Empedobacter haloabium: E7V67_003490
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Entry
E7V67_003490 CDS
T09755
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
ehb
Empedobacter haloabium
Pathway
ehb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ehb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
E7V67_003490 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ehb03400
]
E7V67_003490 (ruvB)
Enzymes [BR:
ehb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
E7V67_003490 (ruvB)
DNA repair and recombination proteins [BR:
ehb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
E7V67_003490 (ruvB)
RecFOR pathway proteins
E7V67_003490 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
Mg_chelatase
AAA_16
AAA_22
AAA_3
TIP49
AAA_18
AAA_14
Rad17
nSTAND3
AAA_17
RNA_helicase
ABC_tran
AAA_28
NTPase_1
TsaE
AAA_33
bpMoxR
AAA_24
Sigma54_activ_2
NB-ARC
Motif
Other DBs
NCBI-ProteinID:
WUR14179
LinkDB
All DBs
Position
782834..783883
Genome browser
AA seq
349 aa
AA seq
DB search
MSIQTDDFTPQRIIDAAPSSPNEEAIERALRPKLLDEYVGQEKIRSQLEIFITAARGRSE
ALDHTLLFGPPGLGKTTLANIIAREMGVNLRQTSGPVLERPGDLAALLTNLEANDVLFID
EIHRLSPVVEEILYPALEDYQIDIMIGEGPAARSVKLDLQPFTLVGATTRAGMLTNPLRD
RFGIVARLEFYTTEELAKIVTRSAALLKAHIDDEGAHEIARRARGTPRIANRLLRRVRDY
AEVKSNGDITKDIADAALVMLDVDKVGFDVMDRKLLEAVLYKFNGGPVGIGNLAAAIGEA
ADTIEDVLEPYLIQQGYLQRTPRGRVATPAAFQHFGLQPPRASLTGDLW
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgagtatccagaccgacgatttcacaccccagcgcatcatcgacgcggccccgtcctcg
cccaacgaggaagcgatcgaacgcgcactgcgccccaagctgctggacgaatacgtcggg
caggagaagatccgcagccagctggagatcttcatcacggccgcgcgcgggcgcagcgaa
gcgctcgaccacaccttgctgttcggcccaccgggcctgggcaagacgacgctggccaac
atcatcgcgcgcgagatgggcgtgaacctgcgccagacctccggccccgtgctggaacgc
ccgggcgacctggccgcgctgctgacgaacctggaagcgaacgacgtgctgttcatcgac
gagatccaccgcctctcgcccgtggtcgaggagatcctgtatccggcactggaggactac
cagatcgacatcatgatcggcgagggcccggccgcgcgctcggtgaagctggacctgcag
ccgttcacgctggtgggcgccaccacgcgcgccggcatgctgaccaatccgctgcgcgac
cgcttcggcatcgtcgcccggctggagttctatacgacggaagaactggcgaagatcgtc
acgcgcagcgccgcgctgctgaaggcccacatcgacgacgagggcgcgcacgagatcgcg
cgccgcgcccgtggcacgccccgtatcgccaaccgcctgctgcgccgcgtgcgcgactac
gcggaggtgaagagcaacggcgacatcacgaaggacatcgcggacgcggcgctggtgatg
ctggacgtggacaaggtcggcttcgacgtgatggaccgcaagctgctggaagcggtgctg
tacaagttcaacggcggcccggtcggcatcggcaacctggccgccgccatcggcgaggcg
gcggacacgatcgaggacgtgctggaaccctacctgatccagcaaggctacctgcagcgc
accccgcgcggccgggtagccacgccggccgccttccagcacttcggcctgcagccgccg
cgcgcgtcgctgaccggggacctgtggtaa
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