcgacaccgtc
atcgtggacgagctttcgatggtggatgtgatgctgcttgaatcgctgctgcgcgcgctg
aaactaaactgccgccttgtgatggtgggcgacgccgaccagttgccgccggtgggcccg
gggaacgccctgcgggatatgatcgactccggcaaggtgcccaccgtggtgctggacgag
attttccgtcaggccgccaaaagcctcatcgtcaccaacgcccaccgcatcgtccgcggc
aaaatgcccgaactcgcccgacgcgacggcaactttttcttcatgccgcgctacaccgcc
gcgcaggtaagcaccaccgtagtggaactgatgcacacccgcctgcccgccgcctacggc
tattccccgctgtgggatatgcaggtgctcacaccgggacgaaaaggtgaactgggctcc
ggcgcgttcaacaaactgcttcaggacgtgctcaaccccgcgggcggcggtaaggcagaa
cgcccgacggtgttcggggtgctacgcgagggcgacaaggtcatgcaggtgaaaaacaat
tacgatctcgcgtggcagcgcgacaacggcgagcagggcgcgggcgtctacaacggcgac
gtgggcctgcttgaacggatcgaccgccgcaccggcacgctgtgggtgcgctttgacgac
cgtctggcggaatacggccccgaccatgcggaggaactggaactggcctatgcggtaacg
gtgcacaaaagtcagggcagcgagttcaaggccgtggtattgccgctgttttcgggcgcg
cccatgctgttctaccgcaacctgctctatacggcggtcacccgcgccaaagaaatcacc
atcctcgtggggcgaaaagagaccatcgagcagatggtgcagaacgaccgccgctccaag
cgatacaccgggctttgcgcgtttttgcaggcgggtgaggaaccatga
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