Empedobacter haloabium: E7V67_004595
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Entry
E7V67_004595 CDS
T09755
Name
(GenBank) pseudouridine-5'-phosphate glycosidase
KO
K16329
pseudouridylate synthase [EC:
4.2.1.70
]
Organism
ehb
Empedobacter haloabium
Pathway
ehb00240
Pyrimidine metabolism
ehb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ehb00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
E7V67_004595
Enzymes [BR:
ehb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.70 pseudouridylate synthase
E7V67_004595
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Indigoidine_A
DUF4715
ssDBP
Motif
Other DBs
NCBI-ProteinID:
WUR14388
LinkDB
All DBs
Position
complement(1019045..1019965)
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AA seq
306 aa
AA seq
DB search
MQQYLSFSPEVAAARAAGKPIVALESTIISHGMPYPQNVQTAREVEQIIRDGGAVPATIA
VIDGKICVGLTDEQLELLGQSPEAMKVSRRDLPYVLSQHKLGATTVAATMICAQLAGIPV
FVTGGIGGVHRGAETSFDISADLQELARTNVAVVCAGVKSILDIGLTLEYLETHGVPVVS
VGQPGFPAFFTRASGFNADFQLDTPAEQAAFVHTKWRLGLNGGVVVSNPVPESEAMPKEE
IDAITVQALEEAEQQGVTGKKVTPFLLARIKTLTEGRSLATNIALVKNNARVGAALARAM
AEYPST
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgcaacaatacctctccttttcgcccgaagtggccgccgcgcgcgccgccggcaagcct
atcgtcgcgcttgaatcgacgatcatctcgcacggcatgccgtacccgcagaacgtgcag
accgcacgcgaagtcgagcagatcatccgggacggcggcgccgtgcccgcgacgatcgcc
gtcatcgacggcaagatctgcgtcggcctgaccgacgagcagctcgagctgctgggccag
tcgcccgaggcgatgaaggtcagccggcgcgacctgccctatgtgctgtcgcagcacaag
ctgggtgccaccacggtggccgcgacgatgatctgcgcccaactggccggcatccccgtc
ttcgtcacgggcggcatcggcggcgtgcaccgcggcgccgagaccagcttcgacatctcg
gccgacctgcaggaactggcccggaccaacgtggccgtcgtttgcgccggtgtgaaatcg
atcctcgacatcggcctgaccctggaatacctggaaacgcatggcgtgccggtggtcagc
gttggccaacccggcttcccggccttcttcacgcgcgcgagcggcttcaacgccgacttc
cagctggacaccccggccgagcaggcggcgttcgtccacaccaagtggcgcctgggcctg
aacggcggtgtcgtcgtcagcaatccggtaccggagagcgaggccatgccgaaggaagag
atcgacgcgatcaccgtgcaggccctggaggaagccgaacagcagggtgtgacgggcaag
aaggtgacaccgttcctgctggcccgcatcaagaccttgaccgaaggccgcagcctggcg
acgaacatcgcactggtcaagaacaacgcccgcgtgggcgccgcgctggcgcgcgcgatg
gcggagtatccgagcacataa
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