Empedobacter haloabium: E7V67_009135
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Entry
E7V67_009135 CDS
T09755
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
ehb
Empedobacter haloabium
Pathway
ehb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ehb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
E7V67_009135
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ehb03400
]
E7V67_009135
Enzymes [BR:
ehb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
E7V67_009135
DNA repair and recombination proteins [BR:
ehb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
E7V67_009135
BRITE hierarchy
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
WUR15251
LinkDB
All DBs
Position
2092186..2093193
Genome browser
AA seq
335 aa
AA seq
DB search
MSELSQRSAVFLDAMGVGPQWLLRDRPARVPEMADEVMADEVMADNVRTDDVMTGGAMAE
QVDVAATEPVPAPAAMPPSVAPAADTAWFDNAPPAPSTAPALKQPAKKIEPARTQVPSAS
EDTAWFDAVPAPAARPAATSAARAATDEEIASMDWRELQSAVRRCTRCDLCHTRRAAVPG
RGDEAARWLVLGPAPTTADEDEATAFAGDPGQLLENMLRAVDLSTGGGAYVTTLVKCRPA
DDAGVDRLPTPSELAACRPYLQRELELTEAGLVLTLGGVTAKALLGAAARGKVLRHGELP
VVATFHPADLLRRPEDKARAWADLCLARSAHAGRR
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagctgtcgcagcgcagtgccgtgttcctggatgcgatgggcgtggggccgcaa
tggctgttgcgcgaccggcccgcgcgcgtgccggagatggccgatgaagtgatggccgat
gaagtgatggccgataacgtgaggaccgatgacgtgatgaccggcggcgcgatggccgag
caagtcgacgtcgcggcgaccgaacccgtgccggcacccgcggcgatgccgccatccgtg
gcgccggcggccgacaccgcctggttcgacaacgcgccgccggcgccctcgacggcgccg
gcactgaagcagccggccaagaagatcgagcccgcccgcacgcaggttcccagcgccagc
gaggacacggcctggttcgacgccgtgccggcgccggccgcgcgtcccgccgccacgagc
gcggcccgcgccgccacggacgaggaaatcgcatcgatggactggcgcgagctgcagtcc
gccgtgcgccgctgcacccgctgcgacctgtgccacacgcgccgcgcggccgtgccgggc
cgcggcgacgaggccgcgcgctggctcgtgctgggccccgcgccgacgacggcggacgaa
gacgaggcaaccgcgttcgccggcgacccgggccagctgctggagaacatgctgcgcgcc
gtcgacctctcgaccggcggcggcgcctacgtcaccaccctggtcaaatgccgccccgcc
gatgacgcgggcgtggaccggctgccgaccccaagcgaactggcggcctgccggccctac
ctgcagcgcgaactggagctgaccgaggccgggctggtgctgaccctgggcggcgtcacg
gccaaggcgctgctgggcgcggccgcgcgcggcaaggtgctgcgccatggcgagctgccc
gtcgtggcgacattccacccggccgacctgctgcgccggccggaagacaaagcccgggcc
tgggccgacctgtgcctggcccgctccgcccatgccggccggcgctga
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