Ethanoligenens harbinense: Ethha_1738
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Entry
Ethha_1738 CDS
T01384
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
eha
Ethanoligenens harbinense
Pathway
eha03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eha00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Ethha_1738
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eha03019
]
Ethha_1738
Enzymes [BR:
eha01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Ethha_1738
Messenger RNA biogenesis [BR:
eha03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Ethha_1738
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_30
Utp25_C
HP0268
ERCC3_RAD25_C
HEM4
P-loop_SecA
SUa-2TM
Motif
Other DBs
NCBI-ProteinID:
ADU27265
UniProt:
E6U9A6
LinkDB
All DBs
Position
1874013..1875320
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AA seq
435 aa
AA seq
DB search
MQFSQLQLNPSILKALAAAGYEQPTPIQEQSIPYILEKRDLLGTAQTGTGKTAAFAVPIL
DLLCREHGQSTGSRHIRALVLSPTRELAIQIKESFDQYSRFLHLRNTVIFGGVSQIPQVS
RLREGVDILVATPGRLLDLMNQRHVDLSHVSYFVLDEADRMLDMGFIHDVHKVVEKLPQN
RQTLLFSATMPPDIARLADKLLKNPAQVSVAPVSSTAETVEQKLFYVDKKNKKHLLVHLL
KTADMESVLVFSRTKHGANKIVEHLEKAGIPSKAIHGNKSQSARQQALREFKSRKIHVLV
ATDIAARGIDVTELSHVINYDLPNEPETYVHRIGRTGRAGQSGMAFSFCDEEEHDYLRTI
ERLIGKHIPVENDHPYPATMAPTAPPKQGGHGGGRRPAPRNPRTGNAHSGGYRPAGRPGN
PHGGRGGSVRQRTGI
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgcagttttcacagcttcaactgaaccccagcatcctcaaagccctcgcggccgccgga
tatgagcagcccacccccattcaggaacagtccatcccctacattctggaaaagcgcgac
ctgctcggcaccgcgcagaccggcaccggaaagaccgccgcgtttgccgtgcccattctc
gatctgctttgccgggagcatggtcaatccaccggttcgcggcacatccgcgcgctggtg
ctttcccccacccgggagctggccatccagatcaaggagagctttgaccaatacagccgc
ttcctgcacctgcgcaatacggtgatcttcggcggcgtttcgcagatcccgcaggtgagc
aggctgcgcgaaggcgtggatatccttgtcgccacccccggccgcctgctggacctgatg
aaccagcggcatgtcgatctctcgcatgtgtcctattttgtactcgacgaggccgaccgc
atgctggacatgggcttcatccacgacgtgcacaaggtggtggaaaagctcccgcaaaac
cggcagaccctgctgttttccgccaccatgccgccggacattgccaggctggccgacaag
ctgctcaaaaaccccgcgcaggtgtcggtggcgccggtctcctccacggcggaaacggtg
gaacagaaactcttttatgtggataaaaagaacaagaaacacctgctggtgcatctgctg
aaaaccgccgatatggaatcggtgctggtcttttcccgcaccaagcacggcgcgaacaag
attgtggagcacctcgaaaaagcaggcattccgtccaaagccatccacggcaacaagtca
cagagcgcgcgccaacaggcgctgcgcgaattcaagagccggaagattcatgtgctggtg
gccaccgacatcgccgcgcgcggcattgacgtgaccgagctgtcacacgtcatcaactac
gaccttcccaatgagccggaaacctatgtgcaccgcatcgggcgcacggggcgcgccggg
cagagcggcatggccttttcgttctgcgacgaagaagaacacgattacctgcgcaccatt
gagcggttgatcggcaagcacatcccggtggaaaacgatcacccgtatccggctaccatg
gcgcccaccgcgccgccgaaacagggcggacacggcggcggacgcagaccggctccgcgc
aatccgcgcaccgggaacgcacacagcggcggatatcgcccggcggggcgaccgggtaat
ccgcacggcgggcgcggcggctccgtgcgccagcgcaccggcatatga
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