Empedobacter haloabium: E7V67_002745
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Entry
E7V67_002745 CDS
T09755
Name
(GenBank) RNB domain-containing ribonuclease
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
ehb
Empedobacter haloabium
Brite
KEGG Orthology (KO) [BR:
ehb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ehb03016
]
E7V67_002745
Enzymes [BR:
ehb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
E7V67_002745
Transfer RNA biogenesis [BR:
ehb03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
E7V67_002745
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
Motif
Other DBs
NCBI-ProteinID:
WUR14040
UniProt:
A0ABZ1UP06
LinkDB
All DBs
Position
621239..623269
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AA seq
676 aa
AA seq
DB search
MNVFFEESGDFKVGTVLSQAGEAYQVEMASGKRSKVKARDVLLQYEKPAPEVLLGEAKAV
AADVDLDFLWEVAGEEEFGFAELGAEYFGHAPLPHEAAGLILALHSAPIYFHKKGRGRYK
AAPEQTLKAALAGIEKKKQQAIVQQQYVDELKENRLPASMQNIVQQLLFKPDKNTIEYKA
LDAACNELHTSPARLMLAVGGIGSAKDLHMAKFLFENFPKGHGFPDVAVPAAPSDLPVAA
VEAFSIDDVTTTEIDDAFSVVHQPDGKVRIGIHIAAPGLGIKPDDAIDKIARARMSTVYM
PGDKITMLPDSVVDAFTLAEGKTCPALSLYATLDPSDWTVIATETRAELVPIANNLRHNE
LDDVVNEETLASGAGEYPRKAELTLLWGWARHLEAGRMVKREAFGLKPEQNNRVDFNFYV
ENDVVTITRRKRGAPLDKIVAELMIFANSTWGKLMHDHGVPGIYRSQGQGVGGWNAKMQV
RMVTHAAPHQGLGVDQYAWSTSPLRRYTDLVNQWQILACAEKGVMAPLVAPFKQKDANLF
AIVSAFDAAYAAYADFQANMERYWCLRWLGQEDVRQVDAVVLKDEVLRLTDIPLVIRLPG
MPQLARGAAVKLDVLRWDEVDLSIETRLLEVAADQAATDVEFDEEELVGETVPELVPDPD
QPADEKAEAAEQPPEA
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtcttttttgaagaatccggcgatttcaaggtcggaaccgtgctgtcccaggct
ggcgaggcctatcaagtcgaaatggccagcggcaaacgcagcaaggtgaaggcgcgcgac
gtgctgctgcaatacgaaaagcccgcgccggaagtgctgctgggcgaggccaaggcggtg
gcggcggacgtcgatctcgattttctgtgggaagtggcgggcgaggaagaattcggtttc
gccgagctgggcgccgagtacttcggccacgcgccgctgccgcacgaggcggccggcttg
atcctggcgctgcattcggcgccgatctacttccataagaaagggcgcggccgctacaag
gccgcgccggagcagacgctgaaggcggcgctggccggtatcgagaagaaaaagcagcag
gccatcgtgcagcagcagtacgtggacgagctgaaggaaaaccgcctgccggcatcgatg
cagaacatcgtccagcaactgctgttcaagccggacaagaacacgatcgagtacaaggcg
ctggacgcggcctgcaacgagctgcacacgtcgccggcacggctgatgctggccgtgggc
ggcatcggttcggccaaggacctgcacatggcgaagttcctgttcgagaacttcccgaaa
gggcacggcttcccggacgtggccgtgccggccgcgccgagcgacctgcctgtcgccgcc
gtcgaagcgttctccatcgacgacgtgaccaccaccgagatcgacgacgccttctctgtg
gtccaccagccggacggcaaggtgcgcatcggcatccacatcgcggcgccgggcctgggc
atcaagccggacgacgccatcgacaagatcgcgcgcgcgcgcatgtccaccgtgtatatg
ccgggcgacaagatcacgatgctgccggacagcgtggtggacgcgttcaccctggccgag
ggcaagacctgcccggcgctgtcgctgtatgccacgctcgacccgagcgactggaccgtc
atcgcgacggaaacacgcgcggagctggtgccgatcgccaacaacctgcgccacaacgag
ctcgatgacgtggtcaacgaggaaaccctggccagcggcgcaggcgagtacccacgcaag
gccgagctgaccttgctgtggggctgggcgcggcacctggaagcgggccgcatggtcaag
cgcgaggcgttcggcctgaagccggagcagaacaaccgcgtcgatttcaatttctacgtc
gagaacgacgtcgtcacgatcacccgccgcaagcgcggcgcgccgctggacaagatcgtc
gccgagctgatgatcttcgccaacagcacttggggcaagctgatgcacgaccacggcgtg
cccggcatctaccgcagccagggccagggcgtgggcggctggaatgcgaaaatgcaggtg
cgcatggtgacgcacgcggcgccacaccagggcctgggcgtggaccagtacgcgtggagc
acctcaccgctgcgccgctacacggacctcgtcaaccagtggcagatcctggcctgcgcc
gagaagggcgtgatggcgccgctggtggcgccgttcaagcagaaggacgccaacctgttc
gccatcgtctccgctttcgacgccgcctacgcggcctacgccgacttccaggccaatatg
gagcgctactggtgcctgcgctggctgggccaggaagacgtccgccaggtcgatgccgtc
gtgctgaaggacgaagtgctgcgcctgacggacatcccgctcgtcatccgcctgccgggc
atgccgcaactggcgcgcggcgccgccgtcaagctggacgtgctgcgctgggacgaggtg
gacctgtcgatcgaaacgcgcctgctggaagtcgcggccgaccaggcggcgaccgacgtc
gagttcgacgaagaggagctggtgggcgaaacggtgccggaactggtgccggacccggac
cagccggccgacgagaaggccgaggcggccgagcagccgccggaggcctaa
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