Empedobacter haloabium: E7V67_003205
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Entry
E7V67_003205 CDS
T09755
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
ehb
Empedobacter haloabium
Pathway
ehb00550
Peptidoglycan biosynthesis
ehb01100
Metabolic pathways
ehb01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
ehb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
E7V67_003205 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
E7V67_003205 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ehb01011
]
E7V67_003205 (mrdA)
Enzymes [BR:
ehb01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
E7V67_003205 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
ehb01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
E7V67_003205 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PBP_dimer_2
Motif
Other DBs
NCBI-ProteinID:
WUR14124
LinkDB
All DBs
Position
721220..723526
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AA seq
768 aa
AA seq
DB search
MTELKNNERELYLFKVRLSLLGALVFICFALLLARFVWLQVIKHSDYAAQAEDNRIAIVP
IMPNRGLILDRNGVVLARNYSAYTLEITPSKLRIPLEEMIEQLSGLVEVTPKDRRRFRKL
LEESKNFASVPLRTRLTDEEVARFTANRFRFPGVEVQARLFRNYPLGETASHVIGYIGRI
NQNEAKVLEASEDAANYNGTDYIGKEGLEKSYERRLHGVTGYEEVEVSAGGRAIRTLSRT
APTPGSNLILSIDIELQKIAEEAFGEWRGALVAIEPETGDVLAYVSRPGYDPNLFVDGID
AQSWNELNTSLDRPMVNRPLSGTYAPGSTFKPFMALAALELGKRTPSQAIADPGYMYLGN
HKFRDDKVGGHGTVDLRKSIVVSCNTYYYQLGKDMGIDTIHDFMKPFGFGQKTGIDLENE
KTGVLPSQEWKRARYKKNPAAGRWVGGDTISVSNGSGYNSYTPLQIAHAVANLANNGIVM
KPHLVKIIEDGGTKARTLTVPKESYRIPLQQKNIDIIKDAMVGVTSEPGGTAYGVFKNVG
YTVGGKTGTAQVVGIKANEKYNAASLAERLRDNSLFTAFAPADKPKIVLAMVVENAGFGA
AVAAPIARKVLDYWLLGKRPTEKETTPVPKEDAEVLAPVEGPAAEEEAAAALERRAAQQG
GAVGVAATAAPVPAGVTNPRTPAAPAANVSPGLIPERPKTQAVPGVPKSTQPNAPVTPPA
QQPAPSAVLPARPAARAPAQQAVQAAVPAAPPVRAAVQQPAALPPRKE
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atgaccgagttgaagaacaacgagcgcgaactgtacctgttcaaggtgcggctgtcgctg
ctcggcgccctcgttttcatctgcttcgcgctgctgctggcccgcttcgtctggctgcag
gtgatcaaacacagcgactacgccgcccaggcggaagacaaccgcatcgccatcgtgccg
atcatgccgaaccgcggcctgatcctggaccgcaacggcgtggtgctggcgcggaactac
tcggcctatacgctggagatcacgccgtccaagctgcgcattccgctggaggagatgatc
gaacagttgtccggcctcgtcgaggtgacgccgaaggaccgccgccgcttcaggaagctg
ctggaggaatcgaagaatttcgccagcgtgccgctgcgcacccgcctgacggacgaggaa
gtggcccgcttcaccgccaaccgcttccgtttccccggcgtggaagtgcaggcgcgcctg
ttccgcaactatccgctgggcgagacggcgtcgcacgtgatcggctacatcggccgcatc
aaccagaacgaggccaaggtgctggaagcctccgaggatgccgccaactacaacggtacc
gactacatcggcaaggaaggcctggagaagagctacgagcgccgcctgcacggcgtcacc
ggttacgaggaagtggaagtgtcggccggcgggcgggcgatccgcacgctgtcgcgcacg
gcgcccacgccgggcagcaacctgatcctgtcgatcgacatcgagctgcagaagatcgcc
gaggaagcgttcggcgagtggcgcggcgccctggtggcgatcgagccggaaacgggcgac
gtgctggcctatgtgtcgcggccgggctacgaccccaacctgttcgtcgacggcatcgac
gcgcagagctggaacgaactgaatacctcgctggaccggccgatggtgaaccggccgctg
tccggcacctacgcgccaggctccaccttcaagccgttcatggcgctggcggcgctggag
ctgggcaagcgcacgcccagccaggccatcgccgatccgggctatatgtacctcggcaat
cacaagttccgcgacgataaggtgggcggccacggcacggtggacctgcgcaagtcgatc
gtcgtctcctgcaacacctactactaccagctgggcaaggacatggggatcgacacgatc
cacgactttatgaagccgttcggcttcggccagaagacgggtatcgacctggagaacgag
aagacgggcgtgctgccgtcgcaggagtggaagcgggcgcgctacaagaagaatccggcg
gccggccgctgggtcggcggcgacacgatttccgtcagcaacggctcgggctacaactcg
tacacgccgctgcagatcgcgcacgcggtggccaacctggccaacaacggcatcgtcatg
aagccgcacctggtcaagatcatcgaggatggcggtaccaaggcgcgtacgctgacggtg
ccgaaggaaagctaccgcatcccgctgcagcagaagaacatcgacatcatcaaggacgcg
atggtgggcgtgaccagcgagccgggcggcaccgcctacggcgtcttcaagaacgtgggc
tacacggtaggcggcaagaccggtacggcgcaggtggtcggcatcaaggccaacgagaag
tacaacgccgcctcgctggccgagcggctgcgcgacaactccctgttcaccgcgttcgcc
ccggccgacaagccgaagatcgtgctggcgatggtcgtggagaacgccggcttcggcgcc
gccgtcgccgcgccgatcgcgcgcaaggtgctggactattggctgctgggcaaacgcccg
acggaaaaggaaaccacgccggtgccgaaggaggatgcggaagtgctggcgccggtggaa
ggcccggccgccgaggaggaagcggcggccgcgctggagcggcgtgccgcgcagcagggc
ggtgccgtcggcgtggcggccaccgccgcacccgtgccggctggcgtgaccaatccgcgc
acgccggcggcgcccgcggccaacgtgtcgcccggcctgatcccggagcgccccaagacc
caggcggtgccgggagtccccaagtcaacgcaaccgaacgcgcccgtgacgccgccggcg
cagcagccggcgccgtcggctgtcctgcccgcgcggccggccgcgcgcgcgcccgcgcag
caggccgtgcaggcggctgtaccggcagcgccgccggtccgggccgccgttcagcaaccg
gcggcgctgccgccgcggaaggaatag
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