Empedobacter haloabium: E7V67_001585
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Entry
E7V67_001585 CDS
T09755
Symbol
sucD
Name
(GenBank) succinate--CoA ligase subunit alpha
KO
K01902
succinyl-CoA synthetase alpha subunit [EC:
6.2.1.5
]
Organism
ehb
Empedobacter haloabium
Pathway
ehb00020
Citrate cycle (TCA cycle)
ehb00640
Propanoate metabolism
ehb00660
C5-Branched dibasic acid metabolism
ehb00720
Other carbon fixation pathways
ehb01100
Metabolic pathways
ehb01110
Biosynthesis of secondary metabolites
ehb01120
Microbial metabolism in diverse environments
ehb01200
Carbon metabolism
Module
ehb_M00009
Citrate cycle (TCA cycle, Krebs cycle)
ehb_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
ehb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
E7V67_001585 (sucD)
00640 Propanoate metabolism
E7V67_001585 (sucD)
00660 C5-Branched dibasic acid metabolism
E7V67_001585 (sucD)
09102 Energy metabolism
00720 Other carbon fixation pathways
E7V67_001585 (sucD)
Enzymes [BR:
ehb01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
E7V67_001585 (sucD)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CoA_binding
Ligase_CoA
Succ_CoA_lig
DUF1611_N
Motif
Other DBs
NCBI-ProteinID:
WUR13824
LinkDB
All DBs
Position
362959..363840
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AA seq
293 aa
AA seq
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MSILINKDTKVITQGITGKTGQFHTRMCRDYANGKEAFVAGVNPKKAGEDFEGIPIYASV
KEAKSETGATVSVIYVPPAGAAAAIWEAVEAELDLAICITEGIPVRDMMEVKDRMAKAGS
KTLLLGPNCPGLITPDEIKIGIMPGHIHKKGRIGVVSRSGTLTYEAVGQLTALGLGQSSA
VGIGGDPINGLKHIDVMRMFNDDPDTDAVIMIGEIGGPDEANAARWIKDNMKKPVVGFIA
GVTAPPGKRMGHAGALISGGADTAQAKLEIMEACGIKVTKNPSEMARLLKAML
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgtctattctgatcaacaaagacaccaaagtcatcacccagggcatcaccggcaagacc
ggccagttccacacccgcatgtgccgcgactacgcgaacggcaaggaagccttcgtcgct
ggcgtgaacccgaagaaggccggcgaagacttcgaaggcattccaatctacgcctccgtg
aaggaagcgaaatcggaaaccggcgcgaccgtttccgtgatctacgtgccgccagcaggc
gccgccgccgcgatctgggaagccgtcgaagccgaactggacctggctatttgcatcacc
gaaggcattccagtccgtgacatgatggaagtcaaggaccgcatggccaaggccggctcc
aagaccctgctgctgggcccgaactgcccaggcctgatcacgccggacgagatcaagatc
ggcatcatgccaggtcacatccacaagaagggccgtatcggtgtcgtgtcccgttcgggc
acgctgacgtacgaagccgtcggccagctgacggcactgggcctgggccagtcgtccgcg
gtcggtatcggcggcgacccgatcaacggcctgaagcacatcgacgtgatgcgcatgttc
aacgacgatcctgataccgacgcggtcatcatgatcggcgaaatcggcggtccggacgaa
gccaatgccgcacgttggatcaaggacaacatgaagaagccggtggtcggcttcatcgct
ggcgtcaccgctcctccgggcaagcgcatgggccacgccggcgcgctgatctccggcggc
gccgacacggcacaagccaagctggaaatcatggaagcctgcggcatcaaagtgacgaag
aacccgtccgaaatggcgcgcctgctgaaggccatgctgtaa
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