Empedobacter haloabium: E7V67_005265
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Entry
E7V67_005265 CDS
T09755
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ehb
Empedobacter haloabium
Brite
KEGG Orthology (KO) [BR:
ehb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ehb03016
]
E7V67_005265 (truB)
Enzymes [BR:
ehb01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
E7V67_005265 (truB)
Transfer RNA biogenesis [BR:
ehb03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
E7V67_005265 (truB)
Prokaryotic type
E7V67_005265 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
WUR14517
UniProt:
A0ABZ1UPB9
LinkDB
All DBs
Position
1202582..1203505
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AA seq
307 aa
AA seq
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MTQQKVKRVRDLVDGVLLLDKPVGLSSNDALIKAKRILNAKKAGHTGTLDPFATGLLPLC
FGEATKFSQDLLEADKTYVTTVHLGVRTDTGDTEGQVLETLPVDVTVEQIEAVLARFRGL
IAQVPPMYSALKRDGKPLYEYARAGVVLEREARNVTIHKLELLGYEAPFLRLEVTCSKGT
YIRVLGEDIGAALGCGAHLNALRRIGVGALRAEQMITAEQLVAHPAPLELLAPVDALLRS
FPKVDLTPELARRFLQGQRLPLGKEPEVVTPAPYEGRVRVYQGTRLLGTGVLGEWAILAP
ERLIAAG
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgacgcagcaaaaagtaaaacgggtgcgcgacctggtggacggcgtgctgctgctggat
aaaccggtggggctgtcgtccaacgacgcgctgatcaaggccaagcgcatcctgaacgcg
aagaaggcgggccataccggcacgctcgatccgttcgccaccggcctgttgccgctgtgc
ttcggcgaagccaccaagttctcgcaggacctgctggaggcggacaagacctacgtgacg
accgtccacctgggcgtgcgcacggacacaggcgacaccgaaggccaggtgctggagacg
ctgccggtggatgtgacggtcgagcagatcgaggccgtgctggcccgtttccgtggcctg
atcgcgcaggtgccgccgatgtactcggcgctcaagcgcgacggcaagccgctgtacgag
tacgcccgcgccggcgtggtgctggagcgcgaggcgcgcaacgtcacgatccacaagctg
gagctgctcgggtacgaggcaccgttcctgcggctggaggtcacgtgcagcaagggcact
tacatccgcgtgctgggcgaggacatcggcgccgcactgggctgcggcgcgcacctgaat
gcgctgcggcgcatcggcgtcggcgccctgcgcgccgagcagatgatcacggcggagcag
ctggtggcgcatccggcgccgctggagttgctggcaccggtcgacgcgttgctgcgctcc
ttcccgaaggtcgacctgacaccggagctggccaggcgcttcctgcaaggccagcggctg
ccgctggggaaggagccggaggtcgtcacgccggcgccttacgaggggcgggtgcgtgtg
taccagggtactcgcttgctgggcacgggcgtgctgggcgagtgggcgattctggcgccg
gagcgcttgatcgcggcgggataa
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