Empedobacter haloabium: E7V67_002650
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Entry
E7V67_002650 CDS
T09755
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
ehb
Empedobacter haloabium
Pathway
ehb02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ehb00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
E7V67_002650
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
ehb02022
]
E7V67_002650
02035 Bacterial motility proteins [BR:
ehb02035
]
E7V67_002650
Two-component system [BR:
ehb02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
E7V67_002650
Bacterial motility proteins [BR:
ehb02035
]
Pilus system
Twitching motility proteins
E7V67_002650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_lid_14
HTH_8
HTH_28
AAA_5
AAA_22
HTH_23
HTH_50
AAA_16
Motif
Other DBs
NCBI-ProteinID:
WUR14023
UniProt:
A0ABZ1UPJ8
LinkDB
All DBs
Position
600381..601817
Genome browser
AA seq
478 aa
AA seq
DB search
MSSPRVLVVDDEDDLRELLEITLLKMGLDVDSAPDLRQARAHLAAGHEYGLVLTDMRLPD
GLGLELVREVAASGRNTPIAVVTAFGSTDNAVVALKAGAFDYVTKPVQLDQLRQLVQSAL
KLNGPAPAAPGEAVDSRLKGQSAAMQALRAQIARLARSMAPIAITGESGSGKELAAREIH
AQSSRADKPFIAVNCGAIPEALMEAEFFGYRKGAFTGAADERDGFFQAAHGGTLMLDEVA
DLPLAMQVKLLRAIQERRVRKIGATAEEPVDVRIVSATHQDLARCVEQGKFRQDLFYRLN
VIELALPPLRERLDDLPVLTEAILARLAAGGPPAVLGPGVLEALRGYSFPGNVRELENVL
ERALAFANDGVIHVEDLALKGARLLDAGQPEPVSVPTPATIAPAEALALVDEASAGMPPL
PDLTVLPSNLPEYLERVEREIIVRALAQTQYNRTQAAQLLGISFRQLRYQMQKLNIKE
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgagttcaccccgggtattggtcgtcgacgacgaagacgacctgcgcgagctgctggaa
atcacgctgctgaagatgggcctggacgtggacagtgcgcccgacctgcgccaggcgcgc
gcccacctggcggcggggcacgaatacggcctggtgctgaccgacatgcgcctgccggac
ggcctggggctggaactggtgcgcgaggtggccgccagcgggcgcaatacgccgatcgcc
gtcgtcacggccttcggcagcacggacaacgccgtggtcgcattgaaggccggcgccttc
gactacgtgaccaagccggtgcagctggaccagctgcgccagctggtccagtcggcgctc
aagctgaacggcccggcgccggcggcgccgggggaagcggtggacagccgcctgaaaggg
cagtcggccgccatgcaggcgctgcgcgcgcaaatcgcgcggctggcgcgctcgatggcg
ccgatcgccatcacgggcgaatcgggcagcggcaaggaactggcggcgcgcgagatccac
gcccagagctcgcgcgcggacaagccgttcatcgccgtcaactgcggcgcgattcccgag
gcgctgatggaggccgagttcttcggctaccgcaagggcgccttcacgggcgcggcggac
gagcgcgacggcttcttccaggccgcccacggcggcaccttgatgctggacgaggtggcg
gacctgccgctggccatgcaggtcaagctgctgcgcgcgatccaggagcggcgcgtgcgc
aagatcggcgccaccgccgaggagccggtggacgtgcgcatcgtcagcgccacccaccag
gacctggcgcgctgcgtcgagcagggcaagttccgccaggacctgttttatcgcctgaac
gtcatcgagctggcgctgccgccgctgcgcgagcggctggacgatctgccggtgctgacg
gaggcgatcctggcgcgcctggcggcgggcgggccgccggccgtgctggggccgggcgtg
ctggaagcgctgcgcggctacagcttcccaggtaatgtgcgcgagctggaaaacgtgctg
gaacgggcgctggcgttcgccaacgacggcgtgatccacgtcgaggacctggcgctgaag
ggcgcgcggctgctcgatgcgggtcagcccgaaccggtttccgtgccgacgccggccacg
atcgcgccggcggaggcgctggcgctggtggacgaggcatcggccggcatgccgccactg
ccggacctgacggtgctgccgtcgaacctgccggaatacctggagcgggtcgaacgcgag
atcatcgtgcgcgcgctggcgcagacgcagtacaaccgcacccaggcggcccagctgctg
gggatcagtttccggcagctgcgttaccagatgcagaagctcaacatcaaggaatag
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