Empedobacter haloabium: E7V67_003605
Help
Entry
E7V67_003605 CDS
T09755
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
ehb
Empedobacter haloabium
Pathway
ehb03030
DNA replication
ehb03410
Base excision repair
ehb03420
Nucleotide excision repair
ehb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ehb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
E7V67_003605 (polA)
03410 Base excision repair
E7V67_003605 (polA)
03420 Nucleotide excision repair
E7V67_003605 (polA)
03440 Homologous recombination
E7V67_003605 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ehb03032
]
E7V67_003605 (polA)
03400 DNA repair and recombination proteins [BR:
ehb03400
]
E7V67_003605 (polA)
Enzymes [BR:
ehb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
E7V67_003605 (polA)
DNA replication proteins [BR:
ehb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
E7V67_003605 (polA)
DNA repair and recombination proteins [BR:
ehb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
E7V67_003605 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
E7V67_003605 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
WUR14200
LinkDB
All DBs
Position
807843..810593
Genome browser
AA seq
916 aa
AA seq
DB search
MQKTLLLVDGSSYLYRAFHALPDLRSPDGHPTGAMHGMVNMLRRLRADYPAAYIACVFDA
KGKTFRDDLYPEYKATRASMPADLSLQIEPIHEAVRAMGWPILMVDGVEADDVIGTLAVT
AEKNGMDVIISTGDKDLAQLVTPHVTLINTMSNEKLDEAGVLAKFGVPPNRIIDYLTLIG
DTVDNVPGVAKCGPKTAVKWLTQYDSLDGVIANADKITGAVGANLKAALEWLPKGRELIT
VKTDCDLSGHMMSISESLVAKDEDHESLLSFFTKYGFKTLLRELQALTPSAKVPGQTTPA
APEGATGDMFAQPPANVKYDTVLTEAQLDEWIARITQAELVSLDTETTSLEPMTAQLVGI
SLATEPGLACYIPVAHRYAGVPEQLPRELVLEKLKPWLEDASKAKLGQNLKYDAHIFANH
GVTLRGVVHDTLLQSYVFESHRTHDMDSLAMRHLNHKTIPFEDVCGKGANMICFDQVELQ
RATDYAAEDADITLRLHLAMHGHVAGDEGLTAIYNKIELPTAVVLQKIERNGVLIDAGLL
ATQSEELGARIVELEQKAYELAEQPFNLGSPKQIGEIFFNKLKLPVVKKTPSGAPSTDEE
VLQKLAEDYPLPKILLEYRGMAKLKSTYTDKLPKMINPQTGRVHTNYAQAVAVTGRLASN
DPNLQNIPIRTAEGRRIREAFVAPAGSHIVSADYSQIELRIMAHISGDAAMLRAFAEGVD
IHRATAAEIFGVPPDEVNSEQRRYAKVINFGLIYGMSAFGLAANLGIDRAAAQNYIDRYF
ARFSGVKQYMDETRLEAKANGYVKTVFGRRLWLPEINSPNGPRRQAAERAAINAPMQGTA
ADLIKLAMIAVQDWLEKENLKSRMIMQVHDELVLEVPDDELQLVRETLPQLMAGVAQLKV
PLVAEVGVGRNWEEAH
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaaaccctgctgttagtcgacggttccagttacctctaccgtgccttccacgcg
ctgcccgacctgcgcagtccggatggccacccgaccggcgccatgcacggcatggtcaac
atgctgcgccgcctgcgcgccgactacccggccgcctatatcgcctgcgtcttcgatgcc
aagggcaagaccttccgcgacgatctttatccggaatacaaggccacgcgcgcgtcgatg
ccggccgacctgtcgctgcagatcgagccgatccacgaagccgtgcgcgcgatgggctgg
ccgatcctgatggtcgatggcgtcgaggcggacgacgtgatcggcacgctggccgtgacg
gccgagaagaacggcatggacgtcatcatctcgacgggcgacaaggacctggcccagctg
gtcacgccgcacgtcacgctgatcaatacgatgagcaacgaaaagctggacgaggcgggt
gtgctggccaagttcggcgtgccgccgaaccgcatcatcgactatctgaccctgatcggc
gacacggtggacaacgtgcccggcgtggccaagtgcgggccgaagacggccgtcaagtgg
ctgacgcaatacgacagcctcgatggcgtgatcgccaacgccgacaagatcacgggcgcc
gtcggcgccaacctgaaggcggcgctggaatggctgcccaagggccgcgagctgatcacc
gtgaagaccgattgcgacctgtccggccacatgatgtcgatcagcgaatcgctggtggca
aaggacgaggaccacgagtcgctgctgagctttttcaccaaatacggcttcaagacgctg
ctgcgcgagctgcaggcgctgacgccgtcggccaaggtgccgggccagaccacgccggcg
gcgccggaaggcgcgaccggcgacatgttcgcccagccacccgccaacgtgaaatacgac
acggtgctgaccgaggcccagctggacgaatggatcgcccgcatcacgcaagccgaactg
gtgtcgctggacacggaaacgacgtcgctcgagccgatgacggcgcaactggtcggcatc
tcgctggcgacggagccgggcctggcctgctatatcccggtagcgcaccgctacgcgggc
gtgccggaacagctgccccgcgagctggtgctggaaaagctgaaaccctggctggaagac
gccagcaaggccaagctgggccagaacctgaaatacgacgcgcacatcttcgccaaccac
ggcgtgaccctgcgcggcgtggtgcacgacacgctgctgcaatcgtacgtgttcgagtcg
caccgcacgcacgacatggacagcctggcgatgcgccacctgaaccacaagaccatcccg
ttcgaggacgtgtgcggcaagggcgccaacatgatctgcttcgaccaggtcgaactgcag
cgcgccaccgactacgcggccgaggatgcggacatcaccttgcgcctgcacttggcgatg
cacggccacgtggccggcgacgagggcctgacggcgatctacaacaagatcgagctgccg
acggccgtggtgctgcaaaagatcgagcgcaacggcgtattgatcgacgccggcctgctg
gccacgcagtcggaagagctgggcgcgcgcatcgtcgaactggaacagaaggcgtatgag
ctggccgagcagccgttcaacctgggttcgcccaagcagatcggcgagatcttcttcaac
aagctgaaactgccggtggtgaagaagacgccgagcggcgcgccgtcgacggacgaggaa
gtgctgcagaagctggccgaggactatccgctgccgaagatcctgctggaataccgtggc
atggccaagctgaagtccacctacacggacaagctgccgaagatgatcaatccgcagacg
ggccgggtgcacaccaactacgcccaagcggtggcggtgacggggcggctggcgtcgaac
gacccgaacctgcagaacatcccgatccgcacggccgagggccgccgcatccgcgaggcc
ttcgtggcgccggcaggcagccatatcgtctcggccgactattcgcagatcgagctgcgc
atcatggcgcacatctcgggcgacgcggcgatgctgcgcgcgttcgccgaaggcgtcgac
atccaccgtgccacggcggccgagatcttcggcgtcccaccggacgaggtgaacagtgag
cagcgccgctatgcgaaggtcatcaatttcggcctgatctacggcatgagcgcgttcggc
ctggccgccaacctgggcatcgaccgcgccgccgcgcagaactacatcgaccgctatttt
gcgcgcttctccggcgtcaagcagtacatggacgaaacgcgcctggaagcgaaggcgaac
ggctacgtcaagacggtgttcggccgccgcctgtggctccccgagatcaactccccgaac
ggtccgcgccgccaggccgcggagcgggccgcgatcaacgcgccgatgcagggcacggcg
gcggacctgatcaagctggcgatgatcgccgtgcaggactggctggaaaaggaaaacctg
aagtcgcgcatgatcatgcaggtgcacgacgaactggttctggaagtgccggacgacgag
ctgcagctggtgcgggagacgctgccgcagctgatggccggcgtggcgcagttgaaggtg
ccgctggtcgccgaagtcggcgtggggcggaactgggaggaggcgcactga
DBGET
integrated database retrieval system
