Empedobacter haloabium: E7V67_007945
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Entry
E7V67_007945 CDS
T09755
Name
(GenBank) Ada metal-binding domain-containing protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
ehb
Empedobacter haloabium
Pathway
ehb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ehb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
E7V67_007945
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ehb03000
]
E7V67_007945
03400 DNA repair and recombination proteins [BR:
ehb03400
]
E7V67_007945
Enzymes [BR:
ehb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
E7V67_007945
Transcription factors [BR:
ehb03000
]
Prokaryotic type
Helix-turn-helix
AraC family
E7V67_007945
DNA repair and recombination proteins [BR:
ehb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
E7V67_007945
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
WUR15028
UniProt:
A0ABZ1USU9
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All DBs
Position
complement(1838063..1839442)
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AA seq
459 aa
AA seq
DB search
MDLTDRISCHRAVQTRDARFDGRFFVGVTSTGIYCRPICPARTPKLENCRFYPSAAAAQQ
SGFRPCLRCRPESAPGDGAWLGSSATVARALALLADRGQHDEPALTAIAARLEVSMRQLR
RLFQQHLGASPVAVLQTRRILVAKQLIHETSLPMTAVAMAAGFGSIRRFNETFQALYGRP
PSALRGRAATAADSAGEIVLRLRYRPPYDWPALLAALPALPGVAVTAAGEYRRSLRCATG
HGTVRVWHEPARHNLHVGLRLDDIRTLPDTLARVARTFDTAADSAAIDAHLAADPLLAPL
VAARPGLRVPGPWDPFEAAVLALLPPAAVPDLLARCADALAPALQGPGLTQLFPSAARIA
ATDLTALPAPAERVRALQVLAHAVERDPAFLPPGPVPAAAQLGALLGIDPALARLIAAAI
GTGTDAFACAEPPLAARSEAWQPWCAYAARHLSLTKEIA
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atggacttaaccgaccgcatcagctgccatcgggccgtgcagacgcgcgacgcgcgcttc
gatggccgcttcttcgttggcgtcacctcgacgggcatctactgccgccccatctgcccg
gcacgcacgcccaagctcgagaactgccgcttctacccgtccgccgccgcggcccagcag
tccggctttcgcccctgcctgcgctgccggccggagtccgcacccggcgacggcgcctgg
ctcggcagttccgccacggtcgcgcgcgccctcgcgctgctggccgaccgcggccagcac
gacgaaccggcgctgacggccatcgcggctcggctggaagtcagcatgcgccagctgcgc
cgcctgttccagcaacacctgggtgcctcgcccgtggcggtgttgcagacccgccgcatc
ctcgttgccaagcagctgatccacgaaacgagcctaccgatgacagccgtggcgatggcg
gccggcttcggcagcatccggcgcttcaacgaaacattccaggcgctgtacgggcggccg
cccagtgcgctgcgcggtcgtgccgccaccgctgccgacagcgccggcgaaatcgtgctg
cgcctgcgctaccggccgccgtatgactggccggcactgctggcggccctgcccgcgtta
cccggcgtcgcggtcacggccgctggcgagtaccggcgcagcctgcgttgcgccaccggg
catggcaccgtgcgcgtgtggcacgagccggcgcgccacaacctgcacgtgggcttgcgg
ctggacgatatccgcacgcttcccgacaccctggcacgcgtggcccgcacgttcgacacg
gcggcggacagcgcggccatcgatgcgcacctggcggcggacccgctgctggccccgctc
gtcgccgcccggcccggcctgcgcgtgccgggcccgtgggacccgttcgaagccgccgtg
ctggccctgctgccgccggccgccgtgccggacctgctggcccgctgcgccgacgcgctg
gcgccggcgctgcaggggcccgggttgacgcagctgttccccagcgcggcccgcatcgcc
gccaccgacctgaccgccctgcccgcacctgccgagcgcgtgcgggcactgcaggtgctg
gcgcacgccgtcgagcgcgacccggctttcctgccgcccggcccggtgcccgccgctgcg
cagctgggcgcgctgctaggcatcgacccagccctggcacggctgatcgccgccgccatc
ggtaccggcaccgatgccttcgcctgcgccgagccgccgctggccgcccgcagcgaagcg
tggcagccctggtgcgcctatgccgcccgccacctttcattgaccaaggagatcgcatga
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