Empedobacter haloabium: E7V67_008650
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Entry
E7V67_008650 CDS
T09755
Name
(GenBank) L,D-transpeptidase family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
ehb
Empedobacter haloabium
Brite
KEGG Orthology (KO) [BR:
ehb00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ehb01002
]
E7V67_008650
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ehb01011
]
E7V67_008650
Peptidases and inhibitors [BR:
ehb01002
]
Cysteine peptidases
Family C82
E7V67_008650
Peptidoglycan biosynthesis and degradation proteins [BR:
ehb01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
E7V67_008650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
WUR15159
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All DBs
Position
1983251..1984855
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AA seq
534 aa
AA seq
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MTGTSWLSRALPWRAVRHGALLLLICVGGGAVAQEQDPGQIRALLADQAAQAPARREDAA
VLARFYAERGYRLAWRASADVQAALALLDGAADHGLEPADYAAARDAVARLGGGDASAAT
GADVMLSRAVLRYLVDLHAGRTRGTVLSSDARPEQRFDAAALLQEALAGHGLAGLEARAV
PHFGLYGRLQDALRRYRAMAAQGDTAVPASVAPRTAGADARDSAALRRRLVELGDLADGP
GDDGQLVAALRRFQQRHGLGADGIAGRATLAALNVPLRERVRQLAFALERLRWLPALPER
RVVVINLPSYRLWAVDRHAGEARPVLDMPVIVGKALRTPTPVFIGTMRQVEFNPYWNVPP
SILRNELLAHVARDPDYLRRNNMEVVLAGAATQDVDAAILGRLRSGAARVRQRPGPDNAL
GAVKFVLPNSMNIYLHGTPARALFERARRDFSHGCIRVQDPAALAGFVLVEQGWDAAAVA
QAMAPGTTRVVRLQAPLPVVIFYTTAIAEADGTVTFLADVYGLDAALARRWDAP
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgacgggaacgtcctggctgtcgcgggccttgccgtggcgcgccgtccggcacggcgct
ctgctgctgctcatctgcgtgggtggcggcgccgtcgcgcaagaacaggaccccgggcaa
atccgcgcattgctggctgaccaggcggcgcaggcgccggcccggcgcgaggatgccgcc
gtgctggcgcgcttctacgcggagcgcggctaccgcctggcctggcgcgcatccgccgac
gtgcaggccgcgctggccctgctggacggcgcggcggaccatggcctggagccggccgat
tatgcggcggcgcgggatgccgtggcgcggctgggtggcggcgacgcgagcgccgccacg
ggtgccgacgtcatgctcagccgcgctgtcctgcgttatctggtcgacctgcatgccggc
cgcacccgcggcacggtgctgtcgtccgacgcacggcccgagcaacgtttcgacgcggcc
gcgctgctgcaggaagcgcttgccggtcatggtctggccgggctggaggcccgagccgtg
ccgcatttcggcttgtatggccggctgcaggacgcgctgcgccgctaccgtgcgatggcc
gcgcagggcgacacggcggtgccggccagtgtcgcgccgcgtaccgctggggccgacgca
cgcgacagcgccgccttgcgacgccggctggtcgagctgggcgacctggccgacgggcca
ggtgacgacgggcagctggtcgcggcgctgcggcgcttccagcagcgtcacggcctgggc
gcggacggcattgccggtcgcgccacgctggccgcgctgaacgtgccgctgcgcgagcgt
gtgcgccaactggccttcgcgctggaacggctgcgctggctgccggcgttgccggaacgg
cgcgtggtggtgatcaacctgccgtcgtaccggctgtgggcggtcgaccgtcacgccggg
gaggcacggccggtgctggacatgccggtcatcgtcggcaaggccctgcgcacgccgacg
ccggtgttcatcgggacgatgcgccaggtcgagttcaatccgtactggaacgttcccccc
agcatcctgcgcaacgagttgctggcgcacgtggcgcgcgatccggattatctgcgccgc
aacaatatggaagtggttctggctggcgccgcgacgcaggacgtcgatgccgcaatcctg
ggccgcctgcgcagcggcgcggcgcgggtgcggcagcgcccggggcccgacaacgcgctg
ggcgccgtcaagttcgtgctgccgaactcgatgaacatctacctgcacggcacgccggcg
cgcgcgctgttcgaacgtgcccggcgcgatttcagccacggctgcatccgcgtgcaggac
ccggccgcgctggccggcttcgtgctggtcgagcagggctgggacgcggccgcggtggcg
caggcgatggcgccgggcacgacgcgggtggtccgtctgcaggcgccgttgccggtagtg
atcttctatacgacggcgatcgcggaagccgatggcacggtaacgttcctggcggacgtg
tacgggctggatgcggcgctggcgcggcgctgggatgcgccctga
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